RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 PYGBP11216 843 aa9.2□□□□□ -0.94
NPHP3-207ENST00000476742 ARSIQ5FYB1 569 aa9.18□□□□□ -0.94
NPHP3-207ENST00000476742 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
NPHP3-207ENST00000476742 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
NPHP3-207ENST00000476742 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
NPHP3-207ENST00000476742 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
NPHP3-207ENST00000476742 LAPTM4AQ15012 233 aa9.13□□□□□ -0.95
NPHP3-207ENST00000476742 KCTD12Q96CX2 325 aaKnown RBP9.13□□□□□ -0.95
NPHP3-207ENST00000476742 ZNF467Q7Z7K2 595 aaPredicted RBP9.1□□□□□ -0.95
NPHP3-207ENST00000476742 HRO43593 1189 aa9.09□□□□□ -0.95
NPHP3-207ENST00000476742 TMEM92Q6UXU6 159 aa9.08□□□□□ -0.96
NPHP3-207ENST00000476742 AMER1Q5JTC6 1135 aaPredicted RBP9.07□□□□□ -0.96
NPHP3-207ENST00000476742 KHSRPQ92945 711 aaKnown RBP eCLIP9.07□□□□□ -0.96
NPHP3-207ENST00000476742 TK2O00142 265 aa9.06□□□□□ -0.96
NPHP3-207ENST00000476742 ZNF775Q96BV0 537 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-207ENST00000476742 PSEN1P49768 467 aa9.05□□□□□ -0.96
NPHP3-207ENST00000476742 GSE1Q14687 1217 aa9.03□□□□□ -0.96
NPHP3-207ENST00000476742 CIZ1Q9ULV3 898 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-207ENST00000476742 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
NPHP3-207ENST00000476742 PTPN5P54829 565 aa9□□□□□ -0.97
NPHP3-207ENST00000476742 ZNF787Q6DD87 383 aa9□□□□□ -0.97
NPHP3-207ENST00000476742 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
NPHP3-207ENST00000476742 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
NPHP3-207ENST00000476742 CABP2Q9NPB3 220 aa8.93□□□□□ -0.98
NPHP3-207ENST00000476742 LHX6Q9UPM6 363 aa8.93□□□□□ -0.98
NPHP3-207ENST00000476742 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
NPHP3-207ENST00000476742 STAC3Q96MF2 364 aa8.92□□□□□ -0.98
NPHP3-207ENST00000476742 GFRA3O60609 400 aa8.91□□□□□ -0.98
NPHP3-207ENST00000476742 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-207ENST00000476742 PKD2Q13563 968 aa8.91□□□□□ -0.98
NPHP3-207ENST00000476742 NUDT7P0C024 238 aa8.9□□□□□ -0.98
NPHP3-207ENST00000476742 PDAP1Q13442 181 aaKnown RBP8.88□□□□□ -0.99
NPHP3-207ENST00000476742 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
NPHP3-207ENST00000476742 CHRM1P11229 460 aaPredicted RBP8.87□□□□□ -0.99
NPHP3-207ENST00000476742 THSD4Q6ZMP0 1018 aa8.84□□□□□ -0.99
NPHP3-207ENST00000476742 NRG2O14511 850 aaPredicted RBP8.82□□□□□ -1
NPHP3-207ENST00000476742 PSDA5PKW4 1024 aaPredicted RBP8.81□□□□□ -1
NPHP3-207ENST00000476742 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
NPHP3-207ENST00000476742 PSEN2P49810 448 aa8.8□□□□□ -1
NPHP3-207ENST00000476742 TAOK2Q9UL54 1235 aa8.8□□□□□ -1
NPHP3-207ENST00000476742 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
NPHP3-207ENST00000476742 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
NPHP3-207ENST00000476742 RGL2O15211 777 aa8.77□□□□□ -1.01
NPHP3-207ENST00000476742 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
NPHP3-207ENST00000476742 VGFO15240 615 aaPredicted RBP8.73□□□□□ -1.01
NPHP3-207ENST00000476742 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
NPHP3-207ENST00000476742 STK17AQ9UEE5 414 aa8.73□□□□□ -1.01
NPHP3-207ENST00000476742 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
NPHP3-207ENST00000476742 SLC34A2O95436 690 aa8.69□□□□□ -1.02
NPHP3-207ENST00000476742 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
NPHP3-207ENST00000476742 VPS9D1Q9Y2B5 631 aa8.69□□□□□ -1.02
NPHP3-207ENST00000476742 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
NPHP3-207ENST00000476742 WNT2BQ93097 391 aa8.66□□□□□ -1.02
NPHP3-207ENST00000476742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-207ENST00000476742 STK25O00506 426 aa8.65□□□□□ -1.02
NPHP3-207ENST00000476742 CHGAP10645 457 aaKnown RBP8.65□□□□□ -1.02
NPHP3-207ENST00000476742 ZFP91Q96JP5 570 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-207ENST00000476742 SUZ12Q15022 739 aaKnown RBP8.62□□□□□ -1.03
NPHP3-207ENST00000476742 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-207ENST00000476742 STK24Q9Y6E0 443 aa8.62□□□□□ -1.03
NPHP3-207ENST00000476742 GOLGA8CPA6NN73 597 aa8.61□□□□□ -1.03
NPHP3-207ENST00000476742 BHMG1C9JSJ3 638 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-207ENST00000476742 HS6ST3Q8IZP7 471 aa8.61□□□□□ -1.03
NPHP3-207ENST00000476742 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
NPHP3-207ENST00000476742 KCNH8Q96L42 1107 aa8.59□□□□□ -1.03
NPHP3-207ENST00000476742 SLC4A5Q9BY07 1137 aa8.59□□□□□ -1.03
NPHP3-207ENST00000476742 KIF3CO14782 793 aa8.58□□□□□ -1.04
NPHP3-207ENST00000476742 MS4A4AQ96JQ5 239 aa8.58□□□□□ -1.04
NPHP3-207ENST00000476742 KCNC4Q03721 635 aa8.57□□□□□ -1.04
NPHP3-207ENST00000476742 PPP4R3BQ5MIZ7 849 aa8.57□□□□□ -1.04
NPHP3-207ENST00000476742 KCNK17Q96T54 332 aa8.57□□□□□ -1.04
NPHP3-207ENST00000476742 BBXQ8WY36 941 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-207ENST00000476742 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-207ENST00000476742 PRKD2Q9BZL6 878 aa8.53□□□□□ -1.04
NPHP3-207ENST00000476742 SOX12O15370 315 aa8.52□□□□□ -1.05
NPHP3-207ENST00000476742 MRPL50Q8N5N7 158 aaKnown RBP8.52□□□□□ -1.05
NPHP3-207ENST00000476742 DNAJC5Q9H3Z4 198 aa8.52□□□□□ -1.05
NPHP3-207ENST00000476742 C2orf72A6NCS6 295 aa8.51□□□□□ -1.05
NPHP3-207ENST00000476742 INSM1Q01101 510 aaPredicted RBP8.5□□□□□ -1.05
NPHP3-207ENST00000476742 RYDENQ9NUL5 291 aaKnown RBP8.5□□□□□ -1.05
NPHP3-207ENST00000476742 POTECB2RU33 542 aa8.49□□□□□ -1.05
NPHP3-207ENST00000476742 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
NPHP3-207ENST00000476742 V9GY48 417 aaPredicted RBP8.49□□□□□ -1.05
NPHP3-207ENST00000476742 NLRP6P59044 892 aa8.47□□□□□ -1.05
NPHP3-207ENST00000476742 NYAP1Q6ZVC0 841 aa8.47□□□□□ -1.05
NPHP3-207ENST00000476742 WIPF1O43516 503 aa8.46□□□□□ -1.06
NPHP3-207ENST00000476742 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-207ENST00000476742 SPRYD3Q8NCJ5 442 aa8.45□□□□□ -1.06
NPHP3-207ENST00000476742 PAXIP1Q6ZW49 1069 aaPredicted RBP8.43□□□□□ -1.06
NPHP3-207ENST00000476742 CFAP44Q96MT7 982 aa8.43□□□□□ -1.06
NPHP3-207ENST00000476742 MFRPQ9BY79 579 aa8.43□□□□□ -1.06
NPHP3-207ENST00000476742 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
NPHP3-207ENST00000476742 WFS1O76024 890 aa8.41□□□□□ -1.06
NPHP3-207ENST00000476742 NBPF3Q9H094 633 aa8.41□□□□□ -1.06
NPHP3-207ENST00000476742 GTPBP6O43824 516 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-207ENST00000476742 PLCB2Q00722 1185 aa8.39□□□□□ -1.07
NPHP3-207ENST00000476742 FBXO22Q8NEZ5 403 aa8.39□□□□□ -1.07
NPHP3-207ENST00000476742 ANKK1Q8NFD2 765 aa8.39□□□□□ -1.07
NPHP3-207ENST00000476742 MYT1Q01538 1121 aa8.38□□□□□ -1.07
NPHP3-207ENST00000476742 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms