RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 MFSD10Q14728 455 aa8.93□□□□□ -0.98
SRGAP3-205ENST00000475560 RBM26Q5T8P6 1007 aaKnown RBP8.93□□□□□ -0.98
SRGAP3-205ENST00000475560 C1orf115Q9H7X2 142 aa8.93□□□□□ -0.98
SRGAP3-205ENST00000475560 PDE4DQ08499 809 aa8.92□□□□□ -0.98
SRGAP3-205ENST00000475560 EFCAB3Q8N7B9 438 aa8.92□□□□□ -0.98
SRGAP3-205ENST00000475560 GPIHBP1Q8IV16 184 aa8.91□□□□□ -0.98
SRGAP3-205ENST00000475560 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
SRGAP3-205ENST00000475560 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
SRGAP3-205ENST00000475560 MKRN3Q13064 507 aaKnown RBP8.9□□□□□ -0.98
SRGAP3-205ENST00000475560 ZRANB1Q9UGI0 708 aa8.9□□□□□ -0.98
SRGAP3-205ENST00000475560 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
SRGAP3-205ENST00000475560 MLLT3P42568 568 aaPredicted RBP8.87□□□□□ -0.99
SRGAP3-205ENST00000475560 DDX27Q96GQ7 796 aaKnown RBP8.87□□□□□ -0.99
SRGAP3-205ENST00000475560 APBB1O00213 710 aa8.86□□□□□ -0.99
SRGAP3-205ENST00000475560 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-205ENST00000475560 CRISPLD2Q9H0B8 497 aa8.86□□□□□ -0.99
SRGAP3-205ENST00000475560 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-205ENST00000475560 ARID3CA6NKF2 412 aa8.85□□□□□ -0.99
SRGAP3-205ENST00000475560 FAM117AQ9C073 453 aa8.85□□□□□ -0.99
SRGAP3-205ENST00000475560 CABP2Q9NPB3 220 aa8.85□□□□□ -0.99
SRGAP3-205ENST00000475560 PDIA4P13667 645 aaKnown RBP8.82□□□□□ -1
SRGAP3-205ENST00000475560 FLIIQ13045 1269 aa8.82□□□□□ -1
SRGAP3-205ENST00000475560 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
SRGAP3-205ENST00000475560 DCBLD2Q96PD2 775 aa8.81□□□□□ -1
SRGAP3-205ENST00000475560 ZBTB7CA1YPR0 619 aa8.79□□□□□ -1
SRGAP3-205ENST00000475560 IFNL1Q8IU54 200 aa8.79□□□□□ -1
SRGAP3-205ENST00000475560 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
SRGAP3-205ENST00000475560 GALR2O43603 387 aaPredicted RBP8.78□□□□□ -1
SRGAP3-205ENST00000475560 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
SRGAP3-205ENST00000475560 PHF12Q96QT6 1004 aa8.78□□□□□ -1
SRGAP3-205ENST00000475560 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
SRGAP3-205ENST00000475560 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1.01
SRGAP3-205ENST00000475560 MINK1Q8N4C8 1332 aaPredicted RBP8.75□□□□□ -1.01
SRGAP3-205ENST00000475560 A6NJR5 290 aa8.74□□□□□ -1.01
SRGAP3-205ENST00000475560 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
SRGAP3-205ENST00000475560 GPR37O15354 613 aa8.73□□□□□ -1.01
SRGAP3-205ENST00000475560 ONECUT3O60422 494 aaPredicted RBP8.73□□□□□ -1.01
SRGAP3-205ENST00000475560 NECTIN2Q92692 538 aa8.73□□□□□ -1.01
SRGAP3-205ENST00000475560 MAP3K13O43283 966 aa8.72□□□□□ -1.01
SRGAP3-205ENST00000475560 TRAK2O60296 914 aa8.72□□□□□ -1.01
SRGAP3-205ENST00000475560 GOPCQ9HD26 462 aa8.71□□□□□ -1.02
SRGAP3-205ENST00000475560 DPYSL4O14531 572 aa8.7□□□□□ -1.02
SRGAP3-205ENST00000475560 IRF6O14896 467 aa8.7□□□□□ -1.02
SRGAP3-205ENST00000475560 PPP1R15BQ5SWA1 713 aa8.7□□□□□ -1.02
SRGAP3-205ENST00000475560 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
SRGAP3-205ENST00000475560 PDIA6Q15084 440 aa8.69□□□□□ -1.02
SRGAP3-205ENST00000475560 AMHR2Q16671 573 aa8.69□□□□□ -1.02
SRGAP3-205ENST00000475560 CCDC82Q8N4S0 544 aa8.69□□□□□ -1.02
SRGAP3-205ENST00000475560 GPHNQ9NQX3 736 aaPredicted RBP8.69□□□□□ -1.02
SRGAP3-205ENST00000475560 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
SRGAP3-205ENST00000475560 PARP9Q8IXQ6 854 aa8.68□□□□□ -1.02
SRGAP3-205ENST00000475560 CCDC102AQ96A19 550 aa8.68□□□□□ -1.02
SRGAP3-205ENST00000475560 CLUAP1Q96AJ1 413 aa8.68□□□□□ -1.02
SRGAP3-205ENST00000475560 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
SRGAP3-205ENST00000475560 EMILIN3Q9NT22 766 aa8.68□□□□□ -1.02
SRGAP3-205ENST00000475560 ASTLQ6HA08 431 aaPredicted RBP8.64□□□□□ -1.03
SRGAP3-205ENST00000475560 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
SRGAP3-205ENST00000475560 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
SRGAP3-205ENST00000475560 GNPATO15228 680 aa8.62□□□□□ -1.03
SRGAP3-205ENST00000475560 TRAIPQ9BWF2 469 aa8.62□□□□□ -1.03
SRGAP3-205ENST00000475560 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
SRGAP3-205ENST00000475560 PELP1Q8IZL8 1130 aaKnown RBP8.61□□□□□ -1.03
SRGAP3-205ENST00000475560 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
SRGAP3-205ENST00000475560 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
SRGAP3-205ENST00000475560 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
SRGAP3-205ENST00000475560 ZNF777Q9ULD5 760 aaPredicted RBP8.6□□□□□ -1.03
SRGAP3-205ENST00000475560 GRXCR2A6NFK2 248 aa8.59□□□□□ -1.03
SRGAP3-205ENST00000475560 DSG2Q14126 1118 aa8.59□□□□□ -1.03
SRGAP3-205ENST00000475560 KCTD17Q8N5Z5 321 aa8.59□□□□□ -1.03
SRGAP3-205ENST00000475560 FECHP22830 423 aa8.57□□□□□ -1.04
SRGAP3-205ENST00000475560 TTLL12Q14166 644 aaPredicted RBP8.57□□□□□ -1.04
SRGAP3-205ENST00000475560 HIC1Q14526 733 aa8.57□□□□□ -1.04
SRGAP3-205ENST00000475560 MCM6Q14566 821 aa8.57□□□□□ -1.04
SRGAP3-205ENST00000475560 SLC39A7Q92504 469 aa8.57□□□□□ -1.04
SRGAP3-205ENST00000475560 SERPINA10Q9UK55 444 aa8.57□□□□□ -1.04
SRGAP3-205ENST00000475560 FCHSD2O94868 740 aa8.56□□□□□ -1.04
SRGAP3-205ENST00000475560 C7P10643 843 aa8.56□□□□□ -1.04
SRGAP3-205ENST00000475560 MS4A1P11836 297 aa8.56□□□□□ -1.04
SRGAP3-205ENST00000475560 OSBPP22059 807 aa8.55□□□□□ -1.04
SRGAP3-205ENST00000475560 GIGYF2Q6Y7W6 1299 aaKnown RBP8.55□□□□□ -1.04
SRGAP3-205ENST00000475560 PROSER2Q86WR7 435 aaPredicted RBP8.55□□□□□ -1.04
SRGAP3-205ENST00000475560 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
SRGAP3-205ENST00000475560 TMEM106CQ9BVX2 250 aa8.55□□□□□ -1.04
SRGAP3-205ENST00000475560 TIE1P35590 1138 aa8.54□□□□□ -1.04
SRGAP3-205ENST00000475560 FOXK1P85037 733 aa8.54□□□□□ -1.04
SRGAP3-205ENST00000475560 SH3D19Q5HYK7 790 aa8.54□□□□□ -1.04
SRGAP3-205ENST00000475560 METRNQ9UJH8 293 aa8.54□□□□□ -1.04
SRGAP3-205ENST00000475560 ATN1P54259 1190 aaPredicted RBP8.53□□□□□ -1.04
SRGAP3-205ENST00000475560 CCDC97Q96F63 343 aaPredicted RBP8.53□□□□□ -1.04
SRGAP3-205ENST00000475560 BMP2KQ9NSY1 1161 aaPredicted RBP8.53□□□□□ -1.04
SRGAP3-205ENST00000475560 AEBP1Q8IUX7 1158 aa8.52□□□□□ -1.05
SRGAP3-205ENST00000475560 TRPC6Q9Y210 931 aa8.52□□□□□ -1.05
SRGAP3-205ENST00000475560 RAD21O60216 631 aa8.51□□□□□ -1.05
SRGAP3-205ENST00000475560 MAP3K9P80192 1104 aa8.51□□□□□ -1.05
SRGAP3-205ENST00000475560 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
SRGAP3-205ENST00000475560 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-205ENST00000475560 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
SRGAP3-205ENST00000475560 TMC2Q8TDI7 906 aa8.5□□□□□ -1.05
SRGAP3-205ENST00000475560 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
SRGAP3-205ENST00000475560 POM121Q96HA1 1249 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms