RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 RBM26Q5T8P6 1007 aaKnown RBP2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 KRI1Q8N9T8 703 aaKnown RBP2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 DDRGK1Q96HY6 314 aa2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 ZMYND15Q9H091 742 aa2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 RSPH6AQ9H0K4 717 aa2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 GPBP1L1Q9HC44 474 aaPredicted RBP2.48□□□□□ -2.01
RN7SKP88-201ENST00000516847 MINK1Q8N4C8 1332 aaPredicted RBP2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 SUPT5HO00267 1087 aaKnown RBP2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 TIE1P35590 1138 aa2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 FOXK1P85037 733 aa2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 AMHR2Q16671 573 aa2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 TMEM106CQ9BVX2 250 aa2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 GOPCQ9HD26 462 aa2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 ZRANB1Q9UGI0 708 aa2.47□□□□□ -2.01
RN7SKP88-201ENST00000516847 DPYSL4O14531 572 aa2.46□□□□□ -2.02
RN7SKP88-201ENST00000516847 CD44P16070 742 aaKnown RBP2.46□□□□□ -2.02
RN7SKP88-201ENST00000516847 FLIIQ13045 1269 aa2.46□□□□□ -2.02
RN7SKP88-201ENST00000516847 MAP2K5Q13163 448 aa2.46□□□□□ -2.02
RN7SKP88-201ENST00000516847 PIP4P2Q8N4L2 257 aa2.46□□□□□ -2.02
RN7SKP88-201ENST00000516847 IL27Q8NEV9 243 aa2.46□□□□□ -2.02
RN7SKP88-201ENST00000516847 EMILIN3Q9NT22 766 aa2.46□□□□□ -2.02
RN7SKP88-201ENST00000516847 PTGER2P43116 358 aa2.45□□□□□ -2.02
RN7SKP88-201ENST00000516847 DSG2Q14126 1118 aa2.45□□□□□ -2.02
RN7SKP88-201ENST00000516847 HIC1Q14526 733 aa2.45□□□□□ -2.02
RN7SKP88-201ENST00000516847 CHRDL2Q6WN34 429 aa2.45□□□□□ -2.02
RN7SKP88-201ENST00000516847 PHF12Q96QT6 1004 aa2.45□□□□□ -2.02
RN7SKP88-201ENST00000516847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.45□□□□□ -2.02
RN7SKP88-201ENST00000516847 PLEKHG3A1L390 1219 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 TTLL13PA6NNM8 815 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 KIF3CO14782 793 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 IRF6O14896 467 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 GNPATO15228 680 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 CLCN6P51797 869 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 PARP9Q8IXQ6 854 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 MICALL2Q8IY33 904 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 TMC2Q8TDI7 906 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 CCDC102AQ96A19 550 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 MS4A3Q96HJ5 214 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 TMEM121BQ9BXQ6 578 aaPredicted RBP2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 FAM117AQ9C073 453 aa2.44□□□□□ -2.02
RN7SKP88-201ENST00000516847 ZNF316A6NFI3 1004 aaPredicted RBP2.43□□□□□ -2.02
RN7SKP88-201ENST00000516847 ONECUT3O60422 494 aaPredicted RBP2.43□□□□□ -2.02
RN7SKP88-201ENST00000516847 FCHSD2O94868 740 aa2.43□□□□□ -2.02
RN7SKP88-201ENST00000516847 UBTFP17480 764 aaKnown RBP2.43□□□□□ -2.02
RN7SKP88-201ENST00000516847 PLPP6Q8IY26 295 aa2.43□□□□□ -2.02
RN7SKP88-201ENST00000516847 PODXL2Q9NZ53 605 aa2.43□□□□□ -2.02
RN7SKP88-201ENST00000516847 NUTM2FA1L443 756 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 C19orf67A6NJJ6 358 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 A6NJR5 290 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 OSBPP22059 807 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 MAP3K9P80192 1104 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 IER5LQ5T953 404 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 PDCD7Q8N8D1 485 aaKnown RBP2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 BMP2KQ9NSY1 1161 aaPredicted RBP2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 TRIM35Q9UPQ4 493 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 TRPC6Q9Y210 931 aa2.42□□□□□ -2.02
RN7SKP88-201ENST00000516847 C2orf72A6NCS6 295 aa2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 GRXCR2A6NFK2 248 aa2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 PTGDRQ13258 359 aa2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 TTLL12Q14166 644 aaPredicted RBP2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 SH3D19Q5HYK7 790 aa2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 OXER1Q8TDS5 423 aa2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 C1orf115Q9H7X2 142 aa2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 BOLA1Q9Y3E2 137 aa2.41□□□□□ -2.02
RN7SKP88-201ENST00000516847 G3V3G9 751 aa2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 TBC1D12O60347 775 aa2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 RANGAP1P46060 587 aaPredicted RBP2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 IRX5P78411 483 aaPredicted RBP2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 MCM6Q14566 821 aa2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 DPY19L2Q6NUT2 758 aa2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 GIGYF2Q6Y7W6 1299 aaKnown RBP2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 PCMTD1Q96MG8 357 aaPredicted RBP2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 TMUB1Q9BVT8 246 aa2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 OCEL1Q9H607 264 aa2.4□□□□□ -2.03
RN7SKP88-201ENST00000516847 APBB1O00213 710 aa2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 TRAK2O60296 914 aa2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 SLC34A2O95436 690 aa2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 MS4A1P11836 297 aa2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 FECHP22830 423 aa2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 CLCN1P35523 988 aa2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 TRIM26Q12899 539 aaPredicted RBP2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 ASTLQ6HA08 431 aaPredicted RBP2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 PTCD2Q8WV60 388 aaKnown RBP2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 L3MBTL3Q96JM7 780 aaPredicted RBP2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 ANO8Q9HCE9 1232 aaPredicted RBP2.39□□□□□ -2.03
RN7SKP88-201ENST00000516847 SOCS7O14512 581 aa2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 EVI5O60447 810 aa2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 PDIA4P13667 645 aaKnown RBP2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 EN1Q05925 392 aaPredicted RBP2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 SKIV2LQ15477 1246 aaKnown RBP2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 DDX12PQ92771 950 aa2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 EPAS1Q99814 870 aa2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 GPCPD1Q9NPB8 672 aa2.38□□□□□ -2.03
RN7SKP88-201ENST00000516847 ZBTB7CA1YPR0 619 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 SPDYE5A6NIY4 337 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 ARID3CA6NKF2 412 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 ATMINO43313 823 aaPredicted RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 GALR2O43603 387 aaPredicted RBP2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 PHF14O94880 888 aa2.37□□□□□ -2.03
RN7SKP88-201ENST00000516847 PLCG2P16885 1265 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms