RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
ATR-209ENST00000515810 SLC39A7Q92504 469 aa13.78□□□□□ -0.2
ATR-209ENST00000515810 DDX27Q96GQ7 796 aaKnown RBP13.77□□□□□ -0.21
ATR-209ENST00000515810 OCEL1Q9H607 264 aa13.77□□□□□ -0.21
ATR-209ENST00000515810 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
ATR-209ENST00000515810 COLQQ9Y215 455 aaPredicted RBP13.76□□□□□ -0.21
ATR-209ENST00000515810 C7P10643 843 aa13.75□□□□□ -0.21
ATR-209ENST00000515810 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
ATR-209ENST00000515810 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
ATR-209ENST00000515810 PLCG2P16885 1265 aa13.72□□□□□ -0.21
ATR-209ENST00000515810 SEC24BO95487 1268 aa13.7□□□□□ -0.22
ATR-209ENST00000515810 CAMK2BQ13554 666 aa13.7□□□□□ -0.22
ATR-209ENST00000515810 MICALL2Q8IY33 904 aa13.69□□□□□ -0.22
ATR-209ENST00000515810 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
ATR-209ENST00000515810 PPP1R15BQ5SWA1 713 aa13.67□□□□□ -0.22
ATR-209ENST00000515810 DSG2Q14126 1118 aa13.64□□□□□ -0.23
ATR-209ENST00000515810 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
ATR-209ENST00000515810 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
ATR-209ENST00000515810 ZC3H15Q8WU90 426 aaKnown RBP13.61□□□□□ -0.23
ATR-209ENST00000515810 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
ATR-209ENST00000515810 BOLA1Q9Y3E2 137 aa13.61□□□□□ -0.23
ATR-209ENST00000515810 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
ATR-209ENST00000515810 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.24
ATR-209ENST00000515810 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
ATR-209ENST00000515810 TULP1O00294 542 aaPredicted RBP13.57□□□□□ -0.24
ATR-209ENST00000515810 DPYSL4O14531 572 aa13.56□□□□□ -0.24
ATR-209ENST00000515810 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
ATR-209ENST00000515810 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
ATR-209ENST00000515810 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
ATR-209ENST00000515810 KIF3CO14782 793 aa13.53□□□□□ -0.24
ATR-209ENST00000515810 FOXK1P85037 733 aa13.53□□□□□ -0.24
ATR-209ENST00000515810 TMEM92Q6UXU6 159 aa13.52□□□□□ -0.25
ATR-209ENST00000515810 G3V3G9 751 aa13.51□□□□□ -0.25
ATR-209ENST00000515810 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
ATR-209ENST00000515810 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
ATR-209ENST00000515810 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
ATR-209ENST00000515810 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
ATR-209ENST00000515810 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
ATR-209ENST00000515810 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.25
ATR-209ENST00000515810 ZMYND10O75800 440 aa13.44□□□□□ -0.26
ATR-209ENST00000515810 PDIA6Q15084 440 aa13.44□□□□□ -0.26
ATR-209ENST00000515810 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
ATR-209ENST00000515810 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
ATR-209ENST00000515810 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATR-209ENST00000515810 POTEMA6NI47 508 aa13.38□□□□□ -0.27
ATR-209ENST00000515810 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
ATR-209ENST00000515810 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
ATR-209ENST00000515810 GPIHBP1Q8IV16 184 aa13.35□□□□□ -0.27
ATR-209ENST00000515810 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.35□□□□□ -0.27
ATR-209ENST00000515810 MAP3K9P80192 1104 aa13.34□□□□□ -0.27
ATR-209ENST00000515810 TMEM132AQ24JP5 1023 aa13.32□□□□□ -0.28
ATR-209ENST00000515810 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
ATR-209ENST00000515810 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
ATR-209ENST00000515810 GRXCR2A6NFK2 248 aa13.31□□□□□ -0.28
ATR-209ENST00000515810 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
ATR-209ENST00000515810 GPR37O15354 613 aa13.29□□□□□ -0.28
ATR-209ENST00000515810 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
ATR-209ENST00000515810 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
ATR-209ENST00000515810 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
ATR-209ENST00000515810 SCUBE2Q9NQ36 999 aa13.26□□□□□ -0.29
ATR-209ENST00000515810 OSBPP22059 807 aa13.25□□□□□ -0.29
ATR-209ENST00000515810 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
ATR-209ENST00000515810 DDX12PQ92771 950 aa13.25□□□□□ -0.29
ATR-209ENST00000515810 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
ATR-209ENST00000515810 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
ATR-209ENST00000515810 EVI5O60447 810 aa13.21□□□□□ -0.29
ATR-209ENST00000515810 AK7Q96M32 723 aa13.21□□□□□ -0.29
ATR-209ENST00000515810 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
ATR-209ENST00000515810 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
ATR-209ENST00000515810 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
ATR-209ENST00000515810 PTGER2P43116 358 aa13.19□□□□□ -0.3
ATR-209ENST00000515810 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
ATR-209ENST00000515810 TBC1D12O60347 775 aa13.16□□□□□ -0.3
ATR-209ENST00000515810 TRIM66O15016 1216 aa13.15□□□□□ -0.3
ATR-209ENST00000515810 FECHP22830 423 aa13.15□□□□□ -0.3
ATR-209ENST00000515810 SLC34A2O95436 690 aa13.12□□□□□ -0.31
ATR-209ENST00000515810 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
ATR-209ENST00000515810 PDE4DQ08499 809 aa13.1□□□□□ -0.31
ATR-209ENST00000515810 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
ATR-209ENST00000515810 LCE2DQ5TA82 110 aaPredicted RBP13.08□□□□□ -0.32
ATR-209ENST00000515810 KDM4CQ9H3R0 1056 aa13.07□□□□□ -0.32
ATR-209ENST00000515810 GNPATO15228 680 aa13.06□□□□□ -0.32
ATR-209ENST00000515810 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
ATR-209ENST00000515810 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
ATR-209ENST00000515810 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
ATR-209ENST00000515810 IRF6O14896 467 aa13.05□□□□□ -0.32
ATR-209ENST00000515810 MAP2K5Q13163 448 aa13.05□□□□□ -0.32
ATR-209ENST00000515810 MINK1Q8N4C8 1332 aaPredicted RBP13.05□□□□□ -0.32
ATR-209ENST00000515810 FCHSD2O94868 740 aa13.04□□□□□ -0.32
ATR-209ENST00000515810 PTGDRQ13258 359 aa13.04□□□□□ -0.32
ATR-209ENST00000515810 IL27Q8NEV9 243 aa13.04□□□□□ -0.32
ATR-209ENST00000515810 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
ATR-209ENST00000515810 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.33
ATR-209ENST00000515810 HIC1Q14526 733 aa13.02□□□□□ -0.33
ATR-209ENST00000515810 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
ATR-209ENST00000515810 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
ATR-209ENST00000515810 PCDHGA10Q9Y5H3 936 aa13.02□□□□□ -0.33
ATR-209ENST00000515810 NPDC1Q9NQX5 325 aaPredicted RBP13.01□□□□□ -0.33
ATR-209ENST00000515810 PHF14O94880 888 aa12.99□□□□□ -0.33
ATR-209ENST00000515810 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms