RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 TMCO4Q5TGY1 634 aa10.8□□□□□ -0.68
SNX13-210ENST00000494402 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
SNX13-210ENST00000494402 A6NJR5 290 aa10.78□□□□□ -0.68
SNX13-210ENST00000494402 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
SNX13-210ENST00000494402 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
SNX13-210ENST00000494402 TRAK2O60296 914 aa10.77□□□□□ -0.69
SNX13-210ENST00000494402 FAM212AQ96EL1 285 aa10.77□□□□□ -0.69
SNX13-210ENST00000494402 RBM25P49756 843 aaKnown RBP10.74□□□□□ -0.69
SNX13-210ENST00000494402 PDE4DQ08499 809 aa10.74□□□□□ -0.69
SNX13-210ENST00000494402 CHADLQ6NUI6 762 aa10.74□□□□□ -0.69
SNX13-210ENST00000494402 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
SNX13-210ENST00000494402 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
SNX13-210ENST00000494402 MFAP1P55081 439 aaKnown RBP10.73□□□□□ -0.69
SNX13-210ENST00000494402 TRIM66O15016 1216 aa10.71□□□□□ -0.69
SNX13-210ENST00000494402 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
SNX13-210ENST00000494402 PUS7Q96PZ0 661 aaKnown RBP10.71□□□□□ -0.69
SNX13-210ENST00000494402 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
SNX13-210ENST00000494402 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
SNX13-210ENST00000494402 FOXD4L5Q5VV16 416 aaPredicted RBP10.67□□□□□ -0.7
SNX13-210ENST00000494402 GPIHBP1Q8IV16 184 aa10.67□□□□□ -0.7
SNX13-210ENST00000494402 FOXD4L4Q8WXT5 416 aaPredicted RBP10.67□□□□□ -0.7
SNX13-210ENST00000494402 FAM117AQ9C073 453 aa10.67□□□□□ -0.7
SNX13-210ENST00000494402 GZF1Q9H116 711 aaPredicted RBP10.67□□□□□ -0.7
SNX13-210ENST00000494402 E9PSI1 815 aa10.66□□□□□ -0.7
SNX13-210ENST00000494402 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
SNX13-210ENST00000494402 CLUAP1Q96AJ1 413 aa10.66□□□□□ -0.7
SNX13-210ENST00000494402 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
SNX13-210ENST00000494402 SERPINA10Q9UK55 444 aa10.66□□□□□ -0.7
SNX13-210ENST00000494402 CCDC97Q96F63 343 aaPredicted RBP10.65□□□□□ -0.7
SNX13-210ENST00000494402 ZNF428Q96B54 188 aa10.62□□□□□ -0.71
SNX13-210ENST00000494402 PLEKHG3A1L390 1219 aa10.59□□□□□ -0.71
SNX13-210ENST00000494402 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
SNX13-210ENST00000494402 PYGBP11216 843 aa10.58□□□□□ -0.72
SNX13-210ENST00000494402 FBXW7Q969H0 707 aa10.58□□□□□ -0.72
SNX13-210ENST00000494402 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
SNX13-210ENST00000494402 RETREG2Q8NC44 543 aa10.57□□□□□ -0.72
SNX13-210ENST00000494402 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
SNX13-210ENST00000494402 GOPCQ9HD26 462 aa10.56□□□□□ -0.72
SNX13-210ENST00000494402 ZNF777Q9ULD5 760 aaPredicted RBP10.56□□□□□ -0.72
SNX13-210ENST00000494402 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
SNX13-210ENST00000494402 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
SNX13-210ENST00000494402 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
SNX13-210ENST00000494402 PDE4CQ08493 712 aa10.51□□□□□ -0.73
SNX13-210ENST00000494402 IRF5Q13568 498 aa10.5□□□□□ -0.73
SNX13-210ENST00000494402 MCM6Q14566 821 aa10.5□□□□□ -0.73
SNX13-210ENST00000494402 USP35Q9P2H5 1018 aa10.5□□□□□ -0.73
SNX13-210ENST00000494402 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
SNX13-210ENST00000494402 ZNF467Q7Z7K2 595 aaPredicted RBP10.48□□□□□ -0.73
SNX13-210ENST00000494402 POTEMA6NI47 508 aa10.47□□□□□ -0.73
SNX13-210ENST00000494402 PCMTD1Q96MG8 357 aaPredicted RBP10.47□□□□□ -0.73
SNX13-210ENST00000494402 RSPH4AQ5TD94 716 aa10.46□□□□□ -0.73
SNX13-210ENST00000494402 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
SNX13-210ENST00000494402 MFRPQ9BY79 579 aa10.46□□□□□ -0.73
SNX13-210ENST00000494402 FNBP4Q8N3X1 1017 aaPredicted RBP10.45□□□□□ -0.74
SNX13-210ENST00000494402 AMOTL2Q9Y2J4 779 aa10.45□□□□□ -0.74
SNX13-210ENST00000494402 CLCN6P51797 869 aa10.44□□□□□ -0.74
SNX13-210ENST00000494402 MLLT3P42568 568 aaPredicted RBP10.43□□□□□ -0.74
SNX13-210ENST00000494402 PPP1R15AO75807 674 aaPredicted RBP10.42□□□□□ -0.74
SNX13-210ENST00000494402 CD44P16070 742 aaKnown RBP10.42□□□□□ -0.74
SNX13-210ENST00000494402 POTEGQ6S5H5 508 aa10.42□□□□□ -0.74
SNX13-210ENST00000494402 OTUD5Q96G74 571 aa10.42□□□□□ -0.74
SNX13-210ENST00000494402 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
SNX13-210ENST00000494402 MINK1Q8N4C8 1332 aaPredicted RBP10.41□□□□□ -0.74
SNX13-210ENST00000494402 AMHR2Q16671 573 aa10.41□□□□□ -0.74
SNX13-210ENST00000494402 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
SNX13-210ENST00000494402 PPP1R37O75864 691 aa10.4□□□□□ -0.74
SNX13-210ENST00000494402 PDE4AP27815 886 aa10.4□□□□□ -0.74
SNX13-210ENST00000494402 MFSD10Q14728 455 aa10.4□□□□□ -0.74
SNX13-210ENST00000494402 PARP9Q8IXQ6 854 aa10.4□□□□□ -0.74
SNX13-210ENST00000494402 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
SNX13-210ENST00000494402 ZRANB1Q9UGI0 708 aa10.4□□□□□ -0.74
SNX13-210ENST00000494402 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
SNX13-210ENST00000494402 KCNA1Q09470 495 aa10.39□□□□□ -0.75
SNX13-210ENST00000494402 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
SNX13-210ENST00000494402 PCDHB8Q9UN66 801 aa10.39□□□□□ -0.75
SNX13-210ENST00000494402 PCDHB13Q9Y5F0 798 aa10.39□□□□□ -0.75
SNX13-210ENST00000494402 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
SNX13-210ENST00000494402 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
SNX13-210ENST00000494402 MAP3K13O43283 966 aa10.36□□□□□ -0.75
SNX13-210ENST00000494402 CAMK2BQ13554 666 aa10.36□□□□□ -0.75
SNX13-210ENST00000494402 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
SNX13-210ENST00000494402 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
SNX13-210ENST00000494402 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
SNX13-210ENST00000494402 POM121Q96HA1 1249 aa10.35□□□□□ -0.75
SNX13-210ENST00000494402 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
SNX13-210ENST00000494402 PSEN1P49768 467 aa10.34□□□□□ -0.75
SNX13-210ENST00000494402 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
SNX13-210ENST00000494402 PCDH10Q9P2E7 1040 aa10.34□□□□□ -0.75
SNX13-210ENST00000494402 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
SNX13-210ENST00000494402 GPR37O15354 613 aa10.32□□□□□ -0.76
SNX13-210ENST00000494402 BRD1O95696 1058 aa10.32□□□□□ -0.76
SNX13-210ENST00000494402 NLRP6P59044 892 aa10.32□□□□□ -0.76
SNX13-210ENST00000494402 CCDC27Q2M243 656 aa10.32□□□□□ -0.76
SNX13-210ENST00000494402 PHF12Q96QT6 1004 aa10.31□□□□□ -0.76
SNX13-210ENST00000494402 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
SNX13-210ENST00000494402 IRF6O14896 467 aa10.3□□□□□ -0.76
SNX13-210ENST00000494402 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
SNX13-210ENST00000494402 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
SNX13-210ENST00000494402 SH3D19Q5HYK7 790 aa10.28□□□□□ -0.76
SNX13-210ENST00000494402 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms