RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 SOX12O15370 315 aa9.85□□□□□ -0.83
SGIP1-209ENST00000480548 CAMK2BQ13554 666 aa9.85□□□□□ -0.83
SGIP1-209ENST00000480548 EFCAB3Q8N7B9 438 aa9.85□□□□□ -0.83
SGIP1-209ENST00000480548 TSPYL2Q9H2G4 693 aaPredicted RBP9.85□□□□□ -0.83
SGIP1-209ENST00000480548 PHF8Q9UPP1 1060 aa9.85□□□□□ -0.83
SGIP1-209ENST00000480548 PLEKHG3A1L390 1219 aa9.83□□□□□ -0.84
SGIP1-209ENST00000480548 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
SGIP1-209ENST00000480548 CRISPLD2Q9H0B8 497 aa9.83□□□□□ -0.84
SGIP1-209ENST00000480548 A6NJR5 290 aa9.8□□□□□ -0.84
SGIP1-209ENST00000480548 TRAK2O60296 914 aa9.8□□□□□ -0.84
SGIP1-209ENST00000480548 AKT1S1Q96B36 256 aa9.8□□□□□ -0.84
SGIP1-209ENST00000480548 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
SGIP1-209ENST00000480548 ONECUT3O60422 494 aaPredicted RBP9.78□□□□□ -0.84
SGIP1-209ENST00000480548 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
SGIP1-209ENST00000480548 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
SGIP1-209ENST00000480548 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
SGIP1-209ENST00000480548 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
SGIP1-209ENST00000480548 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
SGIP1-209ENST00000480548 GPR37O15354 613 aa9.73□□□□□ -0.85
SGIP1-209ENST00000480548 AMHR2Q16671 573 aa9.73□□□□□ -0.85
SGIP1-209ENST00000480548 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
SGIP1-209ENST00000480548 TRAIPQ9BWF2 469 aa9.73□□□□□ -0.85
SGIP1-209ENST00000480548 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
SGIP1-209ENST00000480548 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
SGIP1-209ENST00000480548 CCDC102AQ96A19 550 aa9.72□□□□□ -0.85
SGIP1-209ENST00000480548 MAP2K5Q13163 448 aa9.7□□□□□ -0.86
SGIP1-209ENST00000480548 CCDC61Q9Y6R9 512 aa9.7□□□□□ -0.86
SGIP1-209ENST00000480548 SPDYE16A6NNV3 312 aaPredicted RBP9.69□□□□□ -0.86
SGIP1-209ENST00000480548 RAD21O60216 631 aa9.69□□□□□ -0.86
SGIP1-209ENST00000480548 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
SGIP1-209ENST00000480548 MS4A4AQ96JQ5 239 aa9.69□□□□□ -0.86
SGIP1-209ENST00000480548 DPYSL4O14531 572 aa9.68□□□□□ -0.86
SGIP1-209ENST00000480548 IRF6O14896 467 aa9.68□□□□□ -0.86
SGIP1-209ENST00000480548 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
SGIP1-209ENST00000480548 MCM6Q14566 821 aa9.67□□□□□ -0.86
SGIP1-209ENST00000480548 PDIA6Q15084 440 aa9.67□□□□□ -0.86
SGIP1-209ENST00000480548 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
SGIP1-209ENST00000480548 AEBP1Q8IUX7 1158 aa9.67□□□□□ -0.86
SGIP1-209ENST00000480548 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
SGIP1-209ENST00000480548 PROSER2Q86WR7 435 aaPredicted RBP9.66□□□□□ -0.86
SGIP1-209ENST00000480548 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
SGIP1-209ENST00000480548 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
SGIP1-209ENST00000480548 TTLL12Q14166 644 aaPredicted RBP9.65□□□□□ -0.86
SGIP1-209ENST00000480548 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
SGIP1-209ENST00000480548 HAX1O00165 279 aa9.62□□□□□ -0.87
SGIP1-209ENST00000480548 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
SGIP1-209ENST00000480548 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
SGIP1-209ENST00000480548 PITPNM1O00562 1244 aa9.6□□□□□ -0.87
SGIP1-209ENST00000480548 GNPATO15228 680 aa9.6□□□□□ -0.87
SGIP1-209ENST00000480548 TMCO4Q5TGY1 634 aa9.6□□□□□ -0.87
SGIP1-209ENST00000480548 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
SGIP1-209ENST00000480548 RGS22Q8NE09 1264 aa9.6□□□□□ -0.87
SGIP1-209ENST00000480548 GPHNQ9NQX3 736 aaPredicted RBP9.6□□□□□ -0.87
SGIP1-209ENST00000480548 MAP3K13O43283 966 aa9.58□□□□□ -0.88
SGIP1-209ENST00000480548 GIGYF2Q6Y7W6 1299 aaKnown RBP9.57□□□□□ -0.88
SGIP1-209ENST00000480548 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
SGIP1-209ENST00000480548 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
SGIP1-209ENST00000480548 MTMR7Q9Y216 660 aa9.57□□□□□ -0.88
SGIP1-209ENST00000480548 GRXCR2A6NFK2 248 aa9.56□□□□□ -0.88
SGIP1-209ENST00000480548 MS4A1P11836 297 aa9.56□□□□□ -0.88
SGIP1-209ENST00000480548 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
SGIP1-209ENST00000480548 HIC1Q14526 733 aa9.56□□□□□ -0.88
SGIP1-209ENST00000480548 SH3D19Q5HYK7 790 aa9.56□□□□□ -0.88
SGIP1-209ENST00000480548 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
SGIP1-209ENST00000480548 POM121Q96HA1 1249 aa9.55□□□□□ -0.88
SGIP1-209ENST00000480548 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
SGIP1-209ENST00000480548 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
SGIP1-209ENST00000480548 KIF12Q96FN5 646 aa9.54□□□□□ -0.88
SGIP1-209ENST00000480548 FCHSD2O94868 740 aa9.53□□□□□ -0.88
SGIP1-209ENST00000480548 FECHP22830 423 aa9.53□□□□□ -0.88
SGIP1-209ENST00000480548 MFAP1P55081 439 aaKnown RBP9.53□□□□□ -0.88
SGIP1-209ENST00000480548 LHX8Q68G74 356 aa9.53□□□□□ -0.88
SGIP1-209ENST00000480548 LOC105371045A0A1W2PR82 267 aa9.52□□□□□ -0.89
SGIP1-209ENST00000480548 EVX2Q03828 476 aa9.51□□□□□ -0.89
SGIP1-209ENST00000480548 DSG2Q14126 1118 aa9.51□□□□□ -0.89
SGIP1-209ENST00000480548 RBM25P49756 843 aaKnown RBP9.5□□□□□ -0.89
SGIP1-209ENST00000480548 IRF5Q13568 498 aa9.49□□□□□ -0.89
SGIP1-209ENST00000480548 FOXD4L5Q5VV16 416 aaPredicted RBP9.49□□□□□ -0.89
SGIP1-209ENST00000480548 FOXD4L4Q8WXT5 416 aaPredicted RBP9.49□□□□□ -0.89
SGIP1-209ENST00000480548 ATP1B4Q9UN42 357 aaPredicted RBP9.49□□□□□ -0.89
SGIP1-209ENST00000480548 OSBPP22059 807 aa9.48□□□□□ -0.89
SGIP1-209ENST00000480548 SKIV2LQ15477 1246 aaKnown RBP9.48□□□□□ -0.89
SGIP1-209ENST00000480548 OXER1Q8TDS5 423 aa9.48□□□□□ -0.89
SGIP1-209ENST00000480548 IGSF3O75054 1194 aa9.47□□□□□ -0.89
SGIP1-209ENST00000480548 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
SGIP1-209ENST00000480548 REPIN1Q9BWE0 567 aaKnown RBP9.47□□□□□ -0.89
SGIP1-209ENST00000480548 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
SGIP1-209ENST00000480548 ZNF428Q96B54 188 aa9.45□□□□□ -0.9
SGIP1-209ENST00000480548 ZNF330Q9Y3S2 320 aaPredicted RBP9.45□□□□□ -0.9
SGIP1-209ENST00000480548 SPDYE5A6NIY4 337 aa9.44□□□□□ -0.9
SGIP1-209ENST00000480548 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
SGIP1-209ENST00000480548 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
SGIP1-209ENST00000480548 FOXK1P85037 733 aa9.44□□□□□ -0.9
SGIP1-209ENST00000480548 TMC2Q8TDI7 906 aa9.44□□□□□ -0.9
SGIP1-209ENST00000480548 SHROOM4Q9ULL8 1493 aa9.43□□□□□ -0.9
SGIP1-209ENST00000480548 CLCN1P35523 988 aa9.43□□□□□ -0.9
SGIP1-209ENST00000480548 PDE4CQ08493 712 aa9.43□□□□□ -0.9
SGIP1-209ENST00000480548 PROCA1Q8NCQ7 364 aaPredicted RBP9.43□□□□□ -0.9
SGIP1-209ENST00000480548 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
SGIP1-209ENST00000480548 PATL2C9JE40 543 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms