RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.436e-6■□□□□ 8.2
HTT-203ENST00000506137 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
HTT-203ENST00000506137 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
HTT-203ENST00000506137 TEX2Q8IWB9 1127 aa12.35□□□□□ -0.43
HTT-203ENST00000506137 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
HTT-203ENST00000506137 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
HTT-203ENST00000506137 MTMR7Q9Y216 660 aa12.35□□□□□ -0.43
HTT-203ENST00000506137 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
HTT-203ENST00000506137 TMCO4Q5TGY1 634 aa12.34□□□□□ -0.43
HTT-203ENST00000506137 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
HTT-203ENST00000506137 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
HTT-203ENST00000506137 MCCP23508 829 aa12.32□□□□□ -0.44
HTT-203ENST00000506137 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
HTT-203ENST00000506137 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
HTT-203ENST00000506137 NEFMP07197 916 aa12.31□□□□□ -0.44
HTT-203ENST00000506137 TRAIPQ9BWF2 469 aa12.31□□□□□ -0.44
HTT-203ENST00000506137 FANCD2Q9BXW9 1451 aa12.31□□□□□ -0.44
HTT-203ENST00000506137 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
HTT-203ENST00000506137 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
HTT-203ENST00000506137 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
HTT-203ENST00000506137 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
HTT-203ENST00000506137 MAFGO15525 162 aa12.29□□□□□ -0.44
HTT-203ENST00000506137 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
HTT-203ENST00000506137 CHRM1P11229 460 aaPredicted RBP12.26□□□□□ -0.45
HTT-203ENST00000506137 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
HTT-203ENST00000506137 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
HTT-203ENST00000506137 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
HTT-203ENST00000506137 CCDC125Q86Z20 511 aa12.24□□□□□ -0.45
HTT-203ENST00000506137 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
HTT-203ENST00000506137 MFAP1P55081 439 aaKnown RBP12.23□□□□□ -0.45
HTT-203ENST00000506137 RBM10P98175 930 aaKnown RBP12.23□□□□□ -0.45
HTT-203ENST00000506137 FAM69CQ0P6D2 419 aa12.23□□□□□ -0.45
HTT-203ENST00000506137 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
HTT-203ENST00000506137 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
HTT-203ENST00000506137 APBB1O00213 710 aa12.22□□□□□ -0.45
HTT-203ENST00000506137 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.45
HTT-203ENST00000506137 RNF39Q9H2S5 420 aa12.21□□□□□ -0.45
HTT-203ENST00000506137 ZCCHC6Q5VYS8 1495 aaKnown RBP12.21□□□□□ -0.46
HTT-203ENST00000506137 PRDM16Q9HAZ2 1276 aa12.2□□□□□ -0.46
HTT-203ENST00000506137 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
HTT-203ENST00000506137 ANAPC15P60006 121 aa12.18□□□□□ -0.46
HTT-203ENST00000506137 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
HTT-203ENST00000506137 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
HTT-203ENST00000506137 TSPOAP1O95153 1857 aa12.18□□□□□ -0.46
HTT-203ENST00000506137 FOXD4L5Q5VV16 416 aaPredicted RBP12.17□□□□□ -0.46
HTT-203ENST00000506137 TMED8Q6PL24 325 aaPredicted RBP12.17□□□□□ -0.46
HTT-203ENST00000506137 FOXD4L4Q8WXT5 416 aaPredicted RBP12.17□□□□□ -0.46
HTT-203ENST00000506137 HSP90AB4PQ58FF6 505 aa12.16□□□□□ -0.46
HTT-203ENST00000506137 PEG3Q9GZU2 1588 aa12.14□□□□□ -0.47
HTT-203ENST00000506137 DIP2BQ9P265 1576 aa12.14□□□□□ -0.47
HTT-203ENST00000506137 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
HTT-203ENST00000506137 AEBP1Q8IUX7 1158 aa12.13□□□□□ -0.47
HTT-203ENST00000506137 ZNF428Q96B54 188 aa12.13□□□□□ -0.47
HTT-203ENST00000506137 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
HTT-203ENST00000506137 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
HTT-203ENST00000506137 GPATCH11Q8N954 259 aa12.11□□□□□ -0.47
HTT-203ENST00000506137 IPO4Q8TEX9 1081 aaKnown RBP12.11□□□□□ -0.47
HTT-203ENST00000506137 PLEKHD1A6NEE1 506 aa12.1□□□□□ -0.47
HTT-203ENST00000506137 ZNF526Q8TF50 670 aaPredicted RBP12.1□□□□□ -0.47
HTT-203ENST00000506137 C1QBPQ07021 282 aaKnown RBP12.09□□□□□ -0.47
HTT-203ENST00000506137 ARID3CA6NKF2 412 aa12.08□□□□□ -0.48
HTT-203ENST00000506137 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
HTT-203ENST00000506137 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
HTT-203ENST00000506137 AQRO60306 1485 aaKnown RBP eCLIP12.08□□□□□ -0.48
HTT-203ENST00000506137 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
HTT-203ENST00000506137 PCF11O94913 1555 aaKnown RBP12.06□□□□□ -0.48
HTT-203ENST00000506137 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
HTT-203ENST00000506137 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
HTT-203ENST00000506137 HMGB1P1B2RPK0 211 aaPredicted RBP12.05□□□□□ -0.48
HTT-203ENST00000506137 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
HTT-203ENST00000506137 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
HTT-203ENST00000506137 ANKRD13AQ8IZ07 590 aa12.05□□□□□ -0.48
HTT-203ENST00000506137 GZF1Q9H116 711 aaPredicted RBP12.05□□□□□ -0.48
HTT-203ENST00000506137 PRDM10Q9NQV6 1147 aa12.03□□□□□ -0.48
HTT-203ENST00000506137 AMOTL2Q9Y2J4 779 aa12.03□□□□□ -0.48
HTT-203ENST00000506137 MAPKBP1O60336 1514 aa12.02□□□□□ -0.48
HTT-203ENST00000506137 FTSJ3Q8IY81 847 aaKnown RBP12□□□□□ -0.49
HTT-203ENST00000506137 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
HTT-203ENST00000506137 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
HTT-203ENST00000506137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
HTT-203ENST00000506137 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
HTT-203ENST00000506137 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
HTT-203ENST00000506137 KDM4AO75164 1064 aa11.97□□□□□ -0.49
HTT-203ENST00000506137 PHF14O94880 888 aa11.97□□□□□ -0.49
HTT-203ENST00000506137 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
HTT-203ENST00000506137 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
HTT-203ENST00000506137 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
HTT-203ENST00000506137 CCDC82Q8N4S0 544 aa11.97□□□□□ -0.49
HTT-203ENST00000506137 MYH16Q9H6N6 1097 aa11.97□□□□□ -0.49
HTT-203ENST00000506137 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.49
HTT-203ENST00000506137 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.5
HTT-203ENST00000506137 CFTRP13569 1480 aa11.95□□□□□ -0.5
HTT-203ENST00000506137 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
HTT-203ENST00000506137 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
HTT-203ENST00000506137 PATL2C9JE40 543 aaKnown RBP11.94□□□□□ -0.5
HTT-203ENST00000506137 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
HTT-203ENST00000506137 FBXW7Q969H0 707 aa11.94□□□□□ -0.5
HTT-203ENST00000506137 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
HTT-203ENST00000506137 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
HTT-203ENST00000506137 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms