RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	CD44	P16070	742 aa	Known RBP	5.06	□□□□□ -1.6
CARS2-223	ENST00000540785	DPYSL4	O14531	572 aa		5.05	□□□□□ -1.6
CARS2-223	ENST00000540785	KDM4C	Q9H3R0	1056 aa		5.05	□□□□□ -1.6
CARS2-223	ENST00000540785	SPDYE16	A6NNV3	312 aa	Predicted RBP	5.04	□□□□□ -1.6
CARS2-223	ENST00000540785	TRIM66	O15016	1216 aa		5.04	□□□□□ -1.6
CARS2-223	ENST00000540785	PDE4D	Q08499	809 aa		5.04	□□□□□ -1.6
CARS2-223	ENST00000540785	PIP4P2	Q8N4L2	257 aa		5.04	□□□□□ -1.6
CARS2-223	ENST00000540785	GPHN	Q9NQX3	736 aa	Predicted RBP	5.04	□□□□□ -1.6
CARS2-223	ENST00000540785	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	5.04	□□□□□ -1.6	6e-8	■□□□□ 8.4
CARS2-223	ENST00000540785	ZMYND15	Q9H091	742 aa		5.03	□□□□□ -1.6
CARS2-223	ENST00000540785	CHRDL2	Q6WN34	429 aa		5.02	□□□□□ -1.61
CARS2-223	ENST00000540785	TMC2	Q8TDI7	906 aa		5.02	□□□□□ -1.61
CARS2-223	ENST00000540785	MS4A3	Q96HJ5	214 aa		5.02	□□□□□ -1.61
CARS2-223	ENST00000540785	TRPC6	Q9Y210	931 aa		5.02	□□□□□ -1.61
CARS2-223	ENST00000540785	NUTM2F	A1L443	756 aa		5.01	□□□□□ -1.61
CARS2-223	ENST00000540785	EMILIN3	Q9NT22	766 aa		5.01	□□□□□ -1.61
CARS2-223	ENST00000540785	GRXCR2	A6NFK2	248 aa		5	□□□□□ -1.61
CARS2-223	ENST00000540785	DSG2	Q14126	1118 aa		5	□□□□□ -1.61
CARS2-223	ENST00000540785	RSPH6A	Q9H0K4	717 aa		5	□□□□□ -1.61
CARS2-223	ENST00000540785	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.99	□□□□□ -1.61
CARS2-223	ENST00000540785	MAP3K9	P80192	1104 aa		4.99	□□□□□ -1.61
CARS2-223	ENST00000540785	PDIA6	Q15084	440 aa		4.99	□□□□□ -1.61
CARS2-223	ENST00000540785	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.98	□□□□□ -1.61
CARS2-223	ENST00000540785	TTLL13P	A6NNM8	815 aa		4.98	□□□□□ -1.61
CARS2-223	ENST00000540785	TIE1	P35590	1138 aa		4.98	□□□□□ -1.61
CARS2-223	ENST00000540785	DPY19L2	Q6NUT2	758 aa		4.98	□□□□□ -1.61
CARS2-223	ENST00000540785	PLPP6	Q8IY26	295 aa		4.98	□□□□□ -1.61
CARS2-223	ENST00000540785	FAM117A	Q9C073	453 aa		4.98	□□□□□ -1.61
CARS2-223	ENST00000540785		G3V3G9	751 aa		4.97	□□□□□ -1.61
CARS2-223	ENST00000540785	FOXK1	P85037	733 aa		4.97	□□□□□ -1.61
CARS2-223	ENST00000540785	UBTF	P17480	764 aa	Known RBP	4.96	□□□□□ -1.62
CARS2-223	ENST00000540785	MICALL2	Q8IY33	904 aa		4.96	□□□□□ -1.62
CARS2-223	ENST00000540785	DDRGK1	Q96HY6	314 aa		4.96	□□□□□ -1.62
CARS2-223	ENST00000540785	ARID3A	Q99856	593 aa		4.96	□□□□□ -1.62
CARS2-223	ENST00000540785	TRIM35	Q9UPQ4	493 aa		4.96	□□□□□ -1.62
CARS2-223	ENST00000540785	IRF6	O14896	467 aa		4.95	□□□□□ -1.62
CARS2-223	ENST00000540785	MAP2K5	Q13163	448 aa		4.95	□□□□□ -1.62
CARS2-223	ENST00000540785	ILDR1	Q86SU0	546 aa	Predicted RBP	4.95	□□□□□ -1.62
CARS2-223	ENST00000540785	CCDC102A	Q96A19	550 aa		4.95	□□□□□ -1.62
CARS2-223	ENST00000540785	BMP2K	Q9NSY1	1161 aa	Predicted RBP	4.95	□□□□□ -1.62
CARS2-223	ENST00000540785	GNPAT	O15228	680 aa		4.94	□□□□□ -1.62
CARS2-223	ENST00000540785	GPR37	O15354	613 aa		4.94	□□□□□ -1.62
CARS2-223	ENST00000540785	UPF1	Q92900	1129 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
CARS2-223	ENST00000540785	PODXL2	Q9NZ53	605 aa		4.94	□□□□□ -1.62
CARS2-223	ENST00000540785	C2orf72	A6NCS6	295 aa		4.93	□□□□□ -1.62
CARS2-223	ENST00000540785	FCHSD2	O94868	740 aa		4.93	□□□□□ -1.62
CARS2-223	ENST00000540785	TTLL12	Q14166	644 aa	Predicted RBP	4.93	□□□□□ -1.62
CARS2-223	ENST00000540785	PLEKHG3	A1L390	1219 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	C19orf67	A6NJJ6	358 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	TBC1D12	O60347	775 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	OSBP	P22059	807 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	FLII	Q13045	1269 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	HIC1	Q14526	733 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	PARP9	Q8IXQ6	854 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	DDX12P	Q92771	950 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	BOLA1	Q9Y3E2	137 aa		4.92	□□□□□ -1.62
CARS2-223	ENST00000540785	APBB1	O00213	710 aa		4.91	□□□□□ -1.62
CARS2-223	ENST00000540785	AMHR2	Q16671	573 aa		4.91	□□□□□ -1.62
CARS2-223	ENST00000540785	GALR2	O43603	387 aa	Predicted RBP	4.9	□□□□□ -1.63
CARS2-223	ENST00000540785	FECH	P22830	423 aa		4.9	□□□□□ -1.63
CARS2-223	ENST00000540785	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.9	□□□□□ -1.63
CARS2-223	ENST00000540785	OCEL1	Q9H607	264 aa		4.9	□□□□□ -1.63
CARS2-223	ENST00000540785	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.9	□□□□□ -1.63
CARS2-223	ENST00000540785	ARID3C	A6NKF2	412 aa		4.89	□□□□□ -1.63
CARS2-223	ENST00000540785	PDCD7	Q8N8D1	485 aa	Known RBP	4.89	□□□□□ -1.63
CARS2-223	ENST00000540785	KIF3C	O14782	793 aa		4.88	□□□□□ -1.63
CARS2-223	ENST00000540785	PLCG2	P16885	1265 aa		4.88	□□□□□ -1.63
CARS2-223	ENST00000540785	PTGER2	P43116	358 aa		4.88	□□□□□ -1.63
CARS2-223	ENST00000540785	ATN1	P54259	1190 aa	Predicted RBP	4.88	□□□□□ -1.63
CARS2-223	ENST00000540785	OXER1	Q8TDS5	423 aa		4.88	□□□□□ -1.63
CARS2-223	ENST00000540785	L3MBTL3	Q96JM7	780 aa	Predicted RBP	4.88	□□□□□ -1.63
CARS2-223	ENST00000540785	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	4.88	□□□□□ -1.63
CARS2-223	ENST00000540785	EVI5	O60447	810 aa		4.87	□□□□□ -1.63
CARS2-223	ENST00000540785	IRX5	P78411	483 aa	Predicted RBP	4.87	□□□□□ -1.63
CARS2-223	ENST00000540785	TRIM26	Q12899	539 aa	Predicted RBP	4.87	□□□□□ -1.63
CARS2-223	ENST00000540785	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.87	□□□□□ -1.63
CARS2-223	ENST00000540785	GOPC	Q9HD26	462 aa		4.87	□□□□□ -1.63
CARS2-223	ENST00000540785	PTGDR	Q13258	359 aa		4.86	□□□□□ -1.63
CARS2-223	ENST00000540785	C1orf115	Q9H7X2	142 aa		4.86	□□□□□ -1.63
CARS2-223	ENST00000540785	MS4A1	P11836	297 aa		4.85	□□□□□ -1.63
CARS2-223	ENST00000540785	IER5L	Q5T953	404 aa		4.85	□□□□□ -1.63
CARS2-223	ENST00000540785	ATMIN	O43313	823 aa	Predicted RBP	4.84	□□□□□ -1.63
CARS2-223	ENST00000540785	RANGAP1	P46060	587 aa	Predicted RBP	4.84	□□□□□ -1.63
CARS2-223	ENST00000540785	PRIM1	P49642	420 aa	Known RBP	4.84	□□□□□ -1.63
CARS2-223	ENST00000540785	CLCN6	P51797	869 aa		4.84	□□□□□ -1.63
CARS2-223	ENST00000540785	CLUAP1	Q96AJ1	413 aa		4.84	□□□□□ -1.63
CARS2-223	ENST00000540785		A6NJR5	290 aa		4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	HAX1	O00165	279 aa		4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	MAP3K7	O43318	606 aa		4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	TRAK2	O60296	914 aa		4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	SEC24B	O95487	1268 aa		4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	PDIA4	P13667	645 aa	Known RBP	4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	SSTR3	P32745	418 aa	Predicted RBP	4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	CLCN1	P35523	988 aa		4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	MDM2	Q00987	491 aa	Predicted RBP	4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	TMEM92	Q6UXU6	159 aa		4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	RBM33	Q96EV2	1170 aa	Known RBP	4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	REPIN1	Q9BWE0	567 aa	Known RBP	4.83	□□□□□ -1.64
CARS2-223	ENST00000540785	HRC	P23327	699 aa		4.82	□□□□□ -1.64
CARS2-223	ENST00000540785	SH3D19	Q5HYK7	790 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms