RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 ZMYND15Q9H091 742 aa12.79□□□□□ -0.36
SPIDR-215ENST00000521798 KDM4CQ9H3R0 1056 aa12.78□□□□□ -0.36
SPIDR-215ENST00000521798 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
SPIDR-215ENST00000521798 MLLT3P42568 568 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-215ENST00000521798 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
SPIDR-215ENST00000521798 IL27Q8NEV9 243 aa12.77□□□□□ -0.37
SPIDR-215ENST00000521798 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
SPIDR-215ENST00000521798 UBTFP17480 764 aaKnown RBP12.74□□□□□ -0.37
SPIDR-215ENST00000521798 TRIM66O15016 1216 aa12.73□□□□□ -0.37
SPIDR-215ENST00000521798 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
SPIDR-215ENST00000521798 PODXL2Q9NZ53 605 aa12.73□□□□□ -0.37
SPIDR-215ENST00000521798 PDE4DQ08499 809 aa12.71□□□□□ -0.37
SPIDR-215ENST00000521798 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
SPIDR-215ENST00000521798 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
SPIDR-215ENST00000521798 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-215ENST00000521798 PDIA6Q15084 440 aa12.62□□□□□ -0.39
SPIDR-215ENST00000521798 GPHNQ9NQX3 736 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-215ENST00000521798 GPR37O15354 613 aa12.61□□□□□ -0.39
SPIDR-215ENST00000521798 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPIDR-215ENST00000521798 DPYSL4O14531 572 aa12.6□□□□□ -0.39
SPIDR-215ENST00000521798 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
SPIDR-215ENST00000521798 FAM117AQ9C073 453 aa12.58□□□□□ -0.4
SPIDR-215ENST00000521798 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
SPIDR-215ENST00000521798 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
SPIDR-215ENST00000521798 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
SPIDR-215ENST00000521798 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-215ENST00000521798 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
SPIDR-215ENST00000521798 TRIM26Q12899 539 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-215ENST00000521798 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
SPIDR-215ENST00000521798 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-215ENST00000521798 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
SPIDR-215ENST00000521798 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
SPIDR-215ENST00000521798 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
SPIDR-215ENST00000521798 ILDR1Q86SU0 546 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-215ENST00000521798 PHF12Q96QT6 1004 aa12.51□□□□□ -0.41
SPIDR-215ENST00000521798 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
SPIDR-215ENST00000521798 AMHR2Q16671 573 aa12.5□□□□□ -0.41
SPIDR-215ENST00000521798 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
SPIDR-215ENST00000521798 ARID3AQ99856 593 aa12.5□□□□□ -0.41
SPIDR-215ENST00000521798 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-215ENST00000521798 FLIIQ13045 1269 aa12.49□□□□□ -0.41
SPIDR-215ENST00000521798 DSG2Q14126 1118 aa12.49□□□□□ -0.41
SPIDR-215ENST00000521798 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
SPIDR-215ENST00000521798 IRF6O14896 467 aa12.45□□□□□ -0.42
SPIDR-215ENST00000521798 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
SPIDR-215ENST00000521798 FOXK1P85037 733 aa12.44□□□□□ -0.42
SPIDR-215ENST00000521798 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
SPIDR-215ENST00000521798 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
SPIDR-215ENST00000521798 HRCP23327 699 aa12.43□□□□□ -0.42
SPIDR-215ENST00000521798 GOPCQ9HD26 462 aa12.43□□□□□ -0.42
SPIDR-215ENST00000521798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.423e-8■■■■□ 23.6
SPIDR-215ENST00000521798 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
SPIDR-215ENST00000521798 APBB1O00213 710 aa12.42□□□□□ -0.42
SPIDR-215ENST00000521798 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
SPIDR-215ENST00000521798 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
SPIDR-215ENST00000521798 GNPATO15228 680 aa12.4□□□□□ -0.42
SPIDR-215ENST00000521798 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-215ENST00000521798 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
SPIDR-215ENST00000521798 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
SPIDR-215ENST00000521798 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
SPIDR-215ENST00000521798 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
SPIDR-215ENST00000521798 TIE1P35590 1138 aa12.37□□□□□ -0.43
SPIDR-215ENST00000521798 HIC1Q14526 733 aa12.37□□□□□ -0.43
SPIDR-215ENST00000521798 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
SPIDR-215ENST00000521798 FCHSD2O94868 740 aa12.35□□□□□ -0.43
SPIDR-215ENST00000521798 OSBPP22059 807 aa12.35□□□□□ -0.43
SPIDR-215ENST00000521798 PLPP6Q8IY26 295 aa12.35□□□□□ -0.43
SPIDR-215ENST00000521798 A6NJR5 290 aa12.34□□□□□ -0.43
SPIDR-215ENST00000521798 TTLL13PA6NNM8 815 aa12.34□□□□□ -0.43
SPIDR-215ENST00000521798 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-215ENST00000521798 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-215ENST00000521798 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
SPIDR-215ENST00000521798 FECHP22830 423 aa12.32□□□□□ -0.44
SPIDR-215ENST00000521798 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
SPIDR-215ENST00000521798 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
SPIDR-215ENST00000521798 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-215ENST00000521798 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
SPIDR-215ENST00000521798 KIF3CO14782 793 aa12.29□□□□□ -0.44
SPIDR-215ENST00000521798 TRAK2O60296 914 aa12.29□□□□□ -0.44
SPIDR-215ENST00000521798 PTGER2P43116 358 aa12.29□□□□□ -0.44
SPIDR-215ENST00000521798 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
SPIDR-215ENST00000521798 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
SPIDR-215ENST00000521798 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
SPIDR-215ENST00000521798 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
SPIDR-215ENST00000521798 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
SPIDR-215ENST00000521798 NPM2Q86SE8 214 aaKnown RBP12.27□□□□□ -0.45
SPIDR-215ENST00000521798 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.45
SPIDR-215ENST00000521798 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
SPIDR-215ENST00000521798 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-215ENST00000521798 MS4A1P11836 297 aa12.26□□□□□ -0.45
SPIDR-215ENST00000521798 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
SPIDR-215ENST00000521798 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
SPIDR-215ENST00000521798 MCM6Q14566 821 aa12.24□□□□□ -0.45
SPIDR-215ENST00000521798 PDCD7Q8N8D1 485 aaKnown RBP12.24□□□□□ -0.45
SPIDR-215ENST00000521798 TMEM121BQ9BXQ6 578 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-215ENST00000521798 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
SPIDR-215ENST00000521798 PTGDRQ13258 359 aa12.23□□□□□ -0.45
SPIDR-215ENST00000521798 SH3D19Q5HYK7 790 aa12.23□□□□□ -0.45
SPIDR-215ENST00000521798 ZBTB7CA1YPR0 619 aa12.22□□□□□ -0.45
SPIDR-215ENST00000521798 DDX12PQ92771 950 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms