RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
CCDC149-206ENST00000508236 KDM4CQ9H3R0 1056 aa12.86□□□□□ -0.35
CCDC149-206ENST00000508236 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
CCDC149-206ENST00000508236 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
CCDC149-206ENST00000508236 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
CCDC149-206ENST00000508236 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
CCDC149-206ENST00000508236 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
CCDC149-206ENST00000508236 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
CCDC149-206ENST00000508236 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
CCDC149-206ENST00000508236 TRIM66O15016 1216 aa12.8□□□□□ -0.36
CCDC149-206ENST00000508236 PDE4DQ08499 809 aa12.79□□□□□ -0.36
CCDC149-206ENST00000508236 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
CCDC149-206ENST00000508236 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-206ENST00000508236 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
CCDC149-206ENST00000508236 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
CCDC149-206ENST00000508236 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
CCDC149-206ENST00000508236 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
CCDC149-206ENST00000508236 DPYSL4O14531 572 aa12.67□□□□□ -0.38
CCDC149-206ENST00000508236 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
CCDC149-206ENST00000508236 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
CCDC149-206ENST00000508236 FAM117AQ9C073 453 aa12.66□□□□□ -0.38
CCDC149-206ENST00000508236 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
CCDC149-206ENST00000508236 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC149-206ENST00000508236 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
CCDC149-206ENST00000508236 PDIA6Q15084 440 aa12.64□□□□□ -0.39
CCDC149-206ENST00000508236 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
CCDC149-206ENST00000508236 ARID3AQ99856 593 aa12.63□□□□□ -0.39
CCDC149-206ENST00000508236 TMEM106CQ9BVX2 250 aa12.63□□□□□ -0.39
CCDC149-206ENST00000508236 GPR37O15354 613 aa12.62□□□□□ -0.39
CCDC149-206ENST00000508236 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
CCDC149-206ENST00000508236 RANGAP1P46060 587 aaPredicted RBP12.6□□□□□ -0.39
CCDC149-206ENST00000508236 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
CCDC149-206ENST00000508236 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
CCDC149-206ENST00000508236 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
CCDC149-206ENST00000508236 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
CCDC149-206ENST00000508236 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
CCDC149-206ENST00000508236 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
CCDC149-206ENST00000508236 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
CCDC149-206ENST00000508236 FLIIQ13045 1269 aa12.56□□□□□ -0.4
CCDC149-206ENST00000508236 HRCP23327 699 aa12.55□□□□□ -0.4
CCDC149-206ENST00000508236 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
CCDC149-206ENST00000508236 DSG2Q14126 1118 aa12.55□□□□□ -0.4
CCDC149-206ENST00000508236 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
CCDC149-206ENST00000508236 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
CCDC149-206ENST00000508236 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
CCDC149-206ENST00000508236 IRF6O14896 467 aa12.53□□□□□ -0.4
CCDC149-206ENST00000508236 AMHR2Q16671 573 aa12.53□□□□□ -0.4
CCDC149-206ENST00000508236 WIZO95785 1651 aa12.53□□□□□ -0.4
CCDC149-206ENST00000508236 NUTM2FA1L443 756 aa12.52□□□□□ -0.41
CCDC149-206ENST00000508236 ARID3CA6NKF2 412 aa12.52□□□□□ -0.41
CCDC149-206ENST00000508236 APBB1O00213 710 aa12.52□□□□□ -0.41
CCDC149-206ENST00000508236 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
CCDC149-206ENST00000508236 PARP9Q8IXQ6 854 aa12.51□□□□□ -0.41
CCDC149-206ENST00000508236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC149-206ENST00000508236 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
CCDC149-206ENST00000508236 GRXCR2A6NFK2 248 aa12.48□□□□□ -0.41
CCDC149-206ENST00000508236 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
CCDC149-206ENST00000508236 FOXK1P85037 733 aa12.48□□□□□ -0.41
CCDC149-206ENST00000508236 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
CCDC149-206ENST00000508236 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
CCDC149-206ENST00000508236 LOC105371045A0A1W2PR82 267 aa12.46□□□□□ -0.41
CCDC149-206ENST00000508236 GNPATO15228 680 aa12.46□□□□□ -0.41
CCDC149-206ENST00000508236 MS4A3Q96HJ5 214 aa12.44□□□□□ -0.42
CCDC149-206ENST00000508236 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
CCDC149-206ENST00000508236 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
CCDC149-206ENST00000508236 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
CCDC149-206ENST00000508236 HIC1Q14526 733 aa12.42□□□□□ -0.42
CCDC149-206ENST00000508236 PLPP6Q8IY26 295 aa12.42□□□□□ -0.42
CCDC149-206ENST00000508236 FCHSD2O94868 740 aa12.41□□□□□ -0.42
CCDC149-206ENST00000508236 OSBPP22059 807 aa12.41□□□□□ -0.42
CCDC149-206ENST00000508236 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
CCDC149-206ENST00000508236 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
CCDC149-206ENST00000508236 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
CCDC149-206ENST00000508236 A6NJR5 290 aa12.4□□□□□ -0.42
CCDC149-206ENST00000508236 TIE1P35590 1138 aa12.4□□□□□ -0.42
CCDC149-206ENST00000508236 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
CCDC149-206ENST00000508236 FECHP22830 423 aa12.39□□□□□ -0.43
CCDC149-206ENST00000508236 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
CCDC149-206ENST00000508236 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
CCDC149-206ENST00000508236 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
CCDC149-206ENST00000508236 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
CCDC149-206ENST00000508236 TRAK2O60296 914 aa12.37□□□□□ -0.43
CCDC149-206ENST00000508236 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
CCDC149-206ENST00000508236 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
CCDC149-206ENST00000508236 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
CCDC149-206ENST00000508236 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
CCDC149-206ENST00000508236 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
CCDC149-206ENST00000508236 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
CCDC149-206ENST00000508236 C2orf72A6NCS6 295 aa12.33□□□□□ -0.44
CCDC149-206ENST00000508236 PTGER2P43116 358 aa12.33□□□□□ -0.44
CCDC149-206ENST00000508236 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
CCDC149-206ENST00000508236 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
CCDC149-206ENST00000508236 MS4A1P11836 297 aa12.32□□□□□ -0.44
CCDC149-206ENST00000508236 ZBTB7CA1YPR0 619 aa12.31□□□□□ -0.44
CCDC149-206ENST00000508236 KIF3CO14782 793 aa12.31□□□□□ -0.44
CCDC149-206ENST00000508236 DDX12PQ92771 950 aa12.3□□□□□ -0.44
CCDC149-206ENST00000508236 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
CCDC149-206ENST00000508236 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
CCDC149-206ENST00000508236 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
CCDC149-206ENST00000508236 PTGDRQ13258 359 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms