RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 GPR153Q6NV75 609 aa14.34□□□□□ -0.11
RFXAP-202ENST00000472888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.33□□□□□ -0.12
RFXAP-202ENST00000472888 RIMBP2O15034 1052 aa14.33□□□□□ -0.12
RFXAP-202ENST00000472888 RGL2O15211 777 aa14.33□□□□□ -0.12
RFXAP-202ENST00000472888 ZFP91Q96JP5 570 aaPredicted RBP14.33□□□□□ -0.12
RFXAP-202ENST00000472888 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
RFXAP-202ENST00000472888 ZSWIM6Q9HCJ5 1215 aa14.32□□□□□ -0.12
RFXAP-202ENST00000472888 ZNF687Q8N1G0 1237 aa14.28□□□□□ -0.12
RFXAP-202ENST00000472888 RNF166Q96A37 237 aaPredicted RBP14.27□□□□□ -0.13
RFXAP-202ENST00000472888 STK25O00506 426 aa14.22□□□□□ -0.13
RFXAP-202ENST00000472888 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
RFXAP-202ENST00000472888 FBXO22Q8NEZ5 403 aa14.21□□□□□ -0.13
RFXAP-202ENST00000472888 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
RFXAP-202ENST00000472888 ARSIQ5FYB1 569 aa14.2□□□□□ -0.14
RFXAP-202ENST00000472888 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
RFXAP-202ENST00000472888 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
RFXAP-202ENST00000472888 STK24Q9Y6E0 443 aa14.19□□□□□ -0.14
RFXAP-202ENST00000472888 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■■ 31.9
RFXAP-202ENST00000472888 NLRP6P59044 892 aa14.12□□□□□ -0.15
RFXAP-202ENST00000472888 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
RFXAP-202ENST00000472888 KIF3CO14782 793 aa14.11□□□□□ -0.15
RFXAP-202ENST00000472888 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
RFXAP-202ENST00000472888 MFRPQ9BY79 579 aa14.11□□□□□ -0.15
RFXAP-202ENST00000472888 HS6ST3Q8IZP7 471 aa14.08□□□□□ -0.16
RFXAP-202ENST00000472888 PTGER2P43116 358 aa14.06□□□□□ -0.16
RFXAP-202ENST00000472888 ANKRD13DQ6ZTN6 518 aa14.04□□□□□ -0.16
RFXAP-202ENST00000472888 C2orf72A6NCS6 295 aa14.03□□□□□ -0.16
RFXAP-202ENST00000472888 LSM11P83369 360 aaKnown RBP eCLIP14.03□□□□□ -0.16
RFXAP-202ENST00000472888 POTEEQ6S8J3 1075 aa14.02□□□□□ -0.17
RFXAP-202ENST00000472888 NUDT7P0C024 238 aa13.98□□□□□ -0.17
RFXAP-202ENST00000472888 SLC34A2O95436 690 aa13.94□□□□□ -0.18
RFXAP-202ENST00000472888 RYDENQ9NUL5 291 aaKnown RBP13.94□□□□□ -0.18
RFXAP-202ENST00000472888 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
RFXAP-202ENST00000472888 PCDHGA4Q9Y5G9 962 aa13.93□□□□□ -0.18
RFXAP-202ENST00000472888 DNAJC5Q9H3Z4 198 aa13.92□□□□□ -0.18
RFXAP-202ENST00000472888 PBX2P40425 430 aa13.91□□□□□ -0.18
RFXAP-202ENST00000472888 AXIN2Q9Y2T1 843 aa13.91□□□□□ -0.18
RFXAP-202ENST00000472888 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
RFXAP-202ENST00000472888 PPP1R37O75864 691 aa13.85□□□□□ -0.19
RFXAP-202ENST00000472888 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
RFXAP-202ENST00000472888 TMC2Q8TDI7 906 aa13.81□□□□□ -0.2
RFXAP-202ENST00000472888 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
RFXAP-202ENST00000472888 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
RFXAP-202ENST00000472888 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
RFXAP-202ENST00000472888 ARHGAP33O14559 1287 aa13.75□□□□□ -0.21
RFXAP-202ENST00000472888 PTCD2Q8WV60 388 aaKnown RBP13.73□□□□□ -0.21
RFXAP-202ENST00000472888 PLA2G2EQ9NZK7 142 aa13.72□□□□□ -0.21
RFXAP-202ENST00000472888 HRO43593 1189 aa13.71□□□□□ -0.21
RFXAP-202ENST00000472888 DMRTA1Q5VZB9 504 aa13.71□□□□□ -0.21
RFXAP-202ENST00000472888 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
RFXAP-202ENST00000472888 PSDA5PKW4 1024 aaPredicted RBP13.69□□□□□ -0.22
RFXAP-202ENST00000472888 GTPBP6O43824 516 aaPredicted RBP13.69□□□□□ -0.22
RFXAP-202ENST00000472888 PSEN2P49810 448 aa13.68□□□□□ -0.22
RFXAP-202ENST00000472888 TK2O00142 265 aa13.67□□□□□ -0.22
RFXAP-202ENST00000472888 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
RFXAP-202ENST00000472888 FOXK1P85037 733 aa13.66□□□□□ -0.22
RFXAP-202ENST00000472888 PLPP6Q8IY26 295 aa13.64□□□□□ -0.23
RFXAP-202ENST00000472888 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
RFXAP-202ENST00000472888 DSG2Q14126 1118 aa13.61□□□□□ -0.23
RFXAP-202ENST00000472888 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
RFXAP-202ENST00000472888 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
RFXAP-202ENST00000472888 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
RFXAP-202ENST00000472888 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
RFXAP-202ENST00000472888 KCNK17Q96T54 332 aa13.51□□□□□ -0.25
RFXAP-202ENST00000472888 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
RFXAP-202ENST00000472888 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
RFXAP-202ENST00000472888 TBC1D12O60347 775 aa13.47□□□□□ -0.25
RFXAP-202ENST00000472888 PDE4AP27815 886 aa13.47□□□□□ -0.25
RFXAP-202ENST00000472888 CRISPLD2Q9H0B8 497 aa13.42□□□□□ -0.26
RFXAP-202ENST00000472888 UPF1Q92900 1129 aaKnown RBP eCLIP13.41□□□□□ -0.26
RFXAP-202ENST00000472888 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
RFXAP-202ENST00000472888 SLC4A5Q9BY07 1137 aa13.4□□□□□ -0.26
RFXAP-202ENST00000472888 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
RFXAP-202ENST00000472888 ZNF454Q8N9F8 522 aa13.39□□□□□ -0.27
RFXAP-202ENST00000472888 FOSBP53539 338 aa13.38□□□□□ -0.27
RFXAP-202ENST00000472888 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
RFXAP-202ENST00000472888 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
RFXAP-202ENST00000472888 PTPN5P54829 565 aa13.36□□□□□ -0.27
RFXAP-202ENST00000472888 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
RFXAP-202ENST00000472888 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
RFXAP-202ENST00000472888 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
RFXAP-202ENST00000472888 NCKAP5LQ9HCH0 1330 aa13.35□□□□□ -0.27
RFXAP-202ENST00000472888 PPP1R15BQ5SWA1 713 aa13.34□□□□□ -0.27
RFXAP-202ENST00000472888 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
RFXAP-202ENST00000472888 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
RFXAP-202ENST00000472888 THSD4Q6ZMP0 1018 aa13.33□□□□□ -0.28
RFXAP-202ENST00000472888 CADPS2Q86UW7 1296 aa13.32□□□□□ -0.28
RFXAP-202ENST00000472888 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
RFXAP-202ENST00000472888 PTPREP23469 700 aa13.29□□□□□ -0.28
RFXAP-202ENST00000472888 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
RFXAP-202ENST00000472888 MFSD10Q14728 455 aa13.27□□□□□ -0.29
RFXAP-202ENST00000472888 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
RFXAP-202ENST00000472888 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
RFXAP-202ENST00000472888 RGS20O76081 388 aa13.25□□□□□ -0.29
RFXAP-202ENST00000472888 A0A0G2JS52 829 aa13.24□□□□□ -0.29
RFXAP-202ENST00000472888 EVI5O60447 810 aa13.24□□□□□ -0.29
RFXAP-202ENST00000472888 WNT2BQ93097 391 aa13.24□□□□□ -0.29
RFXAP-202ENST00000472888 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
RFXAP-202ENST00000472888 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
RFXAP-202ENST00000472888 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms