RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 PSEN1P49768 467 aa8.26□□□□□ -1.09
UBE2D3-226ENST00000508635 DPY19L2Q6NUT2 758 aa8.25□□□□□ -1.09
UBE2D3-226ENST00000508635 ANKRD13DQ6ZTN6 518 aa8.25□□□□□ -1.09
UBE2D3-226ENST00000508635 HCSTQ9UBK5 93 aa8.25□□□□□ -1.09
UBE2D3-226ENST00000508635 VGFO15240 615 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-226ENST00000508635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-226ENST00000508635 CHGAP10645 457 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-226ENST00000508635 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
UBE2D3-226ENST00000508635 ZFP91Q96JP5 570 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-226ENST00000508635 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-226ENST00000508635 STK25O00506 426 aa8.18□□□□□ -1.1
UBE2D3-226ENST00000508635 GPR153Q6NV75 609 aa8.18□□□□□ -1.1
UBE2D3-226ENST00000508635 TAOK2Q9UL54 1235 aa8.18□□□□□ -1.1
UBE2D3-226ENST00000508635 RGS20O76081 388 aa8.17□□□□□ -1.1
UBE2D3-226ENST00000508635 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-226ENST00000508635 CABP2Q9NPB3 220 aa8.16□□□□□ -1.1
UBE2D3-226ENST00000508635 STK24Q9Y6E0 443 aa8.16□□□□□ -1.1
UBE2D3-226ENST00000508635 PBX2P40425 430 aa8.15□□□□□ -1.1
UBE2D3-226ENST00000508635 HS6ST3Q8IZP7 471 aa8.13□□□□□ -1.11
UBE2D3-226ENST00000508635 ZNF316A6NFI3 1004 aaPredicted RBP8.11□□□□□ -1.11
UBE2D3-226ENST00000508635 TMEM92Q6UXU6 159 aa8.1□□□□□ -1.11
UBE2D3-226ENST00000508635 EFCAB3Q8N7B9 438 aa8.1□□□□□ -1.11
UBE2D3-226ENST00000508635 IRX2Q9BZI1 471 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-226ENST00000508635 MS4A4AQ96JQ5 239 aa8.09□□□□□ -1.11
UBE2D3-226ENST00000508635 BBXQ8WY36 941 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-226ENST00000508635 NKX1-1Q15270 411 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-226ENST00000508635 ARSIQ5FYB1 569 aa8.05□□□□□ -1.12
UBE2D3-226ENST00000508635 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-226ENST00000508635 PAXIP1Q6ZW49 1069 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-226ENST00000508635 MICALL2Q8IY33 904 aa8.02□□□□□ -1.13
UBE2D3-226ENST00000508635 CFAP44Q96MT7 982 aa8.02□□□□□ -1.13
UBE2D3-226ENST00000508635 IFFO2Q5TF58 517 aa8□□□□□ -1.13
UBE2D3-226ENST00000508635 DNAJC5Q9H3Z4 198 aa8□□□□□ -1.13
UBE2D3-226ENST00000508635 PHF8Q9UPP1 1060 aa8□□□□□ -1.13
UBE2D3-226ENST00000508635 MFRPQ9BY79 579 aa7.99□□□□□ -1.13
UBE2D3-226ENST00000508635 SPRYD3Q8NCJ5 442 aa7.98□□□□□ -1.13
UBE2D3-226ENST00000508635 FBXO22Q8NEZ5 403 aa7.98□□□□□ -1.13
UBE2D3-226ENST00000508635 SOX12O15370 315 aa7.97□□□□□ -1.13
UBE2D3-226ENST00000508635 ADGRD1Q6QNK2 874 aa7.97□□□□□ -1.13
UBE2D3-226ENST00000508635 GTPBP6O43824 516 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-226ENST00000508635 PLCB2Q00722 1185 aa7.96□□□□□ -1.14
UBE2D3-226ENST00000508635 TK2O00142 265 aa7.95□□□□□ -1.14
UBE2D3-226ENST00000508635 NLRP6P59044 892 aa7.95□□□□□ -1.14
UBE2D3-226ENST00000508635 ARHGAP33O14559 1287 aa7.92□□□□□ -1.14
UBE2D3-226ENST00000508635 PSDA5PKW4 1024 aaPredicted RBP7.91□□□□□ -1.14
UBE2D3-226ENST00000508635 PPP1R37O75864 691 aa7.91□□□□□ -1.14
UBE2D3-226ENST00000508635 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
UBE2D3-226ENST00000508635 KHSRPQ92945 711 aaKnown RBP eCLIP7.91□□□□□ -1.143e-7■■■■□ 19.3
UBE2D3-226ENST00000508635 AXIN2Q9Y2T1 843 aa7.91□□□□□ -1.14
UBE2D3-226ENST00000508635 RYDENQ9NUL5 291 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-226ENST00000508635 HAP1P54257 671 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-226ENST00000508635 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
UBE2D3-226ENST00000508635 A0A0G2JS52 829 aa7.88□□□□□ -1.15
UBE2D3-226ENST00000508635 KIF3CO14782 793 aa7.88□□□□□ -1.15
UBE2D3-226ENST00000508635 HRO43593 1189 aa7.88□□□□□ -1.15
UBE2D3-226ENST00000508635 NUDT7P0C024 238 aa7.87□□□□□ -1.15
UBE2D3-226ENST00000508635 KCTD12Q96CX2 325 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-226ENST00000508635 LHX6Q9UPM6 363 aa7.87□□□□□ -1.15
UBE2D3-226ENST00000508635 TSHZ2Q9NRE2 1034 aa7.86□□□□□ -1.15
UBE2D3-226ENST00000508635 Q6ZNB5 142 aa7.85□□□□□ -1.15
UBE2D3-226ENST00000508635 SLC34A2O95436 690 aa7.83□□□□□ -1.16
UBE2D3-226ENST00000508635 C2orf72A6NCS6 295 aa7.8□□□□□ -1.16
UBE2D3-226ENST00000508635 PCDHGA4Q9Y5G9 962 aa7.8□□□□□ -1.16
UBE2D3-226ENST00000508635 SLC24A1O60721 1099 aa7.79□□□□□ -1.16
UBE2D3-226ENST00000508635 LAPTM4AQ15012 233 aa7.79□□□□□ -1.16
UBE2D3-226ENST00000508635 CADPS2Q86UW7 1296 aa7.79□□□□□ -1.16
UBE2D3-226ENST00000508635 PTPN5P54829 565 aa7.77□□□□□ -1.17
UBE2D3-226ENST00000508635 KDM4FA0A1W2PPD8 638 aa7.76□□□□□ -1.17
UBE2D3-226ENST00000508635 KCNH8Q96L42 1107 aa7.76□□□□□ -1.17
UBE2D3-226ENST00000508635 DMRTA1Q5VZB9 504 aa7.74□□□□□ -1.17
UBE2D3-226ENST00000508635 KDM2AQ9Y2K7 1162 aa7.72□□□□□ -1.17
UBE2D3-226ENST00000508635 PSEN2P49810 448 aa7.71□□□□□ -1.18
UBE2D3-226ENST00000508635 NCKAP5LQ9HCH0 1330 aa7.71□□□□□ -1.18
UBE2D3-226ENST00000508635 PPP4R3BQ5MIZ7 849 aa7.7□□□□□ -1.18
UBE2D3-226ENST00000508635 LARP6Q9BRS8 491 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-226ENST00000508635 PDE4AP27815 886 aa7.69□□□□□ -1.18
UBE2D3-226ENST00000508635 THSD4Q6ZMP0 1018 aa7.69□□□□□ -1.18
UBE2D3-226ENST00000508635 VSIG10Q8N0Z9 540 aa7.69□□□□□ -1.18
UBE2D3-226ENST00000508635 TMC2Q8TDI7 906 aa7.69□□□□□ -1.18
UBE2D3-226ENST00000508635 TRAF7Q6Q0C0 670 aa7.68□□□□□ -1.18
UBE2D3-226ENST00000508635 CRISPLD2Q9H0B8 497 aa7.68□□□□□ -1.18
UBE2D3-226ENST00000508635 GPHNQ9NQX3 736 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-226ENST00000508635 WDR70Q9NW82 654 aa7.66□□□□□ -1.18
UBE2D3-226ENST00000508635 VPS9D1Q9Y2B5 631 aa7.66□□□□□ -1.18
UBE2D3-226ENST00000508635 GOLGA8CPA6NN73 597 aa7.65□□□□□ -1.18
UBE2D3-226ENST00000508635 DDX27Q96GQ7 796 aaKnown RBP7.65□□□□□ -1.18
UBE2D3-226ENST00000508635 SLC4A5Q9BY07 1137 aa7.65□□□□□ -1.18
UBE2D3-226ENST00000508635 DSG2Q14126 1118 aa7.64□□□□□ -1.19
UBE2D3-226ENST00000508635 PPP1R15BQ5SWA1 713 aa7.63□□□□□ -1.19
UBE2D3-226ENST00000508635 ITGBL1O95965 494 aaPredicted RBP7.62□□□□□ -1.19
UBE2D3-226ENST00000508635 FOXK1P85037 733 aa7.62□□□□□ -1.19
UBE2D3-226ENST00000508635 PLPP6Q8IY26 295 aa7.62□□□□□ -1.19
UBE2D3-226ENST00000508635 PTCD2Q8WV60 388 aaKnown RBP7.62□□□□□ -1.19
UBE2D3-226ENST00000508635 WNT2BQ93097 391 aa7.62□□□□□ -1.19
UBE2D3-226ENST00000508635 MFSD10Q14728 455 aa7.61□□□□□ -1.19
UBE2D3-226ENST00000508635 KCNK17Q96T54 332 aa7.61□□□□□ -1.19
UBE2D3-226ENST00000508635 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
UBE2D3-226ENST00000508635 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
UBE2D3-226ENST00000508635 BHMG1C9JSJ3 638 aaPredicted RBP7.58□□□□□ -1.2
UBE2D3-226ENST00000508635 E2F4Q16254 413 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms