RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
SSR1-207ENST00000479485 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
SSR1-207ENST00000479485 RGL2O15211 777 aa11.64□□□□□ -0.55
SSR1-207ENST00000479485 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
SSR1-207ENST00000479485 PDAP1Q13442 181 aaKnown RBP11.59□□□□□ -0.55
SSR1-207ENST00000479485 ARSIQ5FYB1 569 aa11.59□□□□□ -0.55
SSR1-207ENST00000479485 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
SSR1-207ENST00000479485 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.562e-7■■□□□ 11.6
SSR1-207ENST00000479485 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
SSR1-207ENST00000479485 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
SSR1-207ENST00000479485 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
SSR1-207ENST00000479485 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
SSR1-207ENST00000479485 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
SSR1-207ENST00000479485 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
SSR1-207ENST00000479485 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
SSR1-207ENST00000479485 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
SSR1-207ENST00000479485 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
SSR1-207ENST00000479485 PBX2P40425 430 aa11.41□□□□□ -0.58
SSR1-207ENST00000479485 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
SSR1-207ENST00000479485 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.58
SSR1-207ENST00000479485 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
SSR1-207ENST00000479485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
SSR1-207ENST00000479485 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
SSR1-207ENST00000479485 ZFP91Q96JP5 570 aaPredicted RBP11.36□□□□□ -0.59
SSR1-207ENST00000479485 STK25O00506 426 aa11.35□□□□□ -0.59
SSR1-207ENST00000479485 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
SSR1-207ENST00000479485 NUDT7P0C024 238 aa11.33□□□□□ -0.6
SSR1-207ENST00000479485 LHX6Q9UPM6 363 aa11.32□□□□□ -0.6
SSR1-207ENST00000479485 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
SSR1-207ENST00000479485 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
SSR1-207ENST00000479485 RGS20O76081 388 aa11.3□□□□□ -0.6
SSR1-207ENST00000479485 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
SSR1-207ENST00000479485 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
SSR1-207ENST00000479485 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
SSR1-207ENST00000479485 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
SSR1-207ENST00000479485 HRO43593 1189 aa11.27□□□□□ -0.61
SSR1-207ENST00000479485 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
SSR1-207ENST00000479485 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
SSR1-207ENST00000479485 ARHGAP33O14559 1287 aa11.23□□□□□ -0.61
SSR1-207ENST00000479485 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
SSR1-207ENST00000479485 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
SSR1-207ENST00000479485 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
SSR1-207ENST00000479485 CFAP44Q96MT7 982 aa11.21□□□□□ -0.61
SSR1-207ENST00000479485 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
SSR1-207ENST00000479485 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
SSR1-207ENST00000479485 A0A0G2JS52 829 aa11.17□□□□□ -0.62
SSR1-207ENST00000479485 TK2O00142 265 aa11.17□□□□□ -0.62
SSR1-207ENST00000479485 SOX12O15370 315 aa11.17□□□□□ -0.62
SSR1-207ENST00000479485 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
SSR1-207ENST00000479485 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
SSR1-207ENST00000479485 PSEN2P49810 448 aa11.16□□□□□ -0.62
SSR1-207ENST00000479485 PTPN5P54829 565 aa11.15□□□□□ -0.62
SSR1-207ENST00000479485 HAP1P54257 671 aaPredicted RBP11.14□□□□□ -0.63
SSR1-207ENST00000479485 Q6ZNB5 142 aa11.13□□□□□ -0.63
SSR1-207ENST00000479485 KIF3CO14782 793 aa11.12□□□□□ -0.63
SSR1-207ENST00000479485 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
SSR1-207ENST00000479485 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
SSR1-207ENST00000479485 SLC34A2O95436 690 aa11.07□□□□□ -0.64
SSR1-207ENST00000479485 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
SSR1-207ENST00000479485 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
SSR1-207ENST00000479485 STAC3Q96MF2 364 aa11.05□□□□□ -0.64
SSR1-207ENST00000479485 LCE2BO14633 110 aa11.03□□□□□ -0.64
SSR1-207ENST00000479485 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
SSR1-207ENST00000479485 PSDA5PKW4 1024 aaPredicted RBP11.01□□□□□ -0.65
SSR1-207ENST00000479485 FBXO22Q8NEZ5 403 aa11.01□□□□□ -0.65
SSR1-207ENST00000479485 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
SSR1-207ENST00000479485 NLRP6P59044 892 aa11□□□□□ -0.65
SSR1-207ENST00000479485 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
SSR1-207ENST00000479485 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
SSR1-207ENST00000479485 PPP1R37O75864 691 aa10.93□□□□□ -0.66
SSR1-207ENST00000479485 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
SSR1-207ENST00000479485 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
SSR1-207ENST00000479485 PPP4R3BQ5MIZ7 849 aa10.89□□□□□ -0.67
SSR1-207ENST00000479485 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
SSR1-207ENST00000479485 TRAF7Q6Q0C0 670 aa10.87□□□□□ -0.67
SSR1-207ENST00000479485 CADPS2Q86UW7 1296 aa10.85□□□□□ -0.67
SSR1-207ENST00000479485 BHMG1C9JSJ3 638 aaPredicted RBP10.84□□□□□ -0.67
SSR1-207ENST00000479485 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
SSR1-207ENST00000479485 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
SSR1-207ENST00000479485 WNT2BQ93097 391 aa10.83□□□□□ -0.68
SSR1-207ENST00000479485 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
SSR1-207ENST00000479485 GOLGA8CPA6NN73 597 aa10.78□□□□□ -0.68
SSR1-207ENST00000479485 LAPTM4AQ15012 233 aa10.77□□□□□ -0.69
SSR1-207ENST00000479485 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
SSR1-207ENST00000479485 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
SSR1-207ENST00000479485 GFRA3O60609 400 aa10.76□□□□□ -0.69
SSR1-207ENST00000479485 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
SSR1-207ENST00000479485 NCKAP5LQ9HCH0 1330 aa10.72□□□□□ -0.69
SSR1-207ENST00000479485 ZNF775Q96BV0 537 aaPredicted RBP10.71□□□□□ -0.69
SSR1-207ENST00000479485 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
SSR1-207ENST00000479485 CRISPLD2Q9H0B8 497 aa10.69□□□□□ -0.7
SSR1-207ENST00000479485 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
SSR1-207ENST00000479485 WDR70Q9NW82 654 aa10.68□□□□□ -0.7
SSR1-207ENST00000479485 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
SSR1-207ENST00000479485 PDE4AP27815 886 aa10.66□□□□□ -0.7
SSR1-207ENST00000479485 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
SSR1-207ENST00000479485 PLPP6Q8IY26 295 aa10.65□□□□□ -0.7
SSR1-207ENST00000479485 MFSD10Q14728 455 aa10.64□□□□□ -0.71
SSR1-207ENST00000479485 ZNF454Q8N9F8 522 aa10.64□□□□□ -0.71
SSR1-207ENST00000479485 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms