RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 TRAK2O60296 914 aa8.8□□□□□ -1
NPM1-211ENST00000523622 ANKRD13AQ8IZ07 590 aa8.8□□□□□ -1
NPM1-211ENST00000523622 PROM2Q8N271 834 aa8.79□□□□□ -1
NPM1-211ENST00000523622 RETREG2Q8NC44 543 aa8.79□□□□□ -1
NPM1-211ENST00000523622 GPBP1L1Q9HC44 474 aaPredicted RBP8.79□□□□□ -1
NPM1-211ENST00000523622 SMARCA5O60264 1052 aaPredicted RBP8.78□□□□□ -1
NPM1-211ENST00000523622 NOL8Q76FK4 1167 aaKnown RBP8.78□□□□□ -1
NPM1-211ENST00000523622 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
NPM1-211ENST00000523622 SPATA32Q96LK8 384 aa8.77□□□□□ -1.01
NPM1-211ENST00000523622 RNF216Q9NWF9 866 aaPredicted RBP8.77□□□□□ -1.01
NPM1-211ENST00000523622 IGSF5Q9NSI5 407 aa8.76□□□□□ -1.01
NPM1-211ENST00000523622 NAP1L2Q9ULW6 460 aaPredicted RBP8.76□□□□□ -1.01
NPM1-211ENST00000523622 A6NJR5 290 aa8.75□□□□□ -1.01
NPM1-211ENST00000523622 FAM43BQ6ZT52 329 aaPredicted RBP8.75□□□□□ -1.01
NPM1-211ENST00000523622 SPDYE4A6NLX3 237 aa8.74□□□□□ -1.01
NPM1-211ENST00000523622 BRD1O95696 1058 aa8.74□□□□□ -1.01
NPM1-211ENST00000523622 NEFMP07197 916 aa8.74□□□□□ -1.01
NPM1-211ENST00000523622 FLIIQ13045 1269 aa8.74□□□□□ -1.01
NPM1-211ENST00000523622 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
NPM1-211ENST00000523622 GLIPR1L2Q4G1C9 344 aa8.73□□□□□ -1.01
NPM1-211ENST00000523622 SECISBP2LQ93073 1101 aaKnown RBP8.73□□□□□ -1.01
NPM1-211ENST00000523622 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
NPM1-211ENST00000523622 PTMAP06454 111 aaKnown RBP8.72□□□□□ -1.01
NPM1-211ENST00000523622 FAM50AQ14320 339 aaKnown RBP8.72□□□□□ -1.01
NPM1-211ENST00000523622 IPO4Q8TEX9 1081 aaKnown RBP8.72□□□□□ -1.01
NPM1-211ENST00000523622 UNCXA6NJT0 531 aa8.71□□□□□ -1.02
NPM1-211ENST00000523622 GTPBP6O43824 516 aaPredicted RBP8.71□□□□□ -1.02
NPM1-211ENST00000523622 TMTC2Q8N394 836 aa8.71□□□□□ -1.02
NPM1-211ENST00000523622 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
NPM1-211ENST00000523622 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.02
NPM1-211ENST00000523622 MARCH6O60337 910 aa8.7□□□□□ -1.02
NPM1-211ENST00000523622 ZMYND10O75800 440 aa8.7□□□□□ -1.02
NPM1-211ENST00000523622 NKX1-1Q15270 411 aaPredicted RBP8.7□□□□□ -1.02
NPM1-211ENST00000523622 MYH16Q9H6N6 1097 aa8.7□□□□□ -1.02
NPM1-211ENST00000523622 SPTY2D1Q68D10 685 aaPredicted RBP8.69□□□□□ -1.02
NPM1-211ENST00000523622 MYT1LQ9UL68 1186 aa8.68□□□□□ -1.02
NPM1-211ENST00000523622 ZC3H4Q9UPT8 1303 aaKnown RBP8.68□□□□□ -1.02
NPM1-211ENST00000523622 TPD52L2O43399 206 aaKnown RBP8.67□□□□□ -1.02
NPM1-211ENST00000523622 DEKP35659 375 aaKnown RBP8.67□□□□□ -1.02
NPM1-211ENST00000523622 OS9Q13438 667 aaPredicted RBP8.67□□□□□ -1.02
NPM1-211ENST00000523622 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
NPM1-211ENST00000523622 KCNG1Q9UIX4 513 aa8.67□□□□□ -1.02
NPM1-211ENST00000523622 SERPINA10Q9UK55 444 aa8.67□□□□□ -1.02
NPM1-211ENST00000523622 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
NPM1-211ENST00000523622 CCDC97Q96F63 343 aaPredicted RBP8.66□□□□□ -1.02
NPM1-211ENST00000523622 SGSM3Q96HU1 749 aa8.66□□□□□ -1.02
NPM1-211ENST00000523622 ZNF777Q9ULD5 760 aaPredicted RBP8.66□□□□□ -1.02
NPM1-211ENST00000523622 PPME1Q9Y570 386 aa8.66□□□□□ -1.02
NPM1-211ENST00000523622 ANKRD62A6NC57 917 aa8.64□□□□□ -1.03
NPM1-211ENST00000523622 ONECUT3O60422 494 aaPredicted RBP8.64□□□□□ -1.03
NPM1-211ENST00000523622 ATF5Q9Y2D1 282 aaPredicted RBP8.64□□□□□ -1.03
NPM1-211ENST00000523622 GORABQ5T7V8 394 aa8.63□□□□□ -1.03
NPM1-211ENST00000523622 FAM9BQ8IZU0 186 aa8.63□□□□□ -1.03
NPM1-211ENST00000523622 SUGT1Q9Y2Z0 365 aa8.63□□□□□ -1.03
NPM1-211ENST00000523622 FTSJ3Q8IY81 847 aaKnown RBP8.62□□□□□ -1.03
NPM1-211ENST00000523622 ARIH1Q9Y4X5 557 aaPredicted RBP8.62□□□□□ -1.03
NPM1-211ENST00000523622 FOXD4L6Q3SYB3 417 aaPredicted RBP8.61□□□□□ -1.03
NPM1-211ENST00000523622 FOXD4L3Q6VB84 417 aaPredicted RBP8.61□□□□□ -1.03
NPM1-211ENST00000523622 SLC52A1Q9NWF4 448 aa8.61□□□□□ -1.03
NPM1-211ENST00000523622 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
NPM1-211ENST00000523622 PATL2C9JE40 543 aaKnown RBP8.6□□□□□ -1.03
NPM1-211ENST00000523622 SIRT1Q96EB6 747 aa8.6□□□□□ -1.03
NPM1-211ENST00000523622 DRC1Q96MC2 740 aa8.6□□□□□ -1.03
NPM1-211ENST00000523622 HIRIP3Q9BW71 556 aaPredicted RBP8.6□□□□□ -1.03
NPM1-211ENST00000523622 TERF2IPQ9NYB0 399 aa8.6□□□□□ -1.03
NPM1-211ENST00000523622 FAM193AP78312 1265 aa8.58□□□□□ -1.04
NPM1-211ENST00000523622 AK7Q96M32 723 aa8.58□□□□□ -1.04
NPM1-211ENST00000523622 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
NPM1-211ENST00000523622 APBB1IPQ7Z5R6 666 aaPredicted RBP8.56□□□□□ -1.04
NPM1-211ENST00000523622 NME8Q8N427 588 aa8.56□□□□□ -1.04
NPM1-211ENST00000523622 MICAL1Q8TDZ2 1067 aa8.56□□□□□ -1.04
NPM1-211ENST00000523622 KCNA1Q09470 495 aa8.55□□□□□ -1.04
NPM1-211ENST00000523622 RALBP1Q15311 655 aa8.55□□□□□ -1.04
NPM1-211ENST00000523622 PHF14O94880 888 aa8.54□□□□□ -1.04
NPM1-211ENST00000523622 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
NPM1-211ENST00000523622 ERCC3P19447 782 aa8.53□□□□□ -1.04
NPM1-211ENST00000523622 FOXD1Q16676 465 aa8.53□□□□□ -1.04
NPM1-211ENST00000523622 SREK1Q8WXA9 508 aaKnown RBP8.53□□□□□ -1.04
NPM1-211ENST00000523622 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
NPM1-211ENST00000523622 SPINK5Q9NQ38 1064 aaPredicted RBP8.53□□□□□ -1.04
NPM1-211ENST00000523622 CHMP4BQ9H444 224 aaKnown RBP8.52□□□□□ -1.05
NPM1-211ENST00000523622 KIAA1522Q9P206 1035 aaPredicted RBP8.52□□□□□ -1.05
NPM1-211ENST00000523622 RBM47A0AV96 593 aaKnown RBP8.51□□□□□ -1.05
NPM1-211ENST00000523622 TESPA1A2RU30 521 aaPredicted RBP8.51□□□□□ -1.05
NPM1-211ENST00000523622 PROSER2Q86WR7 435 aaPredicted RBP8.51□□□□□ -1.05
NPM1-211ENST00000523622 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
NPM1-211ENST00000523622 RBM26Q5T8P6 1007 aaKnown RBP8.5□□□□□ -1.05
NPM1-211ENST00000523622 ZNF662Q6ZS27 426 aa8.5□□□□□ -1.05
NPM1-211ENST00000523622 RAB11FIP3O75154 756 aa8.49□□□□□ -1.05
NPM1-211ENST00000523622 MORC4Q8TE76 937 aa8.49□□□□□ -1.05
NPM1-211ENST00000523622 UBA5Q9GZZ9 404 aa8.49□□□□□ -1.05
NPM1-211ENST00000523622 HMGB1P1B2RPK0 211 aaPredicted RBP8.48□□□□□ -1.05
NPM1-211ENST00000523622 SEMA3EO15041 775 aa8.48□□□□□ -1.05
NPM1-211ENST00000523622 PDE4DQ08499 809 aa8.48□□□□□ -1.05
NPM1-211ENST00000523622 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
NPM1-211ENST00000523622 SND1Q7KZF4 910 aaKnown RBP eCLIP8.47□□□□□ -1.05
NPM1-211ENST00000523622 EVI5LQ96CN4 794 aa8.47□□□□□ -1.05
NPM1-211ENST00000523622 FOXD4Q12950 439 aaPredicted RBP8.46□□□□□ -1.06
NPM1-211ENST00000523622 GIMAP6Q6P9H5 292 aa8.46□□□□□ -1.06
NPM1-211ENST00000523622 RINLQ6ZS11 566 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms