RNA–Protein interactions for RNA: ENST00000532412.1

CBX3P8-201, Transcript of chromobox 3 pseudogene 8, humanhuman

BASIC

Gene CBX3P8, Length 525 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P8-201ENST00000532412 RIMBP2O15034 1052 aa7.73□□□□□ -1.17
CBX3P8-201ENST00000532412 RGL2O15211 777 aa7.73□□□□□ -1.17
CBX3P8-201ENST00000532412 EFCAB3Q8N7B9 438 aa7.71□□□□□ -1.18
CBX3P8-201ENST00000532412 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
CBX3P8-201ENST00000532412 STK25O00506 426 aa7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 SOX12O15370 315 aa7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 BCL11BQ9C0K0 894 aaPredicted RBP7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 STK24Q9Y6E0 443 aa7.7□□□□□ -1.18
CBX3P8-201ENST00000532412 GPR153Q6NV75 609 aa7.67□□□□□ -1.18
CBX3P8-201ENST00000532412 NLRP6P59044 892 aa7.64□□□□□ -1.19
CBX3P8-201ENST00000532412 PHF8Q9UPP1 1060 aa7.63□□□□□ -1.19
CBX3P8-201ENST00000532412 ANKRD13DQ6ZTN6 518 aa7.62□□□□□ -1.19
CBX3P8-201ENST00000532412 MICALL2Q8IY33 904 aa7.62□□□□□ -1.19
CBX3P8-201ENST00000532412 TMEM92Q6UXU6 159 aa7.61□□□□□ -1.19
CBX3P8-201ENST00000532412 HS6ST3Q8IZP7 471 aa7.6□□□□□ -1.19
CBX3P8-201ENST00000532412 LSM11P83369 360 aaKnown RBP eCLIP7.59□□□□□ -1.19
CBX3P8-201ENST00000532412 PLA2G2EQ9NZK7 142 aa7.59□□□□□ -1.19
CBX3P8-201ENST00000532412 CHGAP10645 457 aaKnown RBP7.58□□□□□ -1.2
CBX3P8-201ENST00000532412 MS4A4AQ96JQ5 239 aa7.58□□□□□ -1.2
CBX3P8-201ENST00000532412 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
CBX3P8-201ENST00000532412 FBXO22Q8NEZ5 403 aa7.57□□□□□ -1.2
CBX3P8-201ENST00000532412 DCAF8L2P0C7V8 631 aa7.56□□□□□ -1.2
CBX3P8-201ENST00000532412 AMER1Q5JTC6 1135 aaPredicted RBP7.56□□□□□ -1.2
CBX3P8-201ENST00000532412 ZNF316A6NFI3 1004 aaPredicted RBP7.55□□□□□ -1.2
CBX3P8-201ENST00000532412 ARSIQ5FYB1 569 aa7.55□□□□□ -1.2
CBX3P8-201ENST00000532412 HCSTQ9UBK5 93 aa7.53□□□□□ -1.2
CBX3P8-201ENST00000532412 RYDENQ9NUL5 291 aaKnown RBP7.52□□□□□ -1.21
CBX3P8-201ENST00000532412 PBX2P40425 430 aa7.51□□□□□ -1.21
CBX3P8-201ENST00000532412 DNAJC5Q9H3Z4 198 aa7.51□□□□□ -1.21
CBX3P8-201ENST00000532412 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.21
CBX3P8-201ENST00000532412 POTEEQ6S8J3 1075 aa7.47□□□□□ -1.21
CBX3P8-201ENST00000532412 NKX1-1Q15270 411 aaPredicted RBP7.45□□□□□ -1.22
CBX3P8-201ENST00000532412 RTN4Q9NQC3 1192 aaKnown RBP7.45□□□□□ -1.22
CBX3P8-201ENST00000532412 PPP1R37O75864 691 aa7.44□□□□□ -1.22
CBX3P8-201ENST00000532412 KIF3CO14782 793 aa7.43□□□□□ -1.22
CBX3P8-201ENST00000532412 TMC2Q8TDI7 906 aa7.43□□□□□ -1.22
CBX3P8-201ENST00000532412 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
CBX3P8-201ENST00000532412 ADGRD1Q6QNK2 874 aa7.41□□□□□ -1.22
CBX3P8-201ENST00000532412 C2orf72A6NCS6 295 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 SLC34A2O95436 690 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 NUDT7P0C024 238 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 LHX6Q9UPM6 363 aa7.4□□□□□ -1.22
CBX3P8-201ENST00000532412 ARHGAP33O14559 1287 aa7.37□□□□□ -1.23
CBX3P8-201ENST00000532412 GTPBP6O43824 516 aaPredicted RBP7.37□□□□□ -1.23
CBX3P8-201ENST00000532412 RGS20O76081 388 aa7.37□□□□□ -1.23
CBX3P8-201ENST00000532412 BBXQ8WY36 941 aaPredicted RBP7.36□□□□□ -1.23
CBX3P8-201ENST00000532412 PSDA5PKW4 1024 aaPredicted RBP7.35□□□□□ -1.23
CBX3P8-201ENST00000532412 TK2O00142 265 aa7.35□□□□□ -1.23
CBX3P8-201ENST00000532412 HRO43593 1189 aa7.35□□□□□ -1.23
CBX3P8-201ENST00000532412 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.34□□□□□ -1.23
CBX3P8-201ENST00000532412 PCDHGA4Q9Y5G9 962 aa7.34□□□□□ -1.23
CBX3P8-201ENST00000532412 IRX2Q9BZI1 471 aaPredicted RBP7.33□□□□□ -1.24
CBX3P8-201ENST00000532412 GPHNQ9NQX3 736 aaPredicted RBP7.33□□□□□ -1.24
CBX3P8-201ENST00000532412 FOXK1P85037 733 aa7.32□□□□□ -1.24
CBX3P8-201ENST00000532412 IFFO2Q5TF58 517 aa7.32□□□□□ -1.24
CBX3P8-201ENST00000532412 PDE4AP27815 886 aa7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 PLPP6Q8IY26 295 aa7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 PTCD2Q8WV60 388 aaKnown RBP7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 KCTD12Q96CX2 325 aaKnown RBP7.29□□□□□ -1.24
CBX3P8-201ENST00000532412 TBC1D12O60347 775 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 DSG2Q14126 1118 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 DMRTA1Q5VZB9 504 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 SPRYD3Q8NCJ5 442 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 CRISPLD2Q9H0B8 497 aa7.28□□□□□ -1.24
CBX3P8-201ENST00000532412 KDM4FA0A1W2PPD8 638 aa7.27□□□□□ -1.25
CBX3P8-201ENST00000532412 PSEN2P49810 448 aa7.26□□□□□ -1.25
CBX3P8-201ENST00000532412 PPP1R15BQ5SWA1 713 aa7.25□□□□□ -1.25
CBX3P8-201ENST00000532412 NCKAP5LQ9HCH0 1330 aa7.25□□□□□ -1.25
CBX3P8-201ENST00000532412 DDX27Q96GQ7 796 aaKnown RBP7.24□□□□□ -1.25
CBX3P8-201ENST00000532412 KCNH8Q96L42 1107 aa7.24□□□□□ -1.25
CBX3P8-201ENST00000532412 LARP6Q9BRS8 491 aaKnown RBP7.24□□□□□ -1.25
CBX3P8-201ENST00000532412 A0A0G2JS52 829 aa7.23□□□□□ -1.25
CBX3P8-201ENST00000532412 PPP4R3BQ5MIZ7 849 aa7.23□□□□□ -1.25
CBX3P8-201ENST00000532412 PAXIP1Q6ZW49 1069 aaPredicted RBP7.22□□□□□ -1.25
CBX3P8-201ENST00000532412 STAC3Q96MF2 364 aa7.22□□□□□ -1.25
CBX3P8-201ENST00000532412 CFAP44Q96MT7 982 aa7.22□□□□□ -1.25
CBX3P8-201ENST00000532412 PTPN5P54829 565 aa7.21□□□□□ -1.26
CBX3P8-201ENST00000532412 MFSD10Q14728 455 aa7.21□□□□□ -1.26
CBX3P8-201ENST00000532412 CADPS2Q86UW7 1296 aa7.19□□□□□ -1.26
CBX3P8-201ENST00000532412 OXER1Q8TDS5 423 aa7.19□□□□□ -1.26
CBX3P8-201ENST00000532412 UPF1Q92900 1129 aaKnown RBP eCLIP7.18□□□□□ -1.26
CBX3P8-201ENST00000532412 VPS9D1Q9Y2B5 631 aa7.17□□□□□ -1.26
CBX3P8-201ENST00000532412 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
CBX3P8-201ENST00000532412 MAP3K9P80192 1104 aa7.14□□□□□ -1.27
CBX3P8-201ENST00000532412 KCNK17Q96T54 332 aa7.14□□□□□ -1.27
CBX3P8-201ENST00000532412 SLC4A5Q9BY07 1137 aa7.14□□□□□ -1.27
CBX3P8-201ENST00000532412 BHMG1C9JSJ3 638 aaPredicted RBP7.13□□□□□ -1.27
CBX3P8-201ENST00000532412 Q6ZNB5 142 aa7.13□□□□□ -1.27
CBX3P8-201ENST00000532412 JPH4Q96JJ6 628 aa7.12□□□□□ -1.27
CBX3P8-201ENST00000532412 BCL2L12Q9HB09 334 aa7.12□□□□□ -1.27
CBX3P8-201ENST00000532412 ZNF454Q8N9F8 522 aa7.11□□□□□ -1.27
CBX3P8-201ENST00000532412 WDR70Q9NW82 654 aa7.11□□□□□ -1.27
CBX3P8-201ENST00000532412 EVI5O60447 810 aa7.1□□□□□ -1.27
CBX3P8-201ENST00000532412 CAMK2BQ13554 666 aa7.1□□□□□ -1.27
CBX3P8-201ENST00000532412 EMILIN3Q9NT22 766 aa7.1□□□□□ -1.27
CBX3P8-201ENST00000532412 PTPREP23469 700 aa7.09□□□□□ -1.27
CBX3P8-201ENST00000532412 FOSBP53539 338 aa7.09□□□□□ -1.27
CBX3P8-201ENST00000532412 WNT2BQ93097 391 aa7.08□□□□□ -1.28
CBX3P8-201ENST00000532412 ANO8Q9HCE9 1232 aaPredicted RBP7.08□□□□□ -1.28
CBX3P8-201ENST00000532412 ITGBL1O95965 494 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms