RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 TSPYL1Q9H0U9 437 aa8.91□□□□□ -0.98
LIN7C-202ENST00000524596 NRDCO43847 1150 aa8.89□□□□□ -0.99
LIN7C-202ENST00000524596 HSP90AB4PQ58FF6 505 aa8.89□□□□□ -0.99
LIN7C-202ENST00000524596 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
LIN7C-202ENST00000524596 CCDC66A2RUB6 948 aa8.88□□□□□ -0.99
LIN7C-202ENST00000524596 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
LIN7C-202ENST00000524596 GOLGA6L22H0YM25 854 aa8.88□□□□□ -0.99
LIN7C-202ENST00000524596 NEFHP12036 1026 aa8.88□□□□□ -0.99
LIN7C-202ENST00000524596 MRVI1Q9Y6F6 885 aa8.88□□□□□ -0.99
LIN7C-202ENST00000524596 DDRGK1Q96HY6 314 aa8.88□□□□□ -0.99
LIN7C-202ENST00000524596 GSE1Q14687 1217 aa8.86□□□□□ -0.99
LIN7C-202ENST00000524596 HSP90AB3PQ58FF7 597 aa8.86□□□□□ -0.99
LIN7C-202ENST00000524596 RALBP1Q15311 655 aa8.86□□□□□ -0.99
LIN7C-202ENST00000524596 E9PSI1 815 aa8.85□□□□□ -0.99
LIN7C-202ENST00000524596 LMOD3Q0VAK6 560 aa8.85□□□□□ -0.99
LIN7C-202ENST00000524596 GOLIM4O00461 696 aa8.84□□□□□ -0.99
LIN7C-202ENST00000524596 PLEKHD1A6NEE1 506 aa8.84□□□□□ -0.99
LIN7C-202ENST00000524596 GOLGA6L1Q8N7Z2 621 aa8.84□□□□□ -0.99
LIN7C-202ENST00000524596 CCDC27Q2M243 656 aa8.83□□□□□ -1
LIN7C-202ENST00000524596 ZNF771Q7L3S4 317 aaPredicted RBP8.83□□□□□ -1
LIN7C-202ENST00000524596 BANK1Q8NDB2 785 aa8.82□□□□□ -1
LIN7C-202ENST00000524596 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
LIN7C-202ENST00000524596 STK11IPQ8N1F8 1099 aa8.82□□□□□ -1
LIN7C-202ENST00000524596 CEP120Q8N960 986 aa8.82□□□□□ -1
LIN7C-202ENST00000524596 SOX12O15370 315 aa8.81□□□□□ -1
LIN7C-202ENST00000524596 WDR78Q5VTH9 848 aa8.81□□□□□ -1
LIN7C-202ENST00000524596 GORABQ5T7V8 394 aa8.8□□□□□ -1
LIN7C-202ENST00000524596 TMCO4Q5TGY1 634 aa8.8□□□□□ -1
LIN7C-202ENST00000524596 STAC3Q96MF2 364 aa8.8□□□□□ -1
LIN7C-202ENST00000524596 ITGAEP38570 1179 aa8.8□□□□□ -1
LIN7C-202ENST00000524596 FBLN2P98095 1184 aa8.8□□□□□ -1
LIN7C-202ENST00000524596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -1
LIN7C-202ENST00000524596 ZBTB12Q9Y330 459 aaPredicted RBP8.8□□□□□ -1
LIN7C-202ENST00000524596 TCERG1O14776 1098 aaKnown RBP8.8□□□□□ -1
LIN7C-202ENST00000524596 SUDS3Q9H7L9 328 aaPredicted RBP8.8□□□□□ -1
LIN7C-202ENST00000524596 UPF2Q9HAU5 1272 aaKnown RBP8.8□□□□□ -1
LIN7C-202ENST00000524596 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
LIN7C-202ENST00000524596 SMAP1Q8IYB5 467 aaPredicted RBP8.8□□□□□ -1
LIN7C-202ENST00000524596 VGLL3A8MV65 326 aa8.79□□□□□ -1
LIN7C-202ENST00000524596 CC2D2BQ6DHV5 1058 aa8.79□□□□□ -1
LIN7C-202ENST00000524596 ZHX1Q9UKY1 873 aaPredicted RBP8.79□□□□□ -1
LIN7C-202ENST00000524596 KDM4AO75164 1064 aa8.79□□□□□ -1
LIN7C-202ENST00000524596 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
LIN7C-202ENST00000524596 TERF2IPQ9NYB0 399 aa8.79□□□□□ -1
LIN7C-202ENST00000524596 MSNP26038 577 aaKnown RBP8.78□□□□□ -1
LIN7C-202ENST00000524596 MPHOSPH10O00566 681 aaKnown RBP8.78□□□□□ -1
LIN7C-202ENST00000524596 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1.01
LIN7C-202ENST00000524596 KIF20AO95235 890 aa8.77□□□□□ -1.01
LIN7C-202ENST00000524596 MYH16Q9H6N6 1097 aa8.77□□□□□ -1.01
LIN7C-202ENST00000524596 PPP1R1BQ9UD71 204 aaPredicted RBP8.77□□□□□ -1.01
LIN7C-202ENST00000524596 LETM1O95202 739 aaPredicted RBP8.76□□□□□ -1.01
LIN7C-202ENST00000524596 IPO9Q96P70 1041 aaKnown RBP8.76□□□□□ -1.01
LIN7C-202ENST00000524596 TTC36A6NLP5 189 aa8.76□□□□□ -1.01
LIN7C-202ENST00000524596 FAM13BQ9NYF5 915 aa8.76□□□□□ -1.01
LIN7C-202ENST00000524596 HDAC1Q13547 482 aaPredicted RBP8.76□□□□□ -1.01
LIN7C-202ENST00000524596 ARMCX6Q7L4S7 300 aa8.75□□□□□ -1.01
LIN7C-202ENST00000524596 SETSIPP0DME0 302 aa8.75□□□□□ -1.01
LIN7C-202ENST00000524596 TDO2P48775 406 aa8.75□□□□□ -1.01
LIN7C-202ENST00000524596 VGFO15240 615 aaPredicted RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 FOXD4L4Q8WXT5 416 aaPredicted RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 CCDC97Q96F63 343 aaPredicted RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 NAP1L1P55209 391 aaKnown RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 KIAA2012Q0VF49 1180 aa8.74□□□□□ -1.01
LIN7C-202ENST00000524596 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 TMED8Q6PL24 325 aaPredicted RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 CHAF1AQ13111 956 aaPredicted RBP8.74□□□□□ -1.01
LIN7C-202ENST00000524596 HMGN5P82970 282 aaKnown RBP8.73□□□□□ -1.01
LIN7C-202ENST00000524596 FAM177A1Q8N128 213 aaPredicted RBP8.73□□□□□ -1.01
LIN7C-202ENST00000524596 PPP4R3BQ5MIZ7 849 aa8.73□□□□□ -1.01
LIN7C-202ENST00000524596 MEX3CQ5U5Q3 659 aaKnown RBP8.72□□□□□ -1.01
LIN7C-202ENST00000524596 HIRIP3Q9BW71 556 aaPredicted RBP8.72□□□□□ -1.01
LIN7C-202ENST00000524596 MAFGO15525 162 aa8.72□□□□□ -1.01
LIN7C-202ENST00000524596 MIER1Q8N108 512 aa8.72□□□□□ -1.01
LIN7C-202ENST00000524596 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.72□□□□□ -1.01
LIN7C-202ENST00000524596 FAM43BQ6ZT52 329 aaPredicted RBP8.72□□□□□ -1.01
LIN7C-202ENST00000524596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.016e-7■■■■■ 83.3
LIN7C-202ENST00000524596 ZRSR2Q15696 482 aaKnown RBP8.71□□□□□ -1.01
LIN7C-202ENST00000524596 MNS1Q8NEH6 495 aa8.71□□□□□ -1.01
LIN7C-202ENST00000524596 GTPBP4Q9BZE4 634 aaKnown RBP8.71□□□□□ -1.01
LIN7C-202ENST00000524596 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.01
LIN7C-202ENST00000524596 TMCO5BA8MYB1 307 aa8.71□□□□□ -1.01
LIN7C-202ENST00000524596 RGS22Q8NE09 1264 aa8.71□□□□□ -1.02
LIN7C-202ENST00000524596 CTR9Q6PD62 1173 aa8.71□□□□□ -1.02
LIN7C-202ENST00000524596 PRDM16Q9HAZ2 1276 aa8.71□□□□□ -1.02
LIN7C-202ENST00000524596 POLD1P28340 1107 aa8.7□□□□□ -1.02
LIN7C-202ENST00000524596 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
LIN7C-202ENST00000524596 CGNQ9P2M7 1197 aaKnown RBP8.7□□□□□ -1.02
LIN7C-202ENST00000524596 CCP110O43303 1012 aa8.7□□□□□ -1.02
LIN7C-202ENST00000524596 PES1O00541 588 aaKnown RBP8.69□□□□□ -1.02
LIN7C-202ENST00000524596 NOM1Q5C9Z4 860 aaKnown RBP8.69□□□□□ -1.02
LIN7C-202ENST00000524596 FBXW7Q969H0 707 aa8.69□□□□□ -1.02
LIN7C-202ENST00000524596 FOXD4L6Q3SYB3 417 aaPredicted RBP8.69□□□□□ -1.02
LIN7C-202ENST00000524596 FOXD4L3Q6VB84 417 aaPredicted RBP8.69□□□□□ -1.02
LIN7C-202ENST00000524596 RNF216Q9NWF9 866 aaPredicted RBP8.69□□□□□ -1.02
LIN7C-202ENST00000524596 CENPJQ9HC77 1338 aaPredicted RBP8.69□□□□□ -1.02
LIN7C-202ENST00000524596 LIG1P18858 919 aa8.69□□□□□ -1.02
LIN7C-202ENST00000524596 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
LIN7C-202ENST00000524596 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
LIN7C-202ENST00000524596 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms