RNA–Protein interactions for RNA: ENST00000482305.1

RFWD2-208, Transcript of E3 ubiquitin-protein ligase RFWD2, human

TSL 2

Gene RFWD2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD2-208	ENST00000482305	ANKRD13D	Q6ZTN6	518 aa		4.49	□□□□□ -1.69
RFWD2-208	ENST00000482305	ZNF687	Q8N1G0	1237 aa		4.49	□□□□□ -1.69
RFWD2-208	ENST00000482305	IRX2	Q9BZI1	471 aa	Predicted RBP	4.48	□□□□□ -1.69
RFWD2-208	ENST00000482305	STK24	Q9Y6E0	443 aa		4.48	□□□□□ -1.69
RFWD2-208	ENST00000482305	DOK7	Q18PE1	504 aa		4.47	□□□□□ -1.69
RFWD2-208	ENST00000482305	BCL11B	Q9C0K0	894 aa	Predicted RBP	4.47	□□□□□ -1.69
RFWD2-208	ENST00000482305	STK25	O00506	426 aa		4.46	□□□□□ -1.7
RFWD2-208	ENST00000482305	NLRP6	P59044	892 aa		4.46	□□□□□ -1.7
RFWD2-208	ENST00000482305	HCST	Q9UBK5	93 aa		4.46	□□□□□ -1.7
RFWD2-208	ENST00000482305	PHF8	Q9UPP1	1060 aa		4.46	□□□□□ -1.7
RFWD2-208	ENST00000482305	MICALL2	Q8IY33	904 aa		4.45	□□□□□ -1.7
RFWD2-208	ENST00000482305	RIMBP2	O15034	1052 aa		4.44	□□□□□ -1.7
RFWD2-208	ENST00000482305	PKD2	Q13563	968 aa		4.43	□□□□□ -1.7
RFWD2-208	ENST00000482305	MS4A4A	Q96JQ5	239 aa		4.43	□□□□□ -1.7
RFWD2-208	ENST00000482305	RGL2	O15211	777 aa		4.42	□□□□□ -1.7
RFWD2-208	ENST00000482305	RGS20	O76081	388 aa		4.41	□□□□□ -1.7
RFWD2-208	ENST00000482305	LSM11	P83369	360 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
RFWD2-208	ENST00000482305	FBXO22	Q8NEZ5	403 aa		4.4	□□□□□ -1.71
RFWD2-208	ENST00000482305	MFRP	Q9BY79	579 aa		4.4	□□□□□ -1.71
RFWD2-208	ENST00000482305	TMEM92	Q6UXU6	159 aa		4.39	□□□□□ -1.71
RFWD2-208	ENST00000482305		Q6ZNB5	142 aa		4.37	□□□□□ -1.71
RFWD2-208	ENST00000482305	ZSWIM6	Q9HCJ5	1215 aa		4.37	□□□□□ -1.71
RFWD2-208	ENST00000482305	TMC2	Q8TDI7	906 aa		4.36	□□□□□ -1.71
RFWD2-208	ENST00000482305	C2orf72	A6NCS6	295 aa		4.35	□□□□□ -1.71
RFWD2-208	ENST00000482305	CHGA	P10645	457 aa	Known RBP	4.35	□□□□□ -1.71
RFWD2-208	ENST00000482305	ARSI	Q5FYB1	569 aa		4.34	□□□□□ -1.71
RFWD2-208	ENST00000482305	GPR153	Q6NV75	609 aa		4.34	□□□□□ -1.71
RFWD2-208	ENST00000482305	HS6ST3	Q8IZP7	471 aa		4.34	□□□□□ -1.71
RFWD2-208	ENST00000482305	PPP1R37	O75864	691 aa		4.32	□□□□□ -1.72
RFWD2-208	ENST00000482305	KIF3C	O14782	793 aa		4.31	□□□□□ -1.72
RFWD2-208	ENST00000482305	DCAF8L2	P0C7V8	631 aa		4.31	□□□□□ -1.72
RFWD2-208	ENST00000482305	KHSRP	Q92945	711 aa	Known RBP eCLIP	4.31	□□□□□ -1.72
RFWD2-208	ENST00000482305	RYDEN	Q9NUL5	291 aa	Known RBP	4.31	□□□□□ -1.72
RFWD2-208	ENST00000482305	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.3	□□□□□ -1.72
RFWD2-208	ENST00000482305	PBX2	P40425	430 aa		4.3	□□□□□ -1.72
RFWD2-208	ENST00000482305	SLC34A2	O95436	690 aa		4.29	□□□□□ -1.72
RFWD2-208	ENST00000482305	NUDT7	P0C024	238 aa		4.29	□□□□□ -1.72
RFWD2-208	ENST00000482305	PCDHGA4	Q9Y5G9	962 aa		4.29	□□□□□ -1.72
RFWD2-208	ENST00000482305		A0A0G2JS52	829 aa		4.28	□□□□□ -1.72
RFWD2-208	ENST00000482305	FOXK1	P85037	733 aa		4.27	□□□□□ -1.73
RFWD2-208	ENST00000482305	IFFO2	Q5TF58	517 aa		4.27	□□□□□ -1.73
RFWD2-208	ENST00000482305	PLPP6	Q8IY26	295 aa		4.27	□□□□□ -1.73
RFWD2-208	ENST00000482305	AXIN2	Q9Y2T1	843 aa		4.27	□□□□□ -1.73
RFWD2-208	ENST00000482305	TBC1D12	O60347	775 aa		4.26	□□□□□ -1.73
RFWD2-208	ENST00000482305	ADGRD1	Q6QNK2	874 aa		4.26	□□□□□ -1.73
RFWD2-208	ENST00000482305	POTEE	Q6S8J3	1075 aa		4.26	□□□□□ -1.73
RFWD2-208	ENST00000482305	KCTD12	Q96CX2	325 aa	Known RBP	4.26	□□□□□ -1.73
RFWD2-208	ENST00000482305	DNAJC5	Q9H3Z4	198 aa		4.26	□□□□□ -1.73
RFWD2-208	ENST00000482305	GPHN	Q9NQX3	736 aa	Predicted RBP	4.26	□□□□□ -1.73
RFWD2-208	ENST00000482305	LHX6	Q9UPM6	363 aa		4.26	□□□□□ -1.73
RFWD2-208	ENST00000482305	PSD	A5PKW4	1024 aa	Predicted RBP	4.25	□□□□□ -1.73
RFWD2-208	ENST00000482305	DSG2	Q14126	1118 aa		4.25	□□□□□ -1.73
RFWD2-208	ENST00000482305	NKX1-1	Q15270	411 aa	Predicted RBP	4.25	□□□□□ -1.73
RFWD2-208	ENST00000482305	PTCD2	Q8WV60	388 aa	Known RBP	4.25	□□□□□ -1.73
RFWD2-208	ENST00000482305	PDE4A	P27815	886 aa		4.22	□□□□□ -1.73
RFWD2-208	ENST00000482305	PPP4R3B	Q5MIZ7	849 aa		4.22	□□□□□ -1.73
RFWD2-208	ENST00000482305	TRAF7	Q6Q0C0	670 aa		4.22	□□□□□ -1.73
RFWD2-208	ENST00000482305	UPF1	Q92900	1129 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RFWD2-208	ENST00000482305	ARHGAP33	O14559	1287 aa		4.21	□□□□□ -1.74
RFWD2-208	ENST00000482305	LCE2B	O14633	110 aa		4.21	□□□□□ -1.74
RFWD2-208	ENST00000482305	GTPBP6	O43824	516 aa	Predicted RBP	4.21	□□□□□ -1.74
RFWD2-208	ENST00000482305	PTPN5	P54829	565 aa		4.21	□□□□□ -1.74
RFWD2-208	ENST00000482305	PPP1R15B	Q5SWA1	713 aa		4.21	□□□□□ -1.74
RFWD2-208	ENST00000482305	KCNH8	Q96L42	1107 aa		4.21	□□□□□ -1.74
RFWD2-208	ENST00000482305	CRISPLD2	Q9H0B8	497 aa		4.21	□□□□□ -1.74
RFWD2-208	ENST00000482305	LAPTM4A	Q15012	233 aa		4.2	□□□□□ -1.74
RFWD2-208	ENST00000482305	STAC3	Q96MF2	364 aa		4.2	□□□□□ -1.74
RFWD2-208	ENST00000482305	LARP6	Q9BRS8	491 aa	Known RBP	4.2	□□□□□ -1.74
RFWD2-208	ENST00000482305	KDM4F	A0A1W2PPD8	638 aa		4.19	□□□□□ -1.74
RFWD2-208	ENST00000482305	HR	O43593	1189 aa		4.19	□□□□□ -1.74
RFWD2-208	ENST00000482305	OXER1	Q8TDS5	423 aa		4.19	□□□□□ -1.74
RFWD2-208	ENST00000482305	DDX27	Q96GQ7	796 aa	Known RBP	4.19	□□□□□ -1.74
RFWD2-208	ENST00000482305	LOC100996750	A0A140TA64	210 aa		4.18	□□□□□ -1.74
RFWD2-208	ENST00000482305	TK2	O00142	265 aa		4.18	□□□□□ -1.74
RFWD2-208	ENST00000482305	PSEN2	P49810	448 aa		4.18	□□□□□ -1.74
RFWD2-208	ENST00000482305	ZNF454	Q8N9F8	522 aa		4.18	□□□□□ -1.74
RFWD2-208	ENST00000482305	KRTAP4-6	Q9BYQ5	205 aa		4.18	□□□□□ -1.74
RFWD2-208	ENST00000482305	NCKAP5L	Q9HCH0	1330 aa		4.18	□□□□□ -1.74
RFWD2-208	ENST00000482305	MAP3K9	P80192	1104 aa		4.17	□□□□□ -1.74
RFWD2-208	ENST00000482305	ZNF787	Q6DD87	383 aa		4.17	□□□□□ -1.74
RFWD2-208	ENST00000482305	ZNF775	Q96BV0	537 aa	Predicted RBP	4.17	□□□□□ -1.74
RFWD2-208	ENST00000482305	KCNK17	Q96T54	332 aa		4.17	□□□□□ -1.74
RFWD2-208	ENST00000482305	DMRTA1	Q5VZB9	504 aa		4.16	□□□□□ -1.74
RFWD2-208	ENST00000482305	EVI5	O60447	810 aa		4.15	□□□□□ -1.75
RFWD2-208	ENST00000482305	GFRA3	O60609	400 aa		4.14	□□□□□ -1.75
RFWD2-208	ENST00000482305	PTPRE	P23469	700 aa		4.14	□□□□□ -1.75
RFWD2-208	ENST00000482305	MFSD10	Q14728	455 aa		4.14	□□□□□ -1.75
RFWD2-208	ENST00000482305	BBX	Q8WY36	941 aa	Predicted RBP	4.14	□□□□□ -1.75
RFWD2-208	ENST00000482305	BCL2L12	Q9HB09	334 aa		4.14	□□□□□ -1.75
RFWD2-208	ENST00000482305	FOSB	P53539	338 aa		4.13	□□□□□ -1.75
RFWD2-208	ENST00000482305	AMER1	Q5JTC6	1135 aa	Predicted RBP	4.13	□□□□□ -1.75
RFWD2-208	ENST00000482305	ZDHHC16	Q969W1	377 aa		4.13	□□□□□ -1.75
RFWD2-208	ENST00000482305	JPH4	Q96JJ6	628 aa		4.13	□□□□□ -1.75
RFWD2-208	ENST00000482305	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.13	□□□□□ -1.75
RFWD2-208	ENST00000482305	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	4.13	□□□□□ -1.75
RFWD2-208	ENST00000482305	GOLGA8CP	A6NN73	597 aa		4.12	□□□□□ -1.75
RFWD2-208	ENST00000482305	CADPS2	Q86UW7	1296 aa		4.12	□□□□□ -1.75
RFWD2-208	ENST00000482305	VPS9D1	Q9Y2B5	631 aa		4.12	□□□□□ -1.75
RFWD2-208	ENST00000482305	SPRYD3	Q8NCJ5	442 aa		4.11	□□□□□ -1.75
RFWD2-208	ENST00000482305	ADAM33	Q9BZ11	813 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms