RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 PLCG2P16885 1265 aa10.31□□□□□ -0.76
CASP4-211ENST00000533252 PPP1R15BQ5SWA1 713 aa10.31□□□□□ -0.76
CASP4-211ENST00000533252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.31□□□□□ -0.76
CASP4-211ENST00000533252 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
CASP4-211ENST00000533252 DSG2Q14126 1118 aa10.3□□□□□ -0.76
CASP4-211ENST00000533252 LMOD2Q6P5Q4 547 aa10.3□□□□□ -0.76
CASP4-211ENST00000533252 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
CASP4-211ENST00000533252 IER5LQ5T953 404 aa10.28□□□□□ -0.76
CASP4-211ENST00000533252 SEC24BO95487 1268 aa10.27□□□□□ -0.77
CASP4-211ENST00000533252 POTEIP0CG38 1075 aa10.27□□□□□ -0.77
CASP4-211ENST00000533252 TMC2Q8TDI7 906 aa10.27□□□□□ -0.77
CASP4-211ENST00000533252 POTEFA5A3E0 1075 aa10.26□□□□□ -0.77
CASP4-211ENST00000533252 C2orf72A6NCS6 295 aa10.26□□□□□ -0.77
CASP4-211ENST00000533252 G3V3G9 751 aa10.26□□□□□ -0.77
CASP4-211ENST00000533252 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
CASP4-211ENST00000533252 TMEM121BQ9BXQ6 578 aaPredicted RBP10.25□□□□□ -0.77
CASP4-211ENST00000533252 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
CASP4-211ENST00000533252 TESPA1A2RU30 521 aaPredicted RBP10.24□□□□□ -0.77
CASP4-211ENST00000533252 DPYSL4O14531 572 aa10.23□□□□□ -0.77
CASP4-211ENST00000533252 TMEM92Q6UXU6 159 aa10.23□□□□□ -0.77
CASP4-211ENST00000533252 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
CASP4-211ENST00000533252 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.77
CASP4-211ENST00000533252 FOXK1P85037 733 aa10.2□□□□□ -0.78
CASP4-211ENST00000533252 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
CASP4-211ENST00000533252 SLC39A7Q92504 469 aa10.19□□□□□ -0.78
CASP4-211ENST00000533252 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
CASP4-211ENST00000533252 KIF3CO14782 793 aa10.18□□□□□ -0.78
CASP4-211ENST00000533252 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
CASP4-211ENST00000533252 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
CASP4-211ENST00000533252 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
CASP4-211ENST00000533252 C7P10643 843 aa10.16□□□□□ -0.78
CASP4-211ENST00000533252 SP7Q8TDD2 431 aaPredicted RBP10.16□□□□□ -0.78
CASP4-211ENST00000533252 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
CASP4-211ENST00000533252 RBM26Q5T8P6 1007 aaKnown RBP10.15□□□□□ -0.78
CASP4-211ENST00000533252 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
CASP4-211ENST00000533252 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
CASP4-211ENST00000533252 GRXCR2A6NFK2 248 aa10.08□□□□□ -0.8
CASP4-211ENST00000533252 PDIA6Q15084 440 aa10.08□□□□□ -0.8
CASP4-211ENST00000533252 C3orf67Q6ZVT6 689 aa10.08□□□□□ -0.8
CASP4-211ENST00000533252 SLC24A3Q9HC58 644 aa10.08□□□□□ -0.8
CASP4-211ENST00000533252 SPDYE16A6NNV3 312 aaPredicted RBP10.06□□□□□ -0.8
CASP4-211ENST00000533252 OXER1Q8TDS5 423 aa10.05□□□□□ -0.8
CASP4-211ENST00000533252 DDX12PQ92771 950 aa10.02□□□□□ -0.81
CASP4-211ENST00000533252 ZMYND10O75800 440 aa10.01□□□□□ -0.81
CASP4-211ENST00000533252 GPIHBP1Q8IV16 184 aa10.01□□□□□ -0.81
CASP4-211ENST00000533252 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
CASP4-211ENST00000533252 EVI5O60447 810 aa9.99□□□□□ -0.81
CASP4-211ENST00000533252 POTEJP0CG39 1038 aa9.99□□□□□ -0.81
CASP4-211ENST00000533252 POTEB2H3BUK9 544 aa9.98□□□□□ -0.81
CASP4-211ENST00000533252 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
CASP4-211ENST00000533252 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
CASP4-211ENST00000533252 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
CASP4-211ENST00000533252 TBC1D12O60347 775 aa9.97□□□□□ -0.81
CASP4-211ENST00000533252 KRI1Q8N9T8 703 aaKnown RBP9.97□□□□□ -0.81
CASP4-211ENST00000533252 OSBPP22059 807 aa9.96□□□□□ -0.82
CASP4-211ENST00000533252 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
CASP4-211ENST00000533252 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
CASP4-211ENST00000533252 NEUROD2Q15784 382 aa9.94□□□□□ -0.82
CASP4-211ENST00000533252 GPR37O15354 613 aa9.92□□□□□ -0.82
CASP4-211ENST00000533252 PCDHGA4Q9Y5G9 962 aa9.91□□□□□ -0.82
CASP4-211ENST00000533252 PTGER2P43116 358 aa9.9□□□□□ -0.82
CASP4-211ENST00000533252 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
CASP4-211ENST00000533252 SLC34A2O95436 690 aa9.88□□□□□ -0.83
CASP4-211ENST00000533252 FECHP22830 423 aa9.88□□□□□ -0.83
CASP4-211ENST00000533252 RBM33Q96EV2 1170 aaKnown RBP9.88□□□□□ -0.83
CASP4-211ENST00000533252 AK7Q96M32 723 aa9.88□□□□□ -0.83
CASP4-211ENST00000533252 SLAIN1Q8ND83 568 aa9.87□□□□□ -0.83
CASP4-211ENST00000533252 GPBP1L1Q9HC44 474 aaPredicted RBP9.86□□□□□ -0.83
CASP4-211ENST00000533252 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
CASP4-211ENST00000533252 CDHR5Q9HBB8 845 aa9.85□□□□□ -0.83
CASP4-211ENST00000533252 ZNF316A6NFI3 1004 aaPredicted RBP9.84□□□□□ -0.83
CASP4-211ENST00000533252 TRIM66O15016 1216 aa9.84□□□□□ -0.83
CASP4-211ENST00000533252 ARSIQ5FYB1 569 aa9.84□□□□□ -0.83
CASP4-211ENST00000533252 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
CASP4-211ENST00000533252 PCDHGA10Q9Y5H3 936 aa9.83□□□□□ -0.84
CASP4-211ENST00000533252 NUDT7P0C024 238 aa9.82□□□□□ -0.84
CASP4-211ENST00000533252 TMEM132AQ24JP5 1023 aa9.82□□□□□ -0.84
CASP4-211ENST00000533252 MAP3K7O43318 606 aa9.81□□□□□ -0.84
CASP4-211ENST00000533252 FCHSD2O94868 740 aa9.81□□□□□ -0.84
CASP4-211ENST00000533252 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
CASP4-211ENST00000533252 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
CASP4-211ENST00000533252 GNPATO15228 680 aa9.8□□□□□ -0.84
CASP4-211ENST00000533252 PHF14O94880 888 aa9.79□□□□□ -0.84
CASP4-211ENST00000533252 PDE4DQ08499 809 aa9.79□□□□□ -0.84
CASP4-211ENST00000533252 PTGDRQ13258 359 aa9.79□□□□□ -0.84
CASP4-211ENST00000533252 CCDC102AQ96A19 550 aa9.79□□□□□ -0.84
CASP4-211ENST00000533252 SCUBE2Q9NQ36 999 aa9.79□□□□□ -0.84
CASP4-211ENST00000533252 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
CASP4-211ENST00000533252 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
CASP4-211ENST00000533252 NPDC1Q9NQX5 325 aaPredicted RBP9.78□□□□□ -0.84
CASP4-211ENST00000533252 IRF6O14896 467 aa9.77□□□□□ -0.85
CASP4-211ENST00000533252 HIC1Q14526 733 aa9.77□□□□□ -0.85
CASP4-211ENST00000533252 EPAS1Q99814 870 aa9.77□□□□□ -0.85
CASP4-211ENST00000533252 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
CASP4-211ENST00000533252 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
CASP4-211ENST00000533252 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
CASP4-211ENST00000533252 TYW1BQ6NUM6 668 aa9.76□□□□□ -0.85
CASP4-211ENST00000533252 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
CASP4-211ENST00000533252 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
CASP4-211ENST00000533252 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms