RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
SNHG1-205ENST00000537869 ZC3H15Q8WU90 426 aaKnown RBP12.48□□□□□ -0.41
SNHG1-205ENST00000537869 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
SNHG1-205ENST00000537869 DSG2Q14126 1118 aa12.46□□□□□ -0.41
SNHG1-205ENST00000537869 IER5LQ5T953 404 aa12.45□□□□□ -0.42
SNHG1-205ENST00000537869 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
SNHG1-205ENST00000537869 TMC2Q8TDI7 906 aa12.43□□□□□ -0.42
SNHG1-205ENST00000537869 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
SNHG1-205ENST00000537869 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
SNHG1-205ENST00000537869 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
SNHG1-205ENST00000537869 GABBR2O75899 941 aa12.41□□□□□ -0.42
SNHG1-205ENST00000537869 FOXK1P85037 733 aa12.41□□□□□ -0.42
SNHG1-205ENST00000537869 DPYSL4O14531 572 aa12.4□□□□□ -0.42
SNHG1-205ENST00000537869 MLLT3P42568 568 aaPredicted RBP12.39□□□□□ -0.43
SNHG1-205ENST00000537869 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
SNHG1-205ENST00000537869 PLCG2P16885 1265 aa12.38□□□□□ -0.43
SNHG1-205ENST00000537869 G3V3G9 751 aa12.37□□□□□ -0.43
SNHG1-205ENST00000537869 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
SNHG1-205ENST00000537869 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
SNHG1-205ENST00000537869 KIF3CO14782 793 aa12.36□□□□□ -0.43
SNHG1-205ENST00000537869 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
SNHG1-205ENST00000537869 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
SNHG1-205ENST00000537869 ZMYND10O75800 440 aa12.33□□□□□ -0.44
SNHG1-205ENST00000537869 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
SNHG1-205ENST00000537869 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
SNHG1-205ENST00000537869 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-205ENST00000537869 PDIA6Q15084 440 aa12.32□□□□□ -0.44
SNHG1-205ENST00000537869 SEC24BO95487 1268 aa12.31□□□□□ -0.44
SNHG1-205ENST00000537869 DCBLD2Q96PD2 775 aa12.31□□□□□ -0.44
SNHG1-205ENST00000537869 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
SNHG1-205ENST00000537869 TMEM92Q6UXU6 159 aa12.3□□□□□ -0.44
SNHG1-205ENST00000537869 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
SNHG1-205ENST00000537869 BARGINQ6ZT62 677 aa12.27□□□□□ -0.45
SNHG1-205ENST00000537869 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
SNHG1-205ENST00000537869 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
SNHG1-205ENST00000537869 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
SNHG1-205ENST00000537869 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
SNHG1-205ENST00000537869 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
SNHG1-205ENST00000537869 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.451e-26■□□□□ 8.6
SNHG1-205ENST00000537869 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
SNHG1-205ENST00000537869 C7P10643 843 aa12.21□□□□□ -0.45
SNHG1-205ENST00000537869 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
SNHG1-205ENST00000537869 POTEHQ6S545 545 aa12.2□□□□□ -0.46
SNHG1-205ENST00000537869 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
SNHG1-205ENST00000537869 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
SNHG1-205ENST00000537869 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
SNHG1-205ENST00000537869 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
SNHG1-205ENST00000537869 AK7Q96M32 723 aa12.16□□□□□ -0.46
SNHG1-205ENST00000537869 GPR37O15354 613 aa12.13□□□□□ -0.47
SNHG1-205ENST00000537869 TBC1D12O60347 775 aa12.12□□□□□ -0.47
SNHG1-205ENST00000537869 OSBPP22059 807 aa12.12□□□□□ -0.47
SNHG1-205ENST00000537869 PTGER2P43116 358 aa12.12□□□□□ -0.47
SNHG1-205ENST00000537869 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
SNHG1-205ENST00000537869 DDX12PQ92771 950 aa12.11□□□□□ -0.47
SNHG1-205ENST00000537869 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
SNHG1-205ENST00000537869 EVI5O60447 810 aa12.1□□□□□ -0.47
SNHG1-205ENST00000537869 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
SNHG1-205ENST00000537869 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
SNHG1-205ENST00000537869 TRIM66O15016 1216 aa12.06□□□□□ -0.48
SNHG1-205ENST00000537869 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
SNHG1-205ENST00000537869 PRIM1P49642 420 aaKnown RBP12.05□□□□□ -0.48
SNHG1-205ENST00000537869 SLC34A2O95436 690 aa12.03□□□□□ -0.48
SNHG1-205ENST00000537869 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
SNHG1-205ENST00000537869 PDE4DQ08499 809 aa12.02□□□□□ -0.49
SNHG1-205ENST00000537869 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
SNHG1-205ENST00000537869 MINK1Q8N4C8 1332 aaPredicted RBP12.01□□□□□ -0.49
SNHG1-205ENST00000537869 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
SNHG1-205ENST00000537869 GNPATO15228 680 aa11.99□□□□□ -0.49
SNHG1-205ENST00000537869 FECHP22830 423 aa11.99□□□□□ -0.49
SNHG1-205ENST00000537869 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
SNHG1-205ENST00000537869 FCHSD2O94868 740 aa11.98□□□□□ -0.49
SNHG1-205ENST00000537869 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
SNHG1-205ENST00000537869 HIC1Q14526 733 aa11.98□□□□□ -0.49
SNHG1-205ENST00000537869 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
SNHG1-205ENST00000537869 IRF6O14896 467 aa11.97□□□□□ -0.49
SNHG1-205ENST00000537869 IL27Q8NEV9 243 aa11.96□□□□□ -0.49
SNHG1-205ENST00000537869 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
SNHG1-205ENST00000537869 PTGDRQ13258 359 aa11.95□□□□□ -0.5
SNHG1-205ENST00000537869 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
SNHG1-205ENST00000537869 PHF14O94880 888 aa11.92□□□□□ -0.5
SNHG1-205ENST00000537869 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
SNHG1-205ENST00000537869 EPAS1Q99814 870 aa11.91□□□□□ -0.5
SNHG1-205ENST00000537869 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
SNHG1-205ENST00000537869 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
SNHG1-205ENST00000537869 PCDHGA10Q9Y5H3 936 aa11.9□□□□□ -0.5
SNHG1-205ENST00000537869 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
SNHG1-205ENST00000537869 NPDC1Q9NQX5 325 aaPredicted RBP11.89□□□□□ -0.51
SNHG1-205ENST00000537869 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
SNHG1-205ENST00000537869 POTEJP0CG39 1038 aa11.88□□□□□ -0.51
SNHG1-205ENST00000537869 AMHR2Q16671 573 aa11.88□□□□□ -0.51
SNHG1-205ENST00000537869 MAP3K7O43318 606 aa11.87□□□□□ -0.51
SNHG1-205ENST00000537869 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
SNHG1-205ENST00000537869 SLAIN1Q8ND83 568 aa11.87□□□□□ -0.51
SNHG1-205ENST00000537869 FAM117AQ9C073 453 aa11.86□□□□□ -0.51
SNHG1-205ENST00000537869 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
SNHG1-205ENST00000537869 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
SNHG1-205ENST00000537869 TYW1BQ6NUM6 668 aa11.85□□□□□ -0.51
SNHG1-205ENST00000537869 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
SNHG1-205ENST00000537869 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
SNHG1-205ENST00000537869 KHSRPQ92945 711 aaKnown RBP eCLIP11.81□□□□□ -0.522e-12■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms