RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 TESPA1A2RU30 521 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-216ENST00000509784 GABBR2O75899 941 aa6.77□□□□□ -1.33
CALCOCO2-216ENST00000509784 CAMK2BQ13554 666 aa6.77□□□□□ -1.33
CALCOCO2-216ENST00000509784 IER5LQ5T953 404 aa6.77□□□□□ -1.33
CALCOCO2-216ENST00000509784 G3V3G9 751 aa6.76□□□□□ -1.33
CALCOCO2-216ENST00000509784 PLCG2P16885 1265 aa6.76□□□□□ -1.33
CALCOCO2-216ENST00000509784 TMC2Q8TDI7 906 aa6.76□□□□□ -1.33
CALCOCO2-216ENST00000509784 BOLA1Q9Y3E2 137 aa6.76□□□□□ -1.33
CALCOCO2-216ENST00000509784 DSG2Q14126 1118 aa6.75□□□□□ -1.33
CALCOCO2-216ENST00000509784 ARIH1Q9Y4X5 557 aaPredicted RBP6.75□□□□□ -1.33
CALCOCO2-216ENST00000509784 DCBLD2Q96PD2 775 aa6.74□□□□□ -1.33
CALCOCO2-216ENST00000509784 SEC24BO95487 1268 aa6.73□□□□□ -1.33
CALCOCO2-216ENST00000509784 SMYD5Q6GMV2 418 aa6.73□□□□□ -1.33
CALCOCO2-216ENST00000509784 PELP1Q8IZL8 1130 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-216ENST00000509784 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
CALCOCO2-216ENST00000509784 C2orf72A6NCS6 295 aa6.72□□□□□ -1.33
CALCOCO2-216ENST00000509784 FOXK1P85037 733 aa6.72□□□□□ -1.33
CALCOCO2-216ENST00000509784 ZC3H15Q8WU90 426 aaKnown RBP6.72□□□□□ -1.33
CALCOCO2-216ENST00000509784 EMILIN3Q9NT22 766 aa6.72□□□□□ -1.33
CALCOCO2-216ENST00000509784 DPYSL4O14531 572 aa6.71□□□□□ -1.34
CALCOCO2-216ENST00000509784 PLPP6Q8IY26 295 aa6.71□□□□□ -1.34
CALCOCO2-216ENST00000509784 L3MBTL3Q96JM7 780 aaPredicted RBP6.71□□□□□ -1.34
CALCOCO2-216ENST00000509784 COLQQ9Y215 455 aaPredicted RBP6.71□□□□□ -1.34
CALCOCO2-216ENST00000509784 MLLT3P42568 568 aaPredicted RBP6.7□□□□□ -1.34
CALCOCO2-216ENST00000509784 KIF3CO14782 793 aa6.68□□□□□ -1.34
CALCOCO2-216ENST00000509784 SLC39A7Q92504 469 aa6.68□□□□□ -1.34
CALCOCO2-216ENST00000509784 RBM26Q5T8P6 1007 aaKnown RBP6.67□□□□□ -1.34
CALCOCO2-216ENST00000509784 SPDYE16A6NNV3 312 aaPredicted RBP6.66□□□□□ -1.34
CALCOCO2-216ENST00000509784 C7P10643 843 aa6.66□□□□□ -1.34
CALCOCO2-216ENST00000509784 PDIA6Q15084 440 aa6.66□□□□□ -1.34
CALCOCO2-216ENST00000509784 TMEM92Q6UXU6 159 aa6.66□□□□□ -1.34
CALCOCO2-216ENST00000509784 POTEFA5A3E0 1075 aa6.65□□□□□ -1.34
CALCOCO2-216ENST00000509784 MAP3K9P80192 1104 aa6.65□□□□□ -1.34
CALCOCO2-216ENST00000509784 UPF1Q92900 1129 aaKnown RBP eCLIP6.65□□□□□ -1.34
CALCOCO2-216ENST00000509784 SLC24A3Q9HC58 644 aa6.65□□□□□ -1.34
CALCOCO2-216ENST00000509784 ZMYND10O75800 440 aa6.64□□□□□ -1.35
CALCOCO2-216ENST00000509784 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
CALCOCO2-216ENST00000509784 POTEIP0CG38 1075 aa6.63□□□□□ -1.35
CALCOCO2-216ENST00000509784 GPIHBP1Q8IV16 184 aa6.63□□□□□ -1.35
CALCOCO2-216ENST00000509784 C3orf67Q6ZVT6 689 aa6.62□□□□□ -1.35
CALCOCO2-216ENST00000509784 GRXCR2A6NFK2 248 aa6.61□□□□□ -1.35
CALCOCO2-216ENST00000509784 BRPF1P55201 1214 aaPredicted RBP6.6□□□□□ -1.35
CALCOCO2-216ENST00000509784 BARGINQ6ZT62 677 aa6.6□□□□□ -1.35
CALCOCO2-216ENST00000509784 SP7Q8TDD2 431 aaPredicted RBP6.6□□□□□ -1.35
CALCOCO2-216ENST00000509784 OXER1Q8TDS5 423 aa6.6□□□□□ -1.35
CALCOCO2-216ENST00000509784 NEUROD2Q15784 382 aa6.59□□□□□ -1.35
CALCOCO2-216ENST00000509784 KRI1Q8N9T8 703 aaKnown RBP6.59□□□□□ -1.35
CALCOCO2-216ENST00000509784 TBC1D12O60347 775 aa6.58□□□□□ -1.36
CALCOCO2-216ENST00000509784 EVI5O60447 810 aa6.57□□□□□ -1.36
CALCOCO2-216ENST00000509784 TMEM132AQ24JP5 1023 aa6.57□□□□□ -1.36
CALCOCO2-216ENST00000509784 DDX12PQ92771 950 aa6.57□□□□□ -1.36
CALCOCO2-216ENST00000509784 NUTM2FA1L443 756 aa6.56□□□□□ -1.36
CALCOCO2-216ENST00000509784 OSBPP22059 807 aa6.55□□□□□ -1.36
CALCOCO2-216ENST00000509784 PTCD2Q8WV60 388 aaKnown RBP6.55□□□□□ -1.36
CALCOCO2-216ENST00000509784 AK7Q96M32 723 aa6.55□□□□□ -1.36
CALCOCO2-216ENST00000509784 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.55□□□□□ -1.36
CALCOCO2-216ENST00000509784 ZNF316A6NFI3 1004 aaPredicted RBP6.54□□□□□ -1.36
CALCOCO2-216ENST00000509784 PTGER2P43116 358 aa6.54□□□□□ -1.36
CALCOCO2-216ENST00000509784 GTF3C3Q9Y5Q9 886 aa6.54□□□□□ -1.36
CALCOCO2-216ENST00000509784 GPR37O15354 613 aa6.52□□□□□ -1.37
CALCOCO2-216ENST00000509784 SLC34A2O95436 690 aa6.51□□□□□ -1.37
CALCOCO2-216ENST00000509784 PRIM1P49642 420 aaKnown RBP6.51□□□□□ -1.37
CALCOCO2-216ENST00000509784 TRIM66O15016 1216 aa6.49□□□□□ -1.37
CALCOCO2-216ENST00000509784 FCHSD2O94868 740 aa6.49□□□□□ -1.37
CALCOCO2-216ENST00000509784 GPBP1L1Q9HC44 474 aaPredicted RBP6.49□□□□□ -1.37
CALCOCO2-216ENST00000509784 ANO8Q9HCE9 1232 aaPredicted RBP6.49□□□□□ -1.37
CALCOCO2-216ENST00000509784 PCDHGA4Q9Y5G9 962 aa6.49□□□□□ -1.37
CALCOCO2-216ENST00000509784 MINK1Q8N4C8 1332 aaPredicted RBP6.48□□□□□ -1.37
CALCOCO2-216ENST00000509784 GNPATO15228 680 aa6.47□□□□□ -1.37
CALCOCO2-216ENST00000509784 FECHP22830 423 aa6.47□□□□□ -1.37
CALCOCO2-216ENST00000509784 PDE4DQ08499 809 aa6.47□□□□□ -1.37
CALCOCO2-216ENST00000509784 MAP2K5Q13163 448 aa6.47□□□□□ -1.37
CALCOCO2-216ENST00000509784 HIC1Q14526 733 aa6.47□□□□□ -1.37
CALCOCO2-216ENST00000509784 RBM33Q96EV2 1170 aaKnown RBP6.47□□□□□ -1.37
CALCOCO2-216ENST00000509784 IRF6O14896 467 aa6.46□□□□□ -1.38
CALCOCO2-216ENST00000509784 PHF14O94880 888 aa6.46□□□□□ -1.38
CALCOCO2-216ENST00000509784 POTEJP0CG39 1038 aa6.46□□□□□ -1.38
CALCOCO2-216ENST00000509784 PTGDRQ13258 359 aa6.46□□□□□ -1.38
CALCOCO2-216ENST00000509784 CCDC102AQ96A19 550 aa6.46□□□□□ -1.38
CALCOCO2-216ENST00000509784 KDM4CQ9H3R0 1056 aa6.46□□□□□ -1.38
CALCOCO2-216ENST00000509784 MAP3K7O43318 606 aa6.45□□□□□ -1.38
CALCOCO2-216ENST00000509784 EN1Q05925 392 aaPredicted RBP6.45□□□□□ -1.38
CALCOCO2-216ENST00000509784 EPAS1Q99814 870 aa6.45□□□□□ -1.38
CALCOCO2-216ENST00000509784 CDHR5Q9HBB8 845 aa6.45□□□□□ -1.38
CALCOCO2-216ENST00000509784 PCDHGA10Q9Y5H3 936 aa6.45□□□□□ -1.38
CALCOCO2-216ENST00000509784 POTEB2H3BUK9 544 aa6.44□□□□□ -1.38
CALCOCO2-216ENST00000509784 SLAIN1Q8ND83 568 aa6.44□□□□□ -1.38
CALCOCO2-216ENST00000509784 IL27Q8NEV9 243 aa6.44□□□□□ -1.38
CALCOCO2-216ENST00000509784 TIMELESSQ9UNS1 1208 aa6.44□□□□□ -1.38
CALCOCO2-216ENST00000509784 TYW1BQ6NUM6 668 aa6.43□□□□□ -1.38
CALCOCO2-216ENST00000509784 KDM4FA0A1W2PPD8 638 aa6.42□□□□□ -1.38
CALCOCO2-216ENST00000509784 DOK7Q18PE1 504 aa6.42□□□□□ -1.38
CALCOCO2-216ENST00000509784 TSR1Q2NL82 804 aaKnown RBP6.42□□□□□ -1.38
CALCOCO2-216ENST00000509784 ARSIQ5FYB1 569 aa6.42□□□□□ -1.38
CALCOCO2-216ENST00000509784 KHSRPQ92945 711 aaKnown RBP eCLIP6.42□□□□□ -1.38
CALCOCO2-216ENST00000509784 NPDC1Q9NQX5 325 aaPredicted RBP6.42□□□□□ -1.38
CALCOCO2-216ENST00000509784 NUDT7P0C024 238 aa6.41□□□□□ -1.38
CALCOCO2-216ENST00000509784 HOXB3P14651 431 aaPredicted RBP6.41□□□□□ -1.38
CALCOCO2-216ENST00000509784 FBXW7Q969H0 707 aa6.41□□□□□ -1.38
CALCOCO2-216ENST00000509784 JPH4Q96JJ6 628 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms