RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
SMN2-204ENST00000503678 GPR153Q6NV75 609 aa10.12□□□□□ -0.79
SMN2-204ENST00000503678 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
SMN2-204ENST00000503678 BCANQ96GW7 911 aa10.11□□□□□ -0.79
SMN2-204ENST00000503678 TMEM92Q6UXU6 159 aa10.08□□□□□ -0.8
SMN2-204ENST00000503678 MICALL2Q8IY33 904 aa10.08□□□□□ -0.8
SMN2-204ENST00000503678 BBXQ8WY36 941 aaPredicted RBP10.08□□□□□ -0.8
SMN2-204ENST00000503678 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
SMN2-204ENST00000503678 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
SMN2-204ENST00000503678 SOX12O15370 315 aa10.03□□□□□ -0.8
SMN2-204ENST00000503678 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
SMN2-204ENST00000503678 TRIM41Q8WV44 630 aa10.02□□□□□ -0.81
SMN2-204ENST00000503678 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
SMN2-204ENST00000503678 ZNF316A6NFI3 1004 aaPredicted RBP9.98□□□□□ -0.81
SMN2-204ENST00000503678 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMN2-204ENST00000503678 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.82
SMN2-204ENST00000503678 MS4A4AQ96JQ5 239 aa9.96□□□□□ -0.82
SMN2-204ENST00000503678 TAOK2Q9UL54 1235 aa9.94□□□□□ -0.82
SMN2-204ENST00000503678 RGL2O15211 777 aa9.93□□□□□ -0.82
SMN2-204ENST00000503678 CFAP44Q96MT7 982 aa9.93□□□□□ -0.82
SMN2-204ENST00000503678 KDM2AQ9Y2K7 1162 aa9.92□□□□□ -0.82
SMN2-204ENST00000503678 PBX2P40425 430 aa9.91□□□□□ -0.82
SMN2-204ENST00000503678 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMN2-204ENST00000503678 PHF8Q9UPP1 1060 aa9.91□□□□□ -0.82
SMN2-204ENST00000503678 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
SMN2-204ENST00000503678 PLA2G2EQ9NZK7 142 aa9.89□□□□□ -0.83
SMN2-204ENST00000503678 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
SMN2-204ENST00000503678 HCSTQ9UBK5 93 aa9.87□□□□□ -0.83
SMN2-204ENST00000503678 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
SMN2-204ENST00000503678 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
SMN2-204ENST00000503678 ZFP91Q96JP5 570 aaPredicted RBP9.86□□□□□ -0.83
SMN2-204ENST00000503678 VGFO15240 615 aaPredicted RBP9.85□□□□□ -0.83
SMN2-204ENST00000503678 NLRP6P59044 892 aa9.83□□□□□ -0.84
SMN2-204ENST00000503678 CHGAP10645 457 aaKnown RBP9.82□□□□□ -0.84
SMN2-204ENST00000503678 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
SMN2-204ENST00000503678 RNF25Q96BH1 459 aaPredicted RBP9.82□□□□□ -0.84
SMN2-204ENST00000503678 NUDT7P0C024 238 aa9.81□□□□□ -0.84
SMN2-204ENST00000503678 AXIN2Q9Y2T1 843 aa9.81□□□□□ -0.84
SMN2-204ENST00000503678 KIF3CO14782 793 aa9.8□□□□□ -0.84
SMN2-204ENST00000503678 TSHZ2Q9NRE2 1034 aa9.8□□□□□ -0.84
SMN2-204ENST00000503678 LHX6Q9UPM6 363 aa9.8□□□□□ -0.84
SMN2-204ENST00000503678 SLC34A2O95436 690 aa9.79□□□□□ -0.84
SMN2-204ENST00000503678 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
SMN2-204ENST00000503678 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
SMN2-204ENST00000503678 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
SMN2-204ENST00000503678 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
SMN2-204ENST00000503678 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
SMN2-204ENST00000503678 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
SMN2-204ENST00000503678 ADGRD1Q6QNK2 874 aa9.75□□□□□ -0.85
SMN2-204ENST00000503678 PSDA5PKW4 1024 aaPredicted RBP9.73□□□□□ -0.85
SMN2-204ENST00000503678 DNAJC5Q9H3Z4 198 aa9.73□□□□□ -0.85
SMN2-204ENST00000503678 TK2O00142 265 aa9.71□□□□□ -0.86
SMN2-204ENST00000503678 BCL11BQ9C0K0 894 aaPredicted RBP9.71□□□□□ -0.86
SMN2-204ENST00000503678 STK24Q9Y6E0 443 aa9.71□□□□□ -0.86
SMN2-204ENST00000503678 MFRPQ9BY79 579 aa9.7□□□□□ -0.86
SMN2-204ENST00000503678 STK25O00506 426 aa9.68□□□□□ -0.86
SMN2-204ENST00000503678 HRO43593 1189 aa9.68□□□□□ -0.86
SMN2-204ENST00000503678 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
SMN2-204ENST00000503678 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
SMN2-204ENST00000503678 NBR1Q14596 966 aa9.65□□□□□ -0.86
SMN2-204ENST00000503678 RGS20O76081 388 aa9.63□□□□□ -0.87
SMN2-204ENST00000503678 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
SMN2-204ENST00000503678 PSEN2P49810 448 aa9.61□□□□□ -0.87
SMN2-204ENST00000503678 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
SMN2-204ENST00000503678 KCTD12Q96CX2 325 aaKnown RBP9.61□□□□□ -0.87
SMN2-204ENST00000503678 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
SMN2-204ENST00000503678 NKX1-1Q15270 411 aaPredicted RBP9.57□□□□□ -0.88
SMN2-204ENST00000503678 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
SMN2-204ENST00000503678 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
SMN2-204ENST00000503678 PPP4R3BQ5MIZ7 849 aa9.55□□□□□ -0.88
SMN2-204ENST00000503678 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
SMN2-204ENST00000503678 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
SMN2-204ENST00000503678 TBC1D12O60347 775 aa9.51□□□□□ -0.89
SMN2-204ENST00000503678 PTPN5P54829 565 aa9.51□□□□□ -0.89
SMN2-204ENST00000503678 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
SMN2-204ENST00000503678 FOXK1P85037 733 aa9.5□□□□□ -0.89
SMN2-204ENST00000503678 VPS9D1Q9Y2B5 631 aa9.5□□□□□ -0.89
SMN2-204ENST00000503678 PPP1R37O75864 691 aa9.49□□□□□ -0.89
SMN2-204ENST00000503678 PLPP6Q8IY26 295 aa9.48□□□□□ -0.89
SMN2-204ENST00000503678 KCNK17Q96T54 332 aa9.48□□□□□ -0.89
SMN2-204ENST00000503678 SLC4A5Q9BY07 1137 aa9.47□□□□□ -0.89
SMN2-204ENST00000503678 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.9
SMN2-204ENST00000503678 A0A0G2JS52 829 aa9.45□□□□□ -0.9
SMN2-204ENST00000503678 BHMG1C9JSJ3 638 aaPredicted RBP9.43□□□□□ -0.9
SMN2-204ENST00000503678 THSD4Q6ZMP0 1018 aa9.43□□□□□ -0.9
SMN2-204ENST00000503678 DSG2Q14126 1118 aa9.4□□□□□ -0.9
SMN2-204ENST00000503678 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
SMN2-204ENST00000503678 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
SMN2-204ENST00000503678 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
SMN2-204ENST00000503678 WNT2BQ93097 391 aa9.37□□□□□ -0.91
SMN2-204ENST00000503678 MRPL50Q8N5N7 158 aaKnown RBP9.36□□□□□ -0.91
SMN2-204ENST00000503678 ZNF454Q8N9F8 522 aa9.36□□□□□ -0.91
SMN2-204ENST00000503678 OXER1Q8TDS5 423 aa9.36□□□□□ -0.91
SMN2-204ENST00000503678 PTPREP23469 700 aa9.35□□□□□ -0.91
SMN2-204ENST00000503678 ZBED2Q9BTP6 218 aa9.34□□□□□ -0.91
SMN2-204ENST00000503678 FOSBP53539 338 aa9.32□□□□□ -0.92
SMN2-204ENST00000503678 NBPF3Q9H094 633 aa9.3□□□□□ -0.92
SMN2-204ENST00000503678 ITGBL1O95965 494 aaPredicted RBP9.29□□□□□ -0.92
SMN2-204ENST00000503678 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
SMN2-204ENST00000503678 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms