RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
GAPVD1-211ENST00000467707 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
GAPVD1-211ENST00000467707 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
GAPVD1-211ENST00000467707 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
GAPVD1-211ENST00000467707 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
GAPVD1-211ENST00000467707 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
GAPVD1-211ENST00000467707 POTEHQ6S545 545 aa11.12□□□□□ -0.63
GAPVD1-211ENST00000467707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.12□□□□□ -0.63
GAPVD1-211ENST00000467707 TMC2Q8TDI7 906 aa11.12□□□□□ -0.63
GAPVD1-211ENST00000467707 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
GAPVD1-211ENST00000467707 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
GAPVD1-211ENST00000467707 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
GAPVD1-211ENST00000467707 SEC24BO95487 1268 aa11.08□□□□□ -0.64
GAPVD1-211ENST00000467707 FOXK1P85037 733 aa11.08□□□□□ -0.64
GAPVD1-211ENST00000467707 SLC39A7Q92504 469 aa11.07□□□□□ -0.64
GAPVD1-211ENST00000467707 SEMA3EO15041 775 aa11.06□□□□□ -0.64
GAPVD1-211ENST00000467707 C7P10643 843 aa11.05□□□□□ -0.64
GAPVD1-211ENST00000467707 DSG2Q14126 1118 aa11.04□□□□□ -0.64
GAPVD1-211ENST00000467707 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-211ENST00000467707 KIF3CO14782 793 aa11.02□□□□□ -0.65
GAPVD1-211ENST00000467707 C2orf72A6NCS6 295 aa10.99□□□□□ -0.65
GAPVD1-211ENST00000467707 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
GAPVD1-211ENST00000467707 PDIA6Q15084 440 aa10.98□□□□□ -0.65
GAPVD1-211ENST00000467707 PLPP6Q8IY26 295 aa10.98□□□□□ -0.65
GAPVD1-211ENST00000467707 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
GAPVD1-211ENST00000467707 COLQQ9Y215 455 aaPredicted RBP10.97□□□□□ -0.65
GAPVD1-211ENST00000467707 METRNQ9UJH8 293 aa10.96□□□□□ -0.65
GAPVD1-211ENST00000467707 DPYSL4O14531 572 aa10.95□□□□□ -0.66
GAPVD1-211ENST00000467707 SP7Q8TDD2 431 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-211ENST00000467707 ZC3H15Q8WU90 426 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-211ENST00000467707 C3orf67Q6ZVT6 689 aa10.92□□□□□ -0.66
GAPVD1-211ENST00000467707 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
GAPVD1-211ENST00000467707 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
GAPVD1-211ENST00000467707 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
GAPVD1-211ENST00000467707 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
GAPVD1-211ENST00000467707 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
GAPVD1-211ENST00000467707 ZMYND10O75800 440 aa10.86□□□□□ -0.67
GAPVD1-211ENST00000467707 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
GAPVD1-211ENST00000467707 TBC1D12O60347 775 aa10.85□□□□□ -0.67
GAPVD1-211ENST00000467707 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
GAPVD1-211ENST00000467707 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
GAPVD1-211ENST00000467707 SLC34A2O95436 690 aa10.82□□□□□ -0.68
GAPVD1-211ENST00000467707 PTGER2P43116 358 aa10.82□□□□□ -0.68
GAPVD1-211ENST00000467707 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-211ENST00000467707 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
GAPVD1-211ENST00000467707 PTCD2Q8WV60 388 aaKnown RBP10.81□□□□□ -0.68
GAPVD1-211ENST00000467707 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.68
GAPVD1-211ENST00000467707 BARGINQ6ZT62 677 aa10.8□□□□□ -0.68
GAPVD1-211ENST00000467707 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
GAPVD1-211ENST00000467707 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
GAPVD1-211ENST00000467707 EVI5O60447 810 aa10.75□□□□□ -0.69
GAPVD1-211ENST00000467707 TMEM132AQ24JP5 1023 aa10.75□□□□□ -0.69
GAPVD1-211ENST00000467707 AK7Q96M32 723 aa10.73□□□□□ -0.69
GAPVD1-211ENST00000467707 OSBPP22059 807 aa10.72□□□□□ -0.69
GAPVD1-211ENST00000467707 ANO8Q9HCE9 1232 aaPredicted RBP10.72□□□□□ -0.69
GAPVD1-211ENST00000467707 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-211ENST00000467707 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
GAPVD1-211ENST00000467707 DDX12PQ92771 950 aa10.69□□□□□ -0.7
GAPVD1-211ENST00000467707 NUTM2FA1L443 756 aa10.68□□□□□ -0.7
GAPVD1-211ENST00000467707 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
GAPVD1-211ENST00000467707 GPR37O15354 613 aa10.67□□□□□ -0.7
GAPVD1-211ENST00000467707 FCHSD2O94868 740 aa10.67□□□□□ -0.7
GAPVD1-211ENST00000467707 NEUROD2Q15784 382 aa10.67□□□□□ -0.7
GAPVD1-211ENST00000467707 MAMSTRQ6ZN01 415 aa10.67□□□□□ -0.7
GAPVD1-211ENST00000467707 EPAS1Q99814 870 aa10.67□□□□□ -0.7
GAPVD1-211ENST00000467707 PHF14O94880 888 aa10.66□□□□□ -0.7
GAPVD1-211ENST00000467707 HIC1Q14526 733 aa10.66□□□□□ -0.7
GAPVD1-211ENST00000467707 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
GAPVD1-211ENST00000467707 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-211ENST00000467707 MAP2K5Q13163 448 aa10.64□□□□□ -0.71
GAPVD1-211ENST00000467707 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
GAPVD1-211ENST00000467707 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
GAPVD1-211ENST00000467707 GNPATO15228 680 aa10.63□□□□□ -0.71
GAPVD1-211ENST00000467707 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
GAPVD1-211ENST00000467707 SCUBE2Q9NQ36 999 aa10.63□□□□□ -0.71
GAPVD1-211ENST00000467707 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-211ENST00000467707 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
GAPVD1-211ENST00000467707 PTGDRQ13258 359 aa10.6□□□□□ -0.71
GAPVD1-211ENST00000467707 JPH4Q96JJ6 628 aa10.6□□□□□ -0.71
GAPVD1-211ENST00000467707 TRIM66O15016 1216 aa10.59□□□□□ -0.71
GAPVD1-211ENST00000467707 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
GAPVD1-211ENST00000467707 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
GAPVD1-211ENST00000467707 KDM4FA0A1W2PPD8 638 aa10.58□□□□□ -0.72
GAPVD1-211ENST00000467707 IRF6O14896 467 aa10.58□□□□□ -0.72
GAPVD1-211ENST00000467707 MAP3K7O43318 606 aa10.57□□□□□ -0.72
GAPVD1-211ENST00000467707 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
GAPVD1-211ENST00000467707 POTEJP0CG39 1038 aa10.56□□□□□ -0.72
GAPVD1-211ENST00000467707 PDE4DQ08499 809 aa10.56□□□□□ -0.72
GAPVD1-211ENST00000467707 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
GAPVD1-211ENST00000467707 PRIM1P49642 420 aaKnown RBP10.55□□□□□ -0.72
GAPVD1-211ENST00000467707 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
GAPVD1-211ENST00000467707 CERKQ8TCT0 537 aa10.54□□□□□ -0.72
GAPVD1-211ENST00000467707 CCDC102AQ96A19 550 aa10.54□□□□□ -0.72
GAPVD1-211ENST00000467707 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
GAPVD1-211ENST00000467707 HOXB3P14651 431 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-211ENST00000467707 FOSBP53539 338 aa10.53□□□□□ -0.72
GAPVD1-211ENST00000467707 ZNF710Q8N1W2 664 aa10.53□□□□□ -0.72
GAPVD1-211ENST00000467707 SNPHO15079 494 aa10.52□□□□□ -0.73
GAPVD1-211ENST00000467707 AMHR2Q16671 573 aa10.52□□□□□ -0.73
GAPVD1-211ENST00000467707 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms