RNA–Protein interactions for RNA: ENST00000489779.1

ACTR3-207, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2

Gene ACTR3, Length 545 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-207ENST00000489779 HOXB3P14651 431 aaPredicted RBP11.09□□□□□ -0.63
ACTR3-207ENST00000489779 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
ACTR3-207ENST00000489779 HS6ST3Q8IZP7 471 aa11.07□□□□□ -0.64
ACTR3-207ENST00000489779 NLRP6P59044 892 aa11.05□□□□□ -0.64
ACTR3-207ENST00000489779 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
ACTR3-207ENST00000489779 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
ACTR3-207ENST00000489779 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
ACTR3-207ENST00000489779 MICALL2Q8IY33 904 aa11.02□□□□□ -0.65
ACTR3-207ENST00000489779 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
ACTR3-207ENST00000489779 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
ACTR3-207ENST00000489779 PPP1R37O75864 691 aa10.99□□□□□ -0.65
ACTR3-207ENST00000489779 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
ACTR3-207ENST00000489779 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
ACTR3-207ENST00000489779 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
ACTR3-207ENST00000489779 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
ACTR3-207ENST00000489779 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
ACTR3-207ENST00000489779 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
ACTR3-207ENST00000489779 ERBB3P21860 1342 aa10.93□□□□□ -0.66
ACTR3-207ENST00000489779 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
ACTR3-207ENST00000489779 GPR153Q6NV75 609 aa10.86□□□□□ -0.67
ACTR3-207ENST00000489779 GTPBP6O43824 516 aaPredicted RBP10.84□□□□□ -0.67
ACTR3-207ENST00000489779 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
ACTR3-207ENST00000489779 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
ACTR3-207ENST00000489779 KIF3CO14782 793 aa10.81□□□□□ -0.68
ACTR3-207ENST00000489779 RNF166Q96A37 237 aaPredicted RBP10.8□□□□□ -0.68
ACTR3-207ENST00000489779 PTGER2P43116 358 aa10.75□□□□□ -0.69
ACTR3-207ENST00000489779 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
ACTR3-207ENST00000489779 ARSIQ5FYB1 569 aa10.74□□□□□ -0.69
ACTR3-207ENST00000489779 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
ACTR3-207ENST00000489779 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
ACTR3-207ENST00000489779 ZNF316A6NFI3 1004 aaPredicted RBP10.71□□□□□ -0.69
ACTR3-207ENST00000489779 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
ACTR3-207ENST00000489779 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.74e-8■■■■□ 26.3
ACTR3-207ENST00000489779 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
ACTR3-207ENST00000489779 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
ACTR3-207ENST00000489779 DSG2Q14126 1118 aa10.66□□□□□ -0.7
ACTR3-207ENST00000489779 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
ACTR3-207ENST00000489779 FOXK1P85037 733 aa10.64□□□□□ -0.71
ACTR3-207ENST00000489779 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
ACTR3-207ENST00000489779 SLC34A2O95436 690 aa10.63□□□□□ -0.71
ACTR3-207ENST00000489779 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
ACTR3-207ENST00000489779 PLPP6Q8IY26 295 aa10.63□□□□□ -0.71
ACTR3-207ENST00000489779 PBX2P40425 430 aa10.62□□□□□ -0.71
ACTR3-207ENST00000489779 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
ACTR3-207ENST00000489779 NUDT7P0C024 238 aa10.6□□□□□ -0.71
ACTR3-207ENST00000489779 SPRYD3Q8NCJ5 442 aa10.59□□□□□ -0.71
ACTR3-207ENST00000489779 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
ACTR3-207ENST00000489779 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
ACTR3-207ENST00000489779 CFAP44Q96MT7 982 aa10.58□□□□□ -0.72
ACTR3-207ENST00000489779 PDE4AP27815 886 aa10.57□□□□□ -0.72
ACTR3-207ENST00000489779 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.57□□□□□ -0.72
ACTR3-207ENST00000489779 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
ACTR3-207ENST00000489779 LHX6Q9UPM6 363 aa10.56□□□□□ -0.72
ACTR3-207ENST00000489779 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
ACTR3-207ENST00000489779 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
ACTR3-207ENST00000489779 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
ACTR3-207ENST00000489779 MFSD10Q14728 455 aa10.52□□□□□ -0.73
ACTR3-207ENST00000489779 KDM4FA0A1W2PPD8 638 aa10.51□□□□□ -0.73
ACTR3-207ENST00000489779 PSDA5PKW4 1024 aaPredicted RBP10.5□□□□□ -0.73
ACTR3-207ENST00000489779 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
ACTR3-207ENST00000489779 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
ACTR3-207ENST00000489779 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
ACTR3-207ENST00000489779 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
ACTR3-207ENST00000489779 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
ACTR3-207ENST00000489779 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
ACTR3-207ENST00000489779 EMILIN3Q9NT22 766 aa10.45□□□□□ -0.74
ACTR3-207ENST00000489779 TK2O00142 265 aa10.41□□□□□ -0.74
ACTR3-207ENST00000489779 TBC1D12O60347 775 aa10.41□□□□□ -0.74
ACTR3-207ENST00000489779 HCSTQ9UBK5 93 aa10.41□□□□□ -0.74
ACTR3-207ENST00000489779 TSHZ2Q9NRE2 1034 aa10.4□□□□□ -0.74
ACTR3-207ENST00000489779 HRO43593 1189 aa10.38□□□□□ -0.75
ACTR3-207ENST00000489779 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
ACTR3-207ENST00000489779 PLA2G2EQ9NZK7 142 aa10.38□□□□□ -0.75
ACTR3-207ENST00000489779 EVI5O60447 810 aa10.36□□□□□ -0.75
ACTR3-207ENST00000489779 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
ACTR3-207ENST00000489779 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
ACTR3-207ENST00000489779 DMRTA1Q5VZB9 504 aa10.35□□□□□ -0.75
ACTR3-207ENST00000489779 PSEN2P49810 448 aa10.34□□□□□ -0.75
ACTR3-207ENST00000489779 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
ACTR3-207ENST00000489779 DPYSL4O14531 572 aa10.32□□□□□ -0.76
ACTR3-207ENST00000489779 ZNF454Q8N9F8 522 aa10.29□□□□□ -0.76
ACTR3-207ENST00000489779 FOSBP53539 338 aa10.28□□□□□ -0.76
ACTR3-207ENST00000489779 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
ACTR3-207ENST00000489779 E2F4Q16254 413 aa10.26□□□□□ -0.77
ACTR3-207ENST00000489779 KCNH8Q96L42 1107 aa10.26□□□□□ -0.77
ACTR3-207ENST00000489779 WDR70Q9NW82 654 aa10.26□□□□□ -0.77
ACTR3-207ENST00000489779 KCNK17Q96T54 332 aa10.25□□□□□ -0.77
ACTR3-207ENST00000489779 KCTD12Q96CX2 325 aaKnown RBP10.24□□□□□ -0.77
ACTR3-207ENST00000489779 JPH4Q96JJ6 628 aa10.24□□□□□ -0.77
ACTR3-207ENST00000489779 SLC4A5Q9BY07 1137 aa10.23□□□□□ -0.77
ACTR3-207ENST00000489779 VPS9D1Q9Y2B5 631 aa10.23□□□□□ -0.77
ACTR3-207ENST00000489779 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
ACTR3-207ENST00000489779 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
ACTR3-207ENST00000489779 ADAM33Q9BZ11 813 aa10.22□□□□□ -0.77
ACTR3-207ENST00000489779 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
ACTR3-207ENST00000489779 ZDHHC16Q969W1 377 aa10.2□□□□□ -0.78
ACTR3-207ENST00000489779 PDIA6Q15084 440 aa10.18□□□□□ -0.78
ACTR3-207ENST00000489779 DDX12PQ92771 950 aa10.18□□□□□ -0.78
ACTR3-207ENST00000489779 ARIH1Q9Y4X5 557 aaPredicted RBP10.18□□□□□ -0.78
ACTR3-207ENST00000489779 BHMG1C9JSJ3 638 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms