RNA–Protein interactions for RNA: ENST00000506648.1

PACRGL-214, Transcript of parkin coregulated like, humanhuman

TSL 2

Gene PACRGL, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-214ENST00000506648 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
PACRGL-214ENST00000506648 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
PACRGL-214ENST00000506648 PHF8Q9UPP1 1060 aa8.76□□□□□ -1.01
PACRGL-214ENST00000506648 RIMBP2O15034 1052 aa8.75□□□□□ -1.01
PACRGL-214ENST00000506648 MFRPQ9BY79 579 aa8.74□□□□□ -1.01
PACRGL-214ENST00000506648 HS6ST3Q8IZP7 471 aa8.73□□□□□ -1.01
PACRGL-214ENST00000506648 DNAJC5Q9H3Z4 198 aa8.72□□□□□ -1.01
PACRGL-214ENST00000506648 ZSWIM6Q9HCJ5 1215 aa8.72□□□□□ -1.01
PACRGL-214ENST00000506648 ERBB3P21860 1342 aa8.72□□□□□ -1.01
PACRGL-214ENST00000506648 NLRP6P59044 892 aa8.71□□□□□ -1.02
PACRGL-214ENST00000506648 MICALL2Q8IY33 904 aa8.69□□□□□ -1.02
PACRGL-214ENST00000506648 CHGAP10645 457 aaKnown RBP8.67□□□□□ -1.02
PACRGL-214ENST00000506648 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
PACRGL-214ENST00000506648 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
PACRGL-214ENST00000506648 TMEM92Q6UXU6 159 aa8.66□□□□□ -1.02
PACRGL-214ENST00000506648 NKX1-1Q15270 411 aaPredicted RBP8.65□□□□□ -1.02
PACRGL-214ENST00000506648 RNF166Q96A37 237 aaPredicted RBP8.65□□□□□ -1.02
PACRGL-214ENST00000506648 RTN4Q9NQC3 1192 aaKnown RBP8.65□□□□□ -1.02
PACRGL-214ENST00000506648 ZNF687Q8N1G0 1237 aa8.63□□□□□ -1.03
PACRGL-214ENST00000506648 GPR153Q6NV75 609 aa8.62□□□□□ -1.03
PACRGL-214ENST00000506648 PPP1R37O75864 691 aa8.61□□□□□ -1.03
PACRGL-214ENST00000506648 PTGER2P43116 358 aa8.61□□□□□ -1.03
PACRGL-214ENST00000506648 MYT1LQ9UL68 1186 aa8.6□□□□□ -1.03
PACRGL-214ENST00000506648 KIF3CO14782 793 aa8.54□□□□□ -1.04
PACRGL-214ENST00000506648 GTPBP6O43824 516 aaPredicted RBP8.54□□□□□ -1.04
PACRGL-214ENST00000506648 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
PACRGL-214ENST00000506648 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
PACRGL-214ENST00000506648 DCAF8L2P0C7V8 631 aa8.51□□□□□ -1.05
PACRGL-214ENST00000506648 RYDENQ9NUL5 291 aaKnown RBP8.5□□□□□ -1.05
PACRGL-214ENST00000506648 C2orf72A6NCS6 295 aa8.48□□□□□ -1.05
PACRGL-214ENST00000506648 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
PACRGL-214ENST00000506648 PBX2P40425 430 aa8.47□□□□□ -1.05
PACRGL-214ENST00000506648 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
PACRGL-214ENST00000506648 BBXQ8WY36 941 aaPredicted RBP8.46□□□□□ -1.06
PACRGL-214ENST00000506648 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
PACRGL-214ENST00000506648 SLC34A2O95436 690 aa8.44□□□□□ -1.06
PACRGL-214ENST00000506648 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
PACRGL-214ENST00000506648 TMC2Q8TDI7 906 aa8.42□□□□□ -1.06
PACRGL-214ENST00000506648 NUDT7P0C024 238 aa8.41□□□□□ -1.06
PACRGL-214ENST00000506648 FOXK1P85037 733 aa8.4□□□□□ -1.06
PACRGL-214ENST00000506648 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
PACRGL-214ENST00000506648 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
PACRGL-214ENST00000506648 LHX6Q9UPM6 363 aa8.38□□□□□ -1.07
PACRGL-214ENST00000506648 PCDHGA4Q9Y5G9 962 aa8.38□□□□□ -1.07
PACRGL-214ENST00000506648 PSDA5PKW4 1024 aaPredicted RBP8.37□□□□□ -1.07
PACRGL-214ENST00000506648 DSG2Q14126 1118 aa8.37□□□□□ -1.07
PACRGL-214ENST00000506648 POTEEQ6S8J3 1075 aa8.37□□□□□ -1.07
PACRGL-214ENST00000506648 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
PACRGL-214ENST00000506648 PLPP6Q8IY26 295 aa8.35□□□□□ -1.07
PACRGL-214ENST00000506648 KDM4FA0A1W2PPD8 638 aa8.33□□□□□ -1.08
PACRGL-214ENST00000506648 PDE4AP27815 886 aa8.33□□□□□ -1.08
PACRGL-214ENST00000506648 SPRYD3Q8NCJ5 442 aa8.33□□□□□ -1.08
PACRGL-214ENST00000506648 PTCD2Q8WV60 388 aaKnown RBP8.33□□□□□ -1.08
PACRGL-214ENST00000506648 HCSTQ9UBK5 93 aa8.33□□□□□ -1.08
PACRGL-214ENST00000506648 ARHGAP33O14559 1287 aa8.32□□□□□ -1.08
PACRGL-214ENST00000506648 MFSD10Q14728 455 aa8.32□□□□□ -1.08
PACRGL-214ENST00000506648 ADGRD1Q6QNK2 874 aa8.32□□□□□ -1.08
PACRGL-214ENST00000506648 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
PACRGL-214ENST00000506648 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
PACRGL-214ENST00000506648 PLA2G2EQ9NZK7 142 aa8.31□□□□□ -1.08
PACRGL-214ENST00000506648 TK2O00142 265 aa8.3□□□□□ -1.08
PACRGL-214ENST00000506648 PPP1R15BQ5SWA1 713 aa8.29□□□□□ -1.08
PACRGL-214ENST00000506648 PAXIP1Q6ZW49 1069 aaPredicted RBP8.28□□□□□ -1.08
PACRGL-214ENST00000506648 LARP6Q9BRS8 491 aaKnown RBP8.28□□□□□ -1.08
PACRGL-214ENST00000506648 OXER1Q8TDS5 423 aa8.27□□□□□ -1.09
PACRGL-214ENST00000506648 HRO43593 1189 aa8.25□□□□□ -1.09
PACRGL-214ENST00000506648 DDX27Q96GQ7 796 aaKnown RBP8.25□□□□□ -1.09
PACRGL-214ENST00000506648 CFAP44Q96MT7 982 aa8.25□□□□□ -1.09
PACRGL-214ENST00000506648 TBC1D12O60347 775 aa8.23□□□□□ -1.09
PACRGL-214ENST00000506648 PPP4R3BQ5MIZ7 849 aa8.23□□□□□ -1.09
PACRGL-214ENST00000506648 CAMK2BQ13554 666 aa8.22□□□□□ -1.09
PACRGL-214ENST00000506648 DMRTA1Q5VZB9 504 aa8.21□□□□□ -1.1
PACRGL-214ENST00000506648 EMILIN3Q9NT22 766 aa8.21□□□□□ -1.1
PACRGL-214ENST00000506648 PSEN2P49810 448 aa8.2□□□□□ -1.1
PACRGL-214ENST00000506648 UPF1Q92900 1129 aaKnown RBP eCLIP8.19□□□□□ -1.1
PACRGL-214ENST00000506648 KCNH8Q96L42 1107 aa8.19□□□□□ -1.1
PACRGL-214ENST00000506648 ANO8Q9HCE9 1232 aaPredicted RBP8.19□□□□□ -1.1
PACRGL-214ENST00000506648 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
PACRGL-214ENST00000506648 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
PACRGL-214ENST00000506648 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
PACRGL-214ENST00000506648 KCNK17Q96T54 332 aa8.14□□□□□ -1.11
PACRGL-214ENST00000506648 EVI5O60447 810 aa8.13□□□□□ -1.11
PACRGL-214ENST00000506648 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
PACRGL-214ENST00000506648 MAP3K9P80192 1104 aa8.12□□□□□ -1.11
PACRGL-214ENST00000506648 IFFO2Q5TF58 517 aa8.12□□□□□ -1.11
PACRGL-214ENST00000506648 VPS9D1Q9Y2B5 631 aa8.12□□□□□ -1.11
PACRGL-214ENST00000506648 RGS20O76081 388 aa8.11□□□□□ -1.11
PACRGL-214ENST00000506648 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
PACRGL-214ENST00000506648 FOSBP53539 338 aa8.1□□□□□ -1.11
PACRGL-214ENST00000506648 ARIH1Q9Y4X5 557 aaPredicted RBP8.1□□□□□ -1.11
PACRGL-214ENST00000506648 PLCB2Q00722 1185 aa8.09□□□□□ -1.11
PACRGL-214ENST00000506648 ZNF454Q8N9F8 522 aa8.09□□□□□ -1.11
PACRGL-214ENST00000506648 E2F4Q16254 413 aa8.08□□□□□ -1.12
PACRGL-214ENST00000506648 DPYSL4O14531 572 aa8.07□□□□□ -1.12
PACRGL-214ENST00000506648 JPH4Q96JJ6 628 aa8.07□□□□□ -1.12
PACRGL-214ENST00000506648 BHMG1C9JSJ3 638 aaPredicted RBP8.06□□□□□ -1.12
PACRGL-214ENST00000506648 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
PACRGL-214ENST00000506648 PTPREP23469 700 aa8.05□□□□□ -1.12
PACRGL-214ENST00000506648 PTPN5P54829 565 aa8.05□□□□□ -1.12
PACRGL-214ENST00000506648 WDR70Q9NW82 654 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms