RNA–Protein interactions for RNA: ENST00000497393.1

GTF2E1-205, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 1 (best)

Gene GTF2E1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-205ENST00000497393 IER5LQ5T953 404 aa8.99□□□□□ -0.97
GTF2E1-205ENST00000497393 OCEL1Q9H607 264 aa8.99□□□□□ -0.97
GTF2E1-205ENST00000497393 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
GTF2E1-205ENST00000497393 DSG2Q14126 1118 aa8.97□□□□□ -0.97
GTF2E1-205ENST00000497393 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
GTF2E1-205ENST00000497393 PLCG2P16885 1265 aa8.96□□□□□ -0.98
GTF2E1-205ENST00000497393 BOLA1Q9Y3E2 137 aa8.96□□□□□ -0.98
GTF2E1-205ENST00000497393 ARIH1Q9Y4X5 557 aaPredicted RBP8.96□□□□□ -0.98
GTF2E1-205ENST00000497393 SP7Q8TDD2 431 aaPredicted RBP8.95□□□□□ -0.98
GTF2E1-205ENST00000497393 TMEM121BQ9BXQ6 578 aaPredicted RBP8.95□□□□□ -0.98
GTF2E1-205ENST00000497393 TULP1O00294 542 aaPredicted RBP8.94□□□□□ -0.98
GTF2E1-205ENST00000497393 TMC2Q8TDI7 906 aa8.94□□□□□ -0.98
GTF2E1-205ENST00000497393 EMILIN3Q9NT22 766 aa8.94□□□□□ -0.98
GTF2E1-205ENST00000497393 COLQQ9Y215 455 aaPredicted RBP8.94□□□□□ -0.98
GTF2E1-205ENST00000497393 C2orf72A6NCS6 295 aa8.92□□□□□ -0.98
GTF2E1-205ENST00000497393 DPYSL4O14531 572 aa8.92□□□□□ -0.98
GTF2E1-205ENST00000497393 DCBLD2Q96PD2 775 aa8.92□□□□□ -0.98
GTF2E1-205ENST00000497393 FOXK1P85037 733 aa8.91□□□□□ -0.98
GTF2E1-205ENST00000497393 G3V3G9 751 aa8.9□□□□□ -0.98
GTF2E1-205ENST00000497393 KIF3CO14782 793 aa8.9□□□□□ -0.98
GTF2E1-205ENST00000497393 TMEM92Q6UXU6 159 aa8.9□□□□□ -0.98
GTF2E1-205ENST00000497393 POTEFA5A3E0 1075 aa8.89□□□□□ -0.99
GTF2E1-205ENST00000497393 SEC24BO95487 1268 aa8.89□□□□□ -0.99
GTF2E1-205ENST00000497393 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
GTF2E1-205ENST00000497393 PLPP6Q8IY26 295 aa8.89□□□□□ -0.99
GTF2E1-205ENST00000497393 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
GTF2E1-205ENST00000497393 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
GTF2E1-205ENST00000497393 PDIA6Q15084 440 aa8.86□□□□□ -0.99
GTF2E1-205ENST00000497393 SLC39A7Q92504 469 aa8.86□□□□□ -0.99
GTF2E1-205ENST00000497393 L3MBTL3Q96JM7 780 aaPredicted RBP8.86□□□□□ -0.99
GTF2E1-205ENST00000497393 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
GTF2E1-205ENST00000497393 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -0.99
GTF2E1-205ENST00000497393 SMYD5Q6GMV2 418 aa8.84□□□□□ -0.99
GTF2E1-205ENST00000497393 UPF1Q92900 1129 aaKnown RBP eCLIP8.83□□□□□ -1
GTF2E1-205ENST00000497393 C7P10643 843 aa8.82□□□□□ -1
GTF2E1-205ENST00000497393 SPDYE16A6NNV3 312 aaPredicted RBP8.81□□□□□ -1
GTF2E1-205ENST00000497393 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
GTF2E1-205ENST00000497393 ZMYND10O75800 440 aa8.78□□□□□ -1
GTF2E1-205ENST00000497393 GPIHBP1Q8IV16 184 aa8.78□□□□□ -1
GTF2E1-205ENST00000497393 MAP3K9P80192 1104 aa8.77□□□□□ -1.01
GTF2E1-205ENST00000497393 C3orf67Q6ZVT6 689 aa8.77□□□□□ -1.01
GTF2E1-205ENST00000497393 OXER1Q8TDS5 423 aa8.77□□□□□ -1.01
GTF2E1-205ENST00000497393 BRPF1P55201 1214 aaPredicted RBP8.76□□□□□ -1.01
GTF2E1-205ENST00000497393 GRXCR2A6NFK2 248 aa8.74□□□□□ -1.01
GTF2E1-205ENST00000497393 GPR37O15354 613 aa8.73□□□□□ -1.01
GTF2E1-205ENST00000497393 BARGINQ6ZT62 677 aa8.73□□□□□ -1.01
GTF2E1-205ENST00000497393 DDX12PQ92771 950 aa8.71□□□□□ -1.02
GTF2E1-205ENST00000497393 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
GTF2E1-205ENST00000497393 EVI5O60447 810 aa8.69□□□□□ -1.02
GTF2E1-205ENST00000497393 OSBPP22059 807 aa8.68□□□□□ -1.02
GTF2E1-205ENST00000497393 PRIM1P49642 420 aaKnown RBP8.68□□□□□ -1.02
GTF2E1-205ENST00000497393 TMEM132AQ24JP5 1023 aa8.67□□□□□ -1.02
GTF2E1-205ENST00000497393 PTCD2Q8WV60 388 aaKnown RBP8.67□□□□□ -1.02
GTF2E1-205ENST00000497393 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.67□□□□□ -1.02
GTF2E1-205ENST00000497393 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
GTF2E1-205ENST00000497393 TBC1D12O60347 775 aa8.66□□□□□ -1.02
GTF2E1-205ENST00000497393 PTGER2P43116 358 aa8.66□□□□□ -1.02
GTF2E1-205ENST00000497393 SLC34A2O95436 690 aa8.65□□□□□ -1.02
GTF2E1-205ENST00000497393 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
GTF2E1-205ENST00000497393 AK7Q96M32 723 aa8.64□□□□□ -1.03
GTF2E1-205ENST00000497393 ZNF316A6NFI3 1004 aaPredicted RBP8.63□□□□□ -1.03
GTF2E1-205ENST00000497393 POTEJP0CG39 1038 aa8.63□□□□□ -1.03
GTF2E1-205ENST00000497393 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
GTF2E1-205ENST00000497393 PCDHGA4Q9Y5G9 962 aa8.61□□□□□ -1.03
GTF2E1-205ENST00000497393 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
GTF2E1-205ENST00000497393 TRIM66O15016 1216 aa8.6□□□□□ -1.03
GTF2E1-205ENST00000497393 FECHP22830 423 aa8.6□□□□□ -1.03
GTF2E1-205ENST00000497393 CDHR5Q9HBB8 845 aa8.6□□□□□ -1.03
GTF2E1-205ENST00000497393 ANO8Q9HCE9 1232 aaPredicted RBP8.6□□□□□ -1.03
GTF2E1-205ENST00000497393 CCDC102AQ96A19 550 aa8.59□□□□□ -1.03
GTF2E1-205ENST00000497393 GTF3C3Q9Y5Q9 886 aa8.59□□□□□ -1.03
GTF2E1-205ENST00000497393 GNPATO15228 680 aa8.58□□□□□ -1.04
GTF2E1-205ENST00000497393 FCHSD2O94868 740 aa8.58□□□□□ -1.04
GTF2E1-205ENST00000497393 MAP2K5Q13163 448 aa8.58□□□□□ -1.04
GTF2E1-205ENST00000497393 PDE4DQ08499 809 aa8.57□□□□□ -1.04
GTF2E1-205ENST00000497393 HIC1Q14526 733 aa8.57□□□□□ -1.04
GTF2E1-205ENST00000497393 PHF14O94880 888 aa8.56□□□□□ -1.04
GTF2E1-205ENST00000497393 EN1Q05925 392 aaPredicted RBP8.56□□□□□ -1.04
GTF2E1-205ENST00000497393 PTGDRQ13258 359 aa8.56□□□□□ -1.04
GTF2E1-205ENST00000497393 RBM33Q96EV2 1170 aaKnown RBP8.56□□□□□ -1.04
GTF2E1-205ENST00000497393 PCDHGA10Q9Y5H3 936 aa8.56□□□□□ -1.04
GTF2E1-205ENST00000497393 KDM4FA0A1W2PPD8 638 aa8.55□□□□□ -1.04
GTF2E1-205ENST00000497393 MAP3K7O43318 606 aa8.55□□□□□ -1.04
GTF2E1-205ENST00000497393 KHSRPQ92945 711 aaKnown RBP eCLIP8.55□□□□□ -1.04
GTF2E1-205ENST00000497393 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
GTF2E1-205ENST00000497393 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
GTF2E1-205ENST00000497393 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
GTF2E1-205ENST00000497393 IRF6O14896 467 aa8.54□□□□□ -1.04
GTF2E1-205ENST00000497393 HOXB3P14651 431 aaPredicted RBP8.54□□□□□ -1.04
GTF2E1-205ENST00000497393 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
GTF2E1-205ENST00000497393 SLAIN1Q8ND83 568 aa8.53□□□□□ -1.04
GTF2E1-205ENST00000497393 EPAS1Q99814 870 aa8.53□□□□□ -1.04
GTF2E1-205ENST00000497393 NUDT7P0C024 238 aa8.52□□□□□ -1.05
GTF2E1-205ENST00000497393 TYW1BQ6NUM6 668 aa8.52□□□□□ -1.05
GTF2E1-205ENST00000497393 JPH4Q96JJ6 628 aa8.52□□□□□ -1.05
GTF2E1-205ENST00000497393 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
GTF2E1-205ENST00000497393 ARSIQ5FYB1 569 aa8.51□□□□□ -1.05
GTF2E1-205ENST00000497393 FOSBP53539 338 aa8.5□□□□□ -1.05
GTF2E1-205ENST00000497393 DOK7Q18PE1 504 aa8.5□□□□□ -1.05
GTF2E1-205ENST00000497393 PARP9Q8IXQ6 854 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms