RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
PPFIA1-209ENST00000527612 PLCH2O75038 1416 aa11.23□□□□□ -0.61
PPFIA1-209ENST00000527612 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
PPFIA1-209ENST00000527612 ABCC1P33527 1531 aa11.23□□□□□ -0.61
PPFIA1-209ENST00000527612 ZFYVE16Q7Z3T8 1539 aa11.23□□□□□ -0.61
PPFIA1-209ENST00000527612 HECW2Q9P2P5 1572 aa11.23□□□□□ -0.61
PPFIA1-209ENST00000527612 RIMS1Q86UR5 1692 aaKnown RBP11.21□□□□□ -0.61
PPFIA1-209ENST00000527612 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.62
PPFIA1-209ENST00000527612 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
PPFIA1-209ENST00000527612 ARHGAP5Q13017 1502 aa11.2□□□□□ -0.62
PPFIA1-209ENST00000527612 PLEKHD1A6NEE1 506 aa11.2□□□□□ -0.62
PPFIA1-209ENST00000527612 RAPGEF3O95398 923 aa11.19□□□□□ -0.62
PPFIA1-209ENST00000527612 SAMD9LQ8IVG5 1584 aa11.19□□□□□ -0.62
PPFIA1-209ENST00000527612 DIP2CQ9Y2E4 1556 aa11.19□□□□□ -0.62
PPFIA1-209ENST00000527612 YEATS2Q9ULM3 1422 aa11.18□□□□□ -0.62
PPFIA1-209ENST00000527612 MAGI2Q86UL8 1455 aa11.18□□□□□ -0.62
PPFIA1-209ENST00000527612 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
PPFIA1-209ENST00000527612 ZNF518AQ6AHZ1 1483 aa11.17□□□□□ -0.62
PPFIA1-209ENST00000527612 REREQ9P2R6 1566 aa11.16□□□□□ -0.62
PPFIA1-209ENST00000527612 KIDINS220Q9ULH0 1771 aa11.16□□□□□ -0.62
PPFIA1-209ENST00000527612 SCAPERQ9BY12 1400 aa11.16□□□□□ -0.62
PPFIA1-209ENST00000527612 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
PPFIA1-209ENST00000527612 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
PPFIA1-209ENST00000527612 ARHGEF12Q9NZN5 1544 aa11.15□□□□□ -0.62
PPFIA1-209ENST00000527612 PTPRMP28827 1452 aa11.15□□□□□ -0.62
PPFIA1-209ENST00000527612 INO80Q9ULG1 1556 aaPredicted RBP11.14□□□□□ -0.63
PPFIA1-209ENST00000527612 SYCP2Q9BX26 1530 aa11.14□□□□□ -0.63
PPFIA1-209ENST00000527612 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
PPFIA1-209ENST00000527612 CDK11AQ9UQ88 783 aaPredicted RBP11.12□□□□□ -0.63
PPFIA1-209ENST00000527612 C9orf84Q5VXU9 1444 aa11.11□□□□□ -0.63
PPFIA1-209ENST00000527612 GPATCH8Q9UKJ3 1502 aaKnown RBP11.1□□□□□ -0.63
PPFIA1-209ENST00000527612 SUPT6HQ7KZ85 1726 aaKnown RBP11.1□□□□□ -0.63
PPFIA1-209ENST00000527612 MLH3Q9UHC1 1453 aa11.1□□□□□ -0.63
PPFIA1-209ENST00000527612 PLXNC1O60486 1568 aa11.1□□□□□ -0.63
PPFIA1-209ENST00000527612 TRAPPC8Q9Y2L5 1435 aa11.09□□□□□ -0.63
PPFIA1-209ENST00000527612 ADGBQ8N7X0 1667 aa11.08□□□□□ -0.64
PPFIA1-209ENST00000527612 PREX1Q8TCU6 1659 aa11.08□□□□□ -0.64
PPFIA1-209ENST00000527612 ATP10AO60312 1499 aa11.08□□□□□ -0.64
PPFIA1-209ENST00000527612 LMTK3Q96Q04 1460 aa11.08□□□□□ -0.64
PPFIA1-209ENST00000527612 C3P01024 1663 aa11.08□□□□□ -0.64
PPFIA1-209ENST00000527612 AGLP35573 1532 aa11.07□□□□□ -0.64
PPFIA1-209ENST00000527612 ATP7AQ04656 1500 aa11.07□□□□□ -0.64
PPFIA1-209ENST00000527612 EFCAB2Q5VUJ9 269 aa11.06□□□□□ -0.64
PPFIA1-209ENST00000527612 MROH2AA6NES4 1674 aa11.05□□□□□ -0.64
PPFIA1-209ENST00000527612 VPS8Q8N3P4 1428 aa11.05□□□□□ -0.64
PPFIA1-209ENST00000527612 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
PPFIA1-209ENST00000527612 NCOA2Q15596 1464 aa11.03□□□□□ -0.64
PPFIA1-209ENST00000527612 KIAA1107Q9UPP5 1409 aa11.02□□□□□ -0.64
PPFIA1-209ENST00000527612 PLEKHH2Q8IVE3 1493 aa11.02□□□□□ -0.65
PPFIA1-209ENST00000527612 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
PPFIA1-209ENST00000527612 MAP3K1Q13233 1512 aa11.01□□□□□ -0.65
PPFIA1-209ENST00000527612 ARID4BQ4LE39 1312 aaPredicted RBP11.01□□□□□ -0.65
PPFIA1-209ENST00000527612 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
PPFIA1-209ENST00000527612 CAMSAP2Q08AD1 1489 aa11□□□□□ -0.65
PPFIA1-209ENST00000527612 MBD5Q9P267 1494 aa11□□□□□ -0.65
PPFIA1-209ENST00000527612 CLTCQ00610 1675 aaKnown RBP11□□□□□ -0.65
PPFIA1-209ENST00000527612 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
PPFIA1-209ENST00000527612 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
PPFIA1-209ENST00000527612 ARHGEF5Q12774 1597 aa10.99□□□□□ -0.65
PPFIA1-209ENST00000527612 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
PPFIA1-209ENST00000527612 STRCQ7RTU9 1775 aa10.98□□□□□ -0.65
PPFIA1-209ENST00000527612 SETD1BQ9UPS6 1966 aaKnown RBP10.96□□□□□ -0.65
PPFIA1-209ENST00000527612 MYO3AQ8NEV4 1616 aa10.96□□□□□ -0.65
PPFIA1-209ENST00000527612 MAST1Q9Y2H9 1570 aa10.96□□□□□ -0.65
PPFIA1-209ENST00000527612 CCDC141Q6ZP82 1450 aa10.96□□□□□ -0.65
PPFIA1-209ENST00000527612 A2MP01023 1474 aa10.95□□□□□ -0.66
PPFIA1-209ENST00000527612 LOC105371045A0A1W2PR82 267 aa10.95□□□□□ -0.66
PPFIA1-209ENST00000527612 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
PPFIA1-209ENST00000527612 ZNF644Q9H582 1327 aaPredicted RBP10.93□□□□□ -0.66
PPFIA1-209ENST00000527612 MLECQ14165 292 aa10.93□□□□□ -0.66
PPFIA1-209ENST00000527612 CFDP1Q9UEE9 299 aaPredicted RBP10.93□□□□□ -0.66
PPFIA1-209ENST00000527612 EIF2AK4Q9P2K8 1649 aaKnown RBP10.92□□□□□ -0.66
PPFIA1-209ENST00000527612 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
PPFIA1-209ENST00000527612 RTEL1-TNFRSF6BF6WH68 1400 aa10.92□□□□□ -0.66
PPFIA1-209ENST00000527612 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
PPFIA1-209ENST00000527612 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
PPFIA1-209ENST00000527612 SPAG9O60271 1321 aaKnown RBP10.91□□□□□ -0.66
PPFIA1-209ENST00000527612 FAM135AQ9P2D6 1515 aa10.91□□□□□ -0.66
PPFIA1-209ENST00000527612 HNRNPMP52272 730 aaKnown RBP eCLIP10.91□□□□□ -0.66
PPFIA1-209ENST00000527612 ZC3H13Q5T200 1668 aaKnown RBP10.91□□□□□ -0.66
PPFIA1-209ENST00000527612 MYOM3Q5VTT5 1437 aa10.91□□□□□ -0.66
PPFIA1-209ENST00000527612 DNMT1P26358 1616 aaKnown RBP10.9□□□□□ -0.66
PPFIA1-209ENST00000527612 PTPN23Q9H3S7 1636 aa10.9□□□□□ -0.66
PPFIA1-209ENST00000527612 KDM5DQ9BY66 1539 aa10.89□□□□□ -0.67
PPFIA1-209ENST00000527612 CEP152O94986 1710 aa10.88□□□□□ -0.67
PPFIA1-209ENST00000527612 UHRF1BP1Q6BDS2 1440 aa10.88□□□□□ -0.67
PPFIA1-209ENST00000527612 CEP170BQ9Y4F5 1589 aaPredicted RBP10.88□□□□□ -0.67
PPFIA1-209ENST00000527612 NPATQ14207 1427 aa10.87□□□□□ -0.67
PPFIA1-209ENST00000527612 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
PPFIA1-209ENST00000527612 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
PPFIA1-209ENST00000527612 DEPDC5O75140 1603 aa10.87□□□□□ -0.67
PPFIA1-209ENST00000527612 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
PPFIA1-209ENST00000527612 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
PPFIA1-209ENST00000527612 CEBPAP49715 358 aaPredicted RBP10.86□□□□□ -0.67
PPFIA1-209ENST00000527612 HSPA2P54652 639 aa10.86□□□□□ -0.67
PPFIA1-209ENST00000527612 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
PPFIA1-209ENST00000527612 CAMSAP1Q5T5Y3 1602 aa10.85□□□□□ -0.67
PPFIA1-209ENST00000527612 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
PPFIA1-209ENST00000527612 TCOF1Q13428 1488 aaKnown RBP10.85□□□□□ -0.67
PPFIA1-209ENST00000527612 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms