RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ABCC1P33527 1531 aa19.61■□□□□ 0.73
SRSF4-204ENST00000489898 DENND4BO75064 1496 aaPredicted RBP19.6■□□□□ 0.73
SRSF4-204ENST00000489898 CLIP1P30622 1438 aa19.59■□□□□ 0.73
SRSF4-204ENST00000489898 ZFYVE16Q7Z3T8 1539 aa19.59■□□□□ 0.73
SRSF4-204ENST00000489898 RAPGEF3O95398 923 aa19.58■□□□□ 0.72
SRSF4-204ENST00000489898 ABCA6Q8N139 1617 aa19.58■□□□□ 0.72
SRSF4-204ENST00000489898 YEATS2Q9ULM3 1422 aa19.57■□□□□ 0.72
SRSF4-204ENST00000489898 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
SRSF4-204ENST00000489898 PLEKHD1A6NEE1 506 aa19.55■□□□□ 0.72
SRSF4-204ENST00000489898 SAMD9LQ8IVG5 1584 aa19.55■□□□□ 0.72
SRSF4-204ENST00000489898 DIP2CQ9Y2E4 1556 aa19.55■□□□□ 0.72
SRSF4-204ENST00000489898 ARHGEF12Q9NZN5 1544 aa19.54■□□□□ 0.72
SRSF4-204ENST00000489898 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
SRSF4-204ENST00000489898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.53■□□□□ 0.72
SRSF4-204ENST00000489898 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
SRSF4-204ENST00000489898 KIDINS220Q9ULH0 1771 aa19.52■□□□□ 0.72
SRSF4-204ENST00000489898 REREQ9P2R6 1566 aa19.52■□□□□ 0.71
SRSF4-204ENST00000489898 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
SRSF4-204ENST00000489898 MAGI2Q86UL8 1455 aa19.51■□□□□ 0.71
SRSF4-204ENST00000489898 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
SRSF4-204ENST00000489898 PTPRMP28827 1452 aa19.49■□□□□ 0.71
SRSF4-204ENST00000489898 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
SRSF4-204ENST00000489898 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
SRSF4-204ENST00000489898 INO80Q9ULG1 1556 aaPredicted RBP19.46■□□□□ 0.71
SRSF4-204ENST00000489898 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
SRSF4-204ENST00000489898 EHBP1L1Q8N3D4 1523 aa19.44■□□□□ 0.7
SRSF4-204ENST00000489898 SYCP2Q9BX26 1530 aa19.43■□□□□ 0.7
SRSF4-204ENST00000489898 GPATCH8Q9UKJ3 1502 aaKnown RBP19.43■□□□□ 0.7
SRSF4-204ENST00000489898 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
SRSF4-204ENST00000489898 MLH3Q9UHC1 1453 aa19.4■□□□□ 0.7
SRSF4-204ENST00000489898 PLXNC1O60486 1568 aa19.4■□□□□ 0.7
SRSF4-204ENST00000489898 C9orf84Q5VXU9 1444 aa19.39■□□□□ 0.69
SRSF4-204ENST00000489898 LMTK3Q96Q04 1460 aa19.38■□□□□ 0.69
SRSF4-204ENST00000489898 ADGBQ8N7X0 1667 aa19.36■□□□□ 0.69
SRSF4-204ENST00000489898 ATP10AO60312 1499 aa19.36■□□□□ 0.69
SRSF4-204ENST00000489898 C3P01024 1663 aa19.35■□□□□ 0.69
SRSF4-204ENST00000489898 AGLP35573 1532 aa19.35■□□□□ 0.69
SRSF4-204ENST00000489898 SUPT6HQ7KZ85 1726 aaKnown RBP19.34■□□□□ 0.69
SRSF4-204ENST00000489898 ATP1B4Q9UN42 357 aaPredicted RBP19.34■□□□□ 0.69
SRSF4-204ENST00000489898 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.68
SRSF4-204ENST00000489898 PREX1Q8TCU6 1659 aa19.33■□□□□ 0.68
SRSF4-204ENST00000489898 ATP7AQ04656 1500 aa19.31■□□□□ 0.68
SRSF4-204ENST00000489898 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
SRSF4-204ENST00000489898 MROH2AA6NES4 1674 aa19.29■□□□□ 0.68
SRSF4-204ENST00000489898 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
SRSF4-204ENST00000489898 MBD5Q9P267 1494 aa19.28■□□□□ 0.68
SRSF4-204ENST00000489898 AFAP1Q8N556 730 aa19.27■□□□□ 0.68
SRSF4-204ENST00000489898 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
SRSF4-204ENST00000489898 NCOA2Q15596 1464 aa19.25■□□□□ 0.67
SRSF4-204ENST00000489898 MAP3K1Q13233 1512 aa19.24■□□□□ 0.67
SRSF4-204ENST00000489898 STRCQ7RTU9 1775 aa19.22■□□□□ 0.67
SRSF4-204ENST00000489898 MTUS2Q5JR59 1369 aa19.21■□□□□ 0.67
SRSF4-204ENST00000489898 CAMSAP2Q08AD1 1489 aa19.21■□□□□ 0.67
SRSF4-204ENST00000489898 LRRC9Q6ZRR7 1453 aa19.21■□□□□ 0.67
SRSF4-204ENST00000489898 PLEKHH2Q8IVE3 1493 aa19.21■□□□□ 0.67
SRSF4-204ENST00000489898 ARHGEF5Q12774 1597 aa19.2■□□□□ 0.66
SRSF4-204ENST00000489898 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
SRSF4-204ENST00000489898 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
SRSF4-204ENST00000489898 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
SRSF4-204ENST00000489898 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
SRSF4-204ENST00000489898 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
SRSF4-204ENST00000489898 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
SRSF4-204ENST00000489898 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
SRSF4-204ENST00000489898 ZNF644Q9H582 1327 aaPredicted RBP19.13■□□□□ 0.65
SRSF4-204ENST00000489898 MYO3AQ8NEV4 1616 aa19.13■□□□□ 0.65
SRSF4-204ENST00000489898 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
SRSF4-204ENST00000489898 A2MP01023 1474 aa19.11■□□□□ 0.65
SRSF4-204ENST00000489898 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
SRSF4-204ENST00000489898 MROH1Q8NDA8 1641 aa19.11■□□□□ 0.65
SRSF4-204ENST00000489898 RNF17Q9BXT8 1623 aaKnown RBP19.1■□□□□ 0.65
SRSF4-204ENST00000489898 HNRNPMP52272 730 aaKnown RBP eCLIP19.08■□□□□ 0.64
SRSF4-204ENST00000489898 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.64
SRSF4-204ENST00000489898 MLECQ14165 292 aa19.07■□□□□ 0.64
SRSF4-204ENST00000489898 CFDP1Q9UEE9 299 aaPredicted RBP19.06■□□□□ 0.64
SRSF4-204ENST00000489898 EIF2AK4Q9P2K8 1649 aaKnown RBP19.05■□□□□ 0.64
SRSF4-204ENST00000489898 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
SRSF4-204ENST00000489898 ZNF777Q9ULD5 760 aaPredicted RBP19.03■□□□□ 0.64
SRSF4-204ENST00000489898 FAM135AQ9P2D6 1515 aa19.03■□□□□ 0.64
SRSF4-204ENST00000489898 MYOM3Q5VTT5 1437 aa19.02■□□□□ 0.64
SRSF4-204ENST00000489898 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
SRSF4-204ENST00000489898 KANK4Q5T7N3 995 aaPredicted RBP19.02■□□□□ 0.64
SRSF4-204ENST00000489898 DNMT1P26358 1616 aaKnown RBP19.02■□□□□ 0.64
SRSF4-204ENST00000489898 PTPN23Q9H3S7 1636 aa19.02■□□□□ 0.64
SRSF4-204ENST00000489898 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
SRSF4-204ENST00000489898 ZC3H13Q5T200 1668 aaKnown RBP19.01■□□□□ 0.63
SRSF4-204ENST00000489898 CEP152O94986 1710 aa19■□□□□ 0.63
SRSF4-204ENST00000489898 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
SRSF4-204ENST00000489898 NPATQ14207 1427 aa18.99■□□□□ 0.63
SRSF4-204ENST00000489898 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
SRSF4-204ENST00000489898 HSPA2P54652 639 aa18.98■□□□□ 0.63
SRSF4-204ENST00000489898 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
SRSF4-204ENST00000489898 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
SRSF4-204ENST00000489898 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
SRSF4-204ENST00000489898 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
SRSF4-204ENST00000489898 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
SRSF4-204ENST00000489898 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
SRSF4-204ENST00000489898 POLR1AO95602 1720 aaPredicted RBP18.94■□□□□ 0.62
SRSF4-204ENST00000489898 DHX29Q7Z478 1369 aaKnown RBP18.93■□□□□ 0.62
SRSF4-204ENST00000489898 CAMSAP1Q5T5Y3 1602 aa18.93■□□□□ 0.62
SRSF4-204ENST00000489898 PRDM15P57071 1507 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms