RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
CCDC50-203ENST00000460064 IER5LQ5T953 404 aa11.86□□□□□ -0.51
CCDC50-203ENST00000460064 TESPA1A2RU30 521 aaPredicted RBP11.85□□□□□ -0.51
CCDC50-203ENST00000460064 G3V3G9 751 aa11.85□□□□□ -0.51
CCDC50-203ENST00000460064 ARIH1Q9Y4X5 557 aaPredicted RBP11.85□□□□□ -0.51
CCDC50-203ENST00000460064 TMC2Q8TDI7 906 aa11.84□□□□□ -0.51
CCDC50-203ENST00000460064 BOLA1Q9Y3E2 137 aa11.83□□□□□ -0.52
CCDC50-203ENST00000460064 PLCG2P16885 1265 aa11.82□□□□□ -0.52
CCDC50-203ENST00000460064 SMYD5Q6GMV2 418 aa11.82□□□□□ -0.52
CCDC50-203ENST00000460064 DSG2Q14126 1118 aa11.81□□□□□ -0.52
CCDC50-203ENST00000460064 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
CCDC50-203ENST00000460064 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
CCDC50-203ENST00000460064 SEC24BO95487 1268 aa11.78□□□□□ -0.52
CCDC50-203ENST00000460064 FOXK1P85037 733 aa11.78□□□□□ -0.52
CCDC50-203ENST00000460064 L3MBTL3Q96JM7 780 aaPredicted RBP11.78□□□□□ -0.52
CCDC50-203ENST00000460064 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
CCDC50-203ENST00000460064 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
CCDC50-203ENST00000460064 C2orf72A6NCS6 295 aa11.74□□□□□ -0.53
CCDC50-203ENST00000460064 DPYSL4O14531 572 aa11.74□□□□□ -0.53
CCDC50-203ENST00000460064 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
CCDC50-203ENST00000460064 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
CCDC50-203ENST00000460064 POTEHQ6S545 545 aa11.73□□□□□ -0.53
CCDC50-203ENST00000460064 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
CCDC50-203ENST00000460064 KIF3CO14782 793 aa11.7□□□□□ -0.54
CCDC50-203ENST00000460064 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
CCDC50-203ENST00000460064 SLC39A7Q92504 469 aa11.7□□□□□ -0.54
CCDC50-203ENST00000460064 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
CCDC50-203ENST00000460064 C7P10643 843 aa11.67□□□□□ -0.54
CCDC50-203ENST00000460064 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
CCDC50-203ENST00000460064 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
CCDC50-203ENST00000460064 PDIA6Q15084 440 aa11.65□□□□□ -0.54
CCDC50-203ENST00000460064 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
CCDC50-203ENST00000460064 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
CCDC50-203ENST00000460064 POTEFA5A3E0 1075 aa11.62□□□□□ -0.55
CCDC50-203ENST00000460064 ZMYND10O75800 440 aa11.62□□□□□ -0.55
CCDC50-203ENST00000460064 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
CCDC50-203ENST00000460064 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC50-203ENST00000460064 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
CCDC50-203ENST00000460064 GPIHBP1Q8IV16 184 aa11.59□□□□□ -0.55
CCDC50-203ENST00000460064 GRXCR2A6NFK2 248 aa11.57□□□□□ -0.56
CCDC50-203ENST00000460064 TBC1D12O60347 775 aa11.57□□□□□ -0.56
CCDC50-203ENST00000460064 BARGINQ6ZT62 677 aa11.57□□□□□ -0.56
CCDC50-203ENST00000460064 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
CCDC50-203ENST00000460064 KRI1Q8N9T8 703 aaKnown RBP11.55□□□□□ -0.56
CCDC50-203ENST00000460064 OXER1Q8TDS5 423 aa11.55□□□□□ -0.56
CCDC50-203ENST00000460064 TMEM132AQ24JP5 1023 aa11.54□□□□□ -0.56
CCDC50-203ENST00000460064 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
CCDC50-203ENST00000460064 BRPF1P55201 1214 aaPredicted RBP11.53□□□□□ -0.56
CCDC50-203ENST00000460064 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
CCDC50-203ENST00000460064 EVI5O60447 810 aa11.49□□□□□ -0.57
CCDC50-203ENST00000460064 DDX12PQ92771 950 aa11.49□□□□□ -0.57
CCDC50-203ENST00000460064 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
CCDC50-203ENST00000460064 PTGER2P43116 358 aa11.48□□□□□ -0.57
CCDC50-203ENST00000460064 AK7Q96M32 723 aa11.48□□□□□ -0.57
CCDC50-203ENST00000460064 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
CCDC50-203ENST00000460064 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
CCDC50-203ENST00000460064 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
CCDC50-203ENST00000460064 OSBPP22059 807 aa11.46□□□□□ -0.57
CCDC50-203ENST00000460064 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
CCDC50-203ENST00000460064 SLC34A2O95436 690 aa11.43□□□□□ -0.58
CCDC50-203ENST00000460064 GPR37O15354 613 aa11.4□□□□□ -0.58
CCDC50-203ENST00000460064 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
CCDC50-203ENST00000460064 TRIM66O15016 1216 aa11.37□□□□□ -0.59
CCDC50-203ENST00000460064 GNPATO15228 680 aa11.36□□□□□ -0.59
CCDC50-203ENST00000460064 FCHSD2O94868 740 aa11.36□□□□□ -0.59
CCDC50-203ENST00000460064 PCDHGA4Q9Y5G9 962 aa11.36□□□□□ -0.59
CCDC50-203ENST00000460064 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
CCDC50-203ENST00000460064 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
CCDC50-203ENST00000460064 HIC1Q14526 733 aa11.34□□□□□ -0.59
CCDC50-203ENST00000460064 PDE4DQ08499 809 aa11.33□□□□□ -0.6
CCDC50-203ENST00000460064 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
CCDC50-203ENST00000460064 IRF6O14896 467 aa11.32□□□□□ -0.6
CCDC50-203ENST00000460064 PHF14O94880 888 aa11.32□□□□□ -0.6
CCDC50-203ENST00000460064 MAP2K5Q13163 448 aa11.32□□□□□ -0.6
CCDC50-203ENST00000460064 EPAS1Q99814 870 aa11.32□□□□□ -0.6
CCDC50-203ENST00000460064 FECHP22830 423 aa11.31□□□□□ -0.6
CCDC50-203ENST00000460064 PTGDRQ13258 359 aa11.3□□□□□ -0.6
CCDC50-203ENST00000460064 CCDC102AQ96A19 550 aa11.29□□□□□ -0.6
CCDC50-203ENST00000460064 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
CCDC50-203ENST00000460064 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
CCDC50-203ENST00000460064 MAP3K7O43318 606 aa11.28□□□□□ -0.6
CCDC50-203ENST00000460064 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
CCDC50-203ENST00000460064 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
CCDC50-203ENST00000460064 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
CCDC50-203ENST00000460064 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
CCDC50-203ENST00000460064 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
CCDC50-203ENST00000460064 DAXXQ9UER7 740 aaPredicted RBP11.27□□□□□ -0.61
CCDC50-203ENST00000460064 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
CCDC50-203ENST00000460064 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
CCDC50-203ENST00000460064 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
CCDC50-203ENST00000460064 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
CCDC50-203ENST00000460064 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
CCDC50-203ENST00000460064 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
CCDC50-203ENST00000460064 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
CCDC50-203ENST00000460064 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
CCDC50-203ENST00000460064 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
CCDC50-203ENST00000460064 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
CCDC50-203ENST00000460064 NPDC1Q9NQX5 325 aaPredicted RBP11.23□□□□□ -0.61
CCDC50-203ENST00000460064 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
CCDC50-203ENST00000460064 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 626.3 ms