RNA–Protein interactions for RNA: ENST00000530330.1

SNX19-208, Transcript of sorting nexin 19, humanhuman

TSL 1 (best)

Gene SNX19, Length 880 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-208ENST00000530330 ARID3AQ99856 593 aa10.12□□□□□ -0.79
SNX19-208ENST00000530330 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
SNX19-208ENST00000530330 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
SNX19-208ENST00000530330 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
SNX19-208ENST00000530330 ZNF316A6NFI3 1004 aaPredicted RBP10.07□□□□□ -0.8
SNX19-208ENST00000530330 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
SNX19-208ENST00000530330 MAP3K13O43283 966 aa10.06□□□□□ -0.8
SNX19-208ENST00000530330 PPP1R15BQ5SWA1 713 aa10.06□□□□□ -0.8
SNX19-208ENST00000530330 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
SNX19-208ENST00000530330 KIF12Q96FN5 646 aa10.05□□□□□ -0.8
SNX19-208ENST00000530330 MINK1Q8N4C8 1332 aaPredicted RBP10.05□□□□□ -0.8
SNX19-208ENST00000530330 MKRN3Q13064 507 aaKnown RBP10.04□□□□□ -0.8
SNX19-208ENST00000530330 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
SNX19-208ENST00000530330 APBB1O00213 710 aa10.03□□□□□ -0.8
SNX19-208ENST00000530330 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
SNX19-208ENST00000530330 PDIA6Q15084 440 aa10.03□□□□□ -0.8
SNX19-208ENST00000530330 FAM117AQ9C073 453 aa10.03□□□□□ -0.8
SNX19-208ENST00000530330 GPHNQ9NQX3 736 aaPredicted RBP10.01□□□□□ -0.81
SNX19-208ENST00000530330 DPYSL4O14531 572 aa10□□□□□ -0.81
SNX19-208ENST00000530330 MAP2K5Q13163 448 aa10□□□□□ -0.81
SNX19-208ENST00000530330 GOPCQ9HD26 462 aa10□□□□□ -0.81
SNX19-208ENST00000530330 PRKAR2AP13861 404 aaKnown RBP9.99□□□□□ -0.81
SNX19-208ENST00000530330 CCDC9Q9Y3X0 531 aaKnown RBP9.99□□□□□ -0.81
SNX19-208ENST00000530330 AMHR2Q16671 573 aa9.98□□□□□ -0.81
SNX19-208ENST00000530330 C1orf115Q9H7X2 142 aa9.98□□□□□ -0.81
SNX19-208ENST00000530330 HRCP23327 699 aa9.97□□□□□ -0.81
SNX19-208ENST00000530330 ARID3CA6NKF2 412 aa9.96□□□□□ -0.82
SNX19-208ENST00000530330 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
SNX19-208ENST00000530330 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
SNX19-208ENST00000530330 PLEKHG3A1L390 1219 aa9.94□□□□□ -0.82
SNX19-208ENST00000530330 A6NJR5 290 aa9.94□□□□□ -0.82
SNX19-208ENST00000530330 IRF6O14896 467 aa9.94□□□□□ -0.82
SNX19-208ENST00000530330 TMEM106CQ9BVX2 250 aa9.94□□□□□ -0.82
SNX19-208ENST00000530330 GPR37O15354 613 aa9.93□□□□□ -0.82
SNX19-208ENST00000530330 TTLL12Q14166 644 aaPredicted RBP9.93□□□□□ -0.82
SNX19-208ENST00000530330 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
SNX19-208ENST00000530330 PARP9Q8IXQ6 854 aa9.92□□□□□ -0.82
SNX19-208ENST00000530330 TMC2Q8TDI7 906 aa9.92□□□□□ -0.82
SNX19-208ENST00000530330 GNPATO15228 680 aa9.91□□□□□ -0.82
SNX19-208ENST00000530330 HIC1Q14526 733 aa9.91□□□□□ -0.82
SNX19-208ENST00000530330 EMILIN3Q9NT22 766 aa9.91□□□□□ -0.82
SNX19-208ENST00000530330 FCHSD2O94868 740 aa9.89□□□□□ -0.83
SNX19-208ENST00000530330 GRXCR2A6NFK2 248 aa9.88□□□□□ -0.83
SNX19-208ENST00000530330 TRAK2O60296 914 aa9.88□□□□□ -0.83
SNX19-208ENST00000530330 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
SNX19-208ENST00000530330 DSG2Q14126 1118 aa9.87□□□□□ -0.83
SNX19-208ENST00000530330 ONECUT3O60422 494 aaPredicted RBP9.86□□□□□ -0.83
SNX19-208ENST00000530330 FOXK1P85037 733 aa9.86□□□□□ -0.83
SNX19-208ENST00000530330 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
SNX19-208ENST00000530330 MAP3K9P80192 1104 aa9.85□□□□□ -0.83
SNX19-208ENST00000530330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNX19-208ENST00000530330 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNX19-208ENST00000530330 RAD21O60216 631 aa9.82□□□□□ -0.84
SNX19-208ENST00000530330 CCDC97Q96F63 343 aaPredicted RBP9.82□□□□□ -0.84
SNX19-208ENST00000530330 GIGYF2Q6Y7W6 1299 aaKnown RBP9.81□□□□□ -0.84
SNX19-208ENST00000530330 KCTD17Q8N5Z5 321 aa9.81□□□□□ -0.84
SNX19-208ENST00000530330 CLUAP1Q96AJ1 413 aa9.81□□□□□ -0.84
SNX19-208ENST00000530330 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
SNX19-208ENST00000530330 MCM6Q14566 821 aa9.8□□□□□ -0.84
SNX19-208ENST00000530330 SH3D19Q5HYK7 790 aa9.8□□□□□ -0.84
SNX19-208ENST00000530330 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
SNX19-208ENST00000530330 PROSER2Q86WR7 435 aaPredicted RBP9.79□□□□□ -0.84
SNX19-208ENST00000530330 PLPP6Q8IY26 295 aa9.79□□□□□ -0.84
SNX19-208ENST00000530330 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
SNX19-208ENST00000530330 PHF12Q96QT6 1004 aa9.78□□□□□ -0.84
SNX19-208ENST00000530330 OSBPP22059 807 aa9.77□□□□□ -0.85
SNX19-208ENST00000530330 MICALL2Q8IY33 904 aa9.77□□□□□ -0.85
SNX19-208ENST00000530330 G3V3G9 751 aa9.76□□□□□ -0.85
SNX19-208ENST00000530330 CLCN1P35523 988 aa9.76□□□□□ -0.85
SNX19-208ENST00000530330 TIE1P35590 1138 aa9.76□□□□□ -0.85
SNX19-208ENST00000530330 PTGER2P43116 358 aa9.76□□□□□ -0.85
SNX19-208ENST00000530330 ATP1B4Q9UN42 357 aaPredicted RBP9.76□□□□□ -0.85
SNX19-208ENST00000530330 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
SNX19-208ENST00000530330 TBC1D12O60347 775 aa9.74□□□□□ -0.85
SNX19-208ENST00000530330 MS4A1P11836 297 aa9.73□□□□□ -0.85
SNX19-208ENST00000530330 FECHP22830 423 aa9.72□□□□□ -0.85
SNX19-208ENST00000530330 PTGDRQ13258 359 aa9.72□□□□□ -0.85
SNX19-208ENST00000530330 SKIV2LQ15477 1246 aaKnown RBP9.72□□□□□ -0.85
SNX19-208ENST00000530330 NECTIN2Q92692 538 aa9.71□□□□□ -0.86
SNX19-208ENST00000530330 DDX12PQ92771 950 aa9.71□□□□□ -0.86
SNX19-208ENST00000530330 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
SNX19-208ENST00000530330 GPCPD1Q9NPB8 672 aa9.71□□□□□ -0.86
SNX19-208ENST00000530330 ZNF777Q9ULD5 760 aaPredicted RBP9.71□□□□□ -0.86
SNX19-208ENST00000530330 TTLL13PA6NNM8 815 aa9.7□□□□□ -0.86
SNX19-208ENST00000530330 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
SNX19-208ENST00000530330 PDE4CQ08493 712 aa9.68□□□□□ -0.86
SNX19-208ENST00000530330 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
SNX19-208ENST00000530330 SPDYE5A6NIY4 337 aa9.67□□□□□ -0.86
SNX19-208ENST00000530330 WWC1Q8IX03 1113 aa9.67□□□□□ -0.86
SNX19-208ENST00000530330 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
SNX19-208ENST00000530330 KIF3CO14782 793 aa9.65□□□□□ -0.86
SNX19-208ENST00000530330 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
SNX19-208ENST00000530330 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
SNX19-208ENST00000530330 OXER1Q8TDS5 423 aa9.65□□□□□ -0.86
SNX19-208ENST00000530330 TRIM35Q9UPQ4 493 aa9.65□□□□□ -0.86
SNX19-208ENST00000530330 TRPC6Q9Y210 931 aa9.65□□□□□ -0.86
SNX19-208ENST00000530330 MDM2Q00987 491 aaPredicted RBP9.64□□□□□ -0.87
SNX19-208ENST00000530330 AEBP1Q8IUX7 1158 aa9.64□□□□□ -0.87
SNX19-208ENST00000530330 SSTR3P32745 418 aaPredicted RBP9.63□□□□□ -0.87
SNX19-208ENST00000530330 DPY19L2Q6NUT2 758 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms