RNA–Protein interactions for RNA: ENST00000474082.1

FAM3C-204, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-204ENST00000474082 SEMA3EO15041 775 aa13.79□□□□□ -0.2
FAM3C-204ENST00000474082 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
FAM3C-204ENST00000474082 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
FAM3C-204ENST00000474082 TMEM121BQ9BXQ6 578 aaPredicted RBP13.78□□□□□ -0.2
FAM3C-204ENST00000474082 TESPA1A2RU30 521 aaPredicted RBP13.76□□□□□ -0.21
FAM3C-204ENST00000474082 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
FAM3C-204ENST00000474082 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
FAM3C-204ENST00000474082 PLCG2P16885 1265 aa13.74□□□□□ -0.21
FAM3C-204ENST00000474082 DSG2Q14126 1118 aa13.73□□□□□ -0.21
FAM3C-204ENST00000474082 TMC2Q8TDI7 906 aa13.71□□□□□ -0.21
FAM3C-204ENST00000474082 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
FAM3C-204ENST00000474082 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
FAM3C-204ENST00000474082 FOXK1P85037 733 aa13.7□□□□□ -0.22
FAM3C-204ENST00000474082 COLQQ9Y215 455 aaPredicted RBP13.69□□□□□ -0.22
FAM3C-204ENST00000474082 G3V3G9 751 aa13.67□□□□□ -0.22
FAM3C-204ENST00000474082 KIF3CO14782 793 aa13.67□□□□□ -0.22
FAM3C-204ENST00000474082 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
FAM3C-204ENST00000474082 C2orf72A6NCS6 295 aa13.66□□□□□ -0.22
FAM3C-204ENST00000474082 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
FAM3C-204ENST00000474082 SEC24BO95487 1268 aa13.65□□□□□ -0.22
FAM3C-204ENST00000474082 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
FAM3C-204ENST00000474082 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
FAM3C-204ENST00000474082 PLPP6Q8IY26 295 aa13.63□□□□□ -0.23
FAM3C-204ENST00000474082 DPYSL4O14531 572 aa13.62□□□□□ -0.23
FAM3C-204ENST00000474082 SMYD5Q6GMV2 418 aa13.61□□□□□ -0.23
FAM3C-204ENST00000474082 TMEM92Q6UXU6 159 aa13.61□□□□□ -0.23
FAM3C-204ENST00000474082 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
FAM3C-204ENST00000474082 ZC3H15Q8WU90 426 aaKnown RBP13.6□□□□□ -0.23
FAM3C-204ENST00000474082 C7P10643 843 aa13.59□□□□□ -0.23
FAM3C-204ENST00000474082 MLLT3P42568 568 aaPredicted RBP13.57□□□□□ -0.24
FAM3C-204ENST00000474082 PDIA6Q15084 440 aa13.57□□□□□ -0.24
FAM3C-204ENST00000474082 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
FAM3C-204ENST00000474082 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
FAM3C-204ENST00000474082 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
FAM3C-204ENST00000474082 RBM26Q5T8P6 1007 aaKnown RBP13.5□□□□□ -0.25
FAM3C-204ENST00000474082 ZMYND10O75800 440 aa13.47□□□□□ -0.25
FAM3C-204ENST00000474082 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
FAM3C-204ENST00000474082 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
FAM3C-204ENST00000474082 OXER1Q8TDS5 423 aa13.45□□□□□ -0.26
FAM3C-204ENST00000474082 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
FAM3C-204ENST00000474082 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
FAM3C-204ENST00000474082 GPIHBP1Q8IV16 184 aa13.42□□□□□ -0.26
FAM3C-204ENST00000474082 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
FAM3C-204ENST00000474082 GRXCR2A6NFK2 248 aa13.37□□□□□ -0.27
FAM3C-204ENST00000474082 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
FAM3C-204ENST00000474082 PTGER2P43116 358 aa13.35□□□□□ -0.27
FAM3C-204ENST00000474082 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
FAM3C-204ENST00000474082 TBC1D12O60347 775 aa13.34□□□□□ -0.27
FAM3C-204ENST00000474082 EVI5O60447 810 aa13.33□□□□□ -0.28
FAM3C-204ENST00000474082 SLC34A2O95436 690 aa13.33□□□□□ -0.28
FAM3C-204ENST00000474082 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
FAM3C-204ENST00000474082 GPR37O15354 613 aa13.32□□□□□ -0.28
FAM3C-204ENST00000474082 OSBPP22059 807 aa13.32□□□□□ -0.28
FAM3C-204ENST00000474082 DDX12PQ92771 950 aa13.31□□□□□ -0.28
FAM3C-204ENST00000474082 TMEM132AQ24JP5 1023 aa13.28□□□□□ -0.28
FAM3C-204ENST00000474082 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
FAM3C-204ENST00000474082 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
FAM3C-204ENST00000474082 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
FAM3C-204ENST00000474082 AK7Q96M32 723 aa13.25□□□□□ -0.29
FAM3C-204ENST00000474082 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
FAM3C-204ENST00000474082 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
FAM3C-204ENST00000474082 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
FAM3C-204ENST00000474082 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
FAM3C-204ENST00000474082 PCDHGA4Q9Y5G9 962 aa13.21□□□□□ -0.29
FAM3C-204ENST00000474082 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
FAM3C-204ENST00000474082 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
FAM3C-204ENST00000474082 TRIM66O15016 1216 aa13.16□□□□□ -0.3
FAM3C-204ENST00000474082 FCHSD2O94868 740 aa13.15□□□□□ -0.3
FAM3C-204ENST00000474082 PHF14O94880 888 aa13.15□□□□□ -0.3
FAM3C-204ENST00000474082 GNPATO15228 680 aa13.14□□□□□ -0.31
FAM3C-204ENST00000474082 HIC1Q14526 733 aa13.14□□□□□ -0.31
FAM3C-204ENST00000474082 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
FAM3C-204ENST00000474082 FECHP22830 423 aa13.13□□□□□ -0.31
FAM3C-204ENST00000474082 EN1Q05925 392 aaPredicted RBP13.13□□□□□ -0.31
FAM3C-204ENST00000474082 MAP2K5Q13163 448 aa13.13□□□□□ -0.31
FAM3C-204ENST00000474082 PTGDRQ13258 359 aa13.13□□□□□ -0.31
FAM3C-204ENST00000474082 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
FAM3C-204ENST00000474082 EPAS1Q99814 870 aa13.12□□□□□ -0.31
FAM3C-204ENST00000474082 PCDHGA10Q9Y5H3 936 aa13.12□□□□□ -0.31
FAM3C-204ENST00000474082 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
FAM3C-204ENST00000474082 IRF6O14896 467 aa13.1□□□□□ -0.31
FAM3C-204ENST00000474082 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
FAM3C-204ENST00000474082 PDE4DQ08499 809 aa13.1□□□□□ -0.31
FAM3C-204ENST00000474082 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
FAM3C-204ENST00000474082 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
FAM3C-204ENST00000474082 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
FAM3C-204ENST00000474082 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
FAM3C-204ENST00000474082 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
FAM3C-204ENST00000474082 NPDC1Q9NQX5 325 aaPredicted RBP13.07□□□□□ -0.32
FAM3C-204ENST00000474082 MAP3K7O43318 606 aa13.06□□□□□ -0.32
FAM3C-204ENST00000474082 DOK7Q18PE1 504 aa13.06□□□□□ -0.32
FAM3C-204ENST00000474082 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
FAM3C-204ENST00000474082 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.324e-7■■■■□ 22.3
FAM3C-204ENST00000474082 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
FAM3C-204ENST00000474082 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
FAM3C-204ENST00000474082 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
FAM3C-204ENST00000474082 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
FAM3C-204ENST00000474082 NUDT7P0C024 238 aa13.03□□□□□ -0.32
FAM3C-204ENST00000474082 FOSBP53539 338 aa13.03□□□□□ -0.32
FAM3C-204ENST00000474082 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms