RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 RIMBP2O15034 1052 aa8.57□□□□□ -1.04
RFX3-AS1-203ENST00000457566 KDM2AQ9Y2K7 1162 aa8.56□□□□□ -1.04
RFX3-AS1-203ENST00000457566 ZSWIM6Q9HCJ5 1215 aa8.52□□□□□ -1.05
RFX3-AS1-203ENST00000457566 TRIM41Q8WV44 630 aa8.51□□□□□ -1.05
RFX3-AS1-203ENST00000457566 RNF166Q96A37 237 aaPredicted RBP8.51□□□□□ -1.05
RFX3-AS1-203ENST00000457566 EFCAB3Q8N7B9 438 aa8.5□□□□□ -1.05
RFX3-AS1-203ENST00000457566 VARS2Q5ST30 1063 aaKnown RBP8.49□□□□□ -1.05
RFX3-AS1-203ENST00000457566 ZNF687Q8N1G0 1237 aa8.48□□□□□ -1.05
RFX3-AS1-203ENST00000457566 PAXIP1Q6ZW49 1069 aaPredicted RBP8.46□□□□□ -1.06
RFX3-AS1-203ENST00000457566 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.06
RFX3-AS1-203ENST00000457566 MICALL2Q8IY33 904 aa8.46□□□□□ -1.06
RFX3-AS1-203ENST00000457566 MYT1LQ9UL68 1186 aa8.46□□□□□ -1.06
RFX3-AS1-203ENST00000457566 SOX12O15370 315 aa8.45□□□□□ -1.06
RFX3-AS1-203ENST00000457566 PTGER2P43116 358 aa8.45□□□□□ -1.06
RFX3-AS1-203ENST00000457566 TMEM92Q6UXU6 159 aa8.44□□□□□ -1.06
RFX3-AS1-203ENST00000457566 GPR153Q6NV75 609 aa8.43□□□□□ -1.06
RFX3-AS1-203ENST00000457566 CFAP44Q96MT7 982 aa8.41□□□□□ -1.06
RFX3-AS1-203ENST00000457566 ARXQ96QS3 562 aa8.41□□□□□ -1.06
RFX3-AS1-203ENST00000457566 SPRYD3Q8NCJ5 442 aa8.4□□□□□ -1.06
RFX3-AS1-203ENST00000457566 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
RFX3-AS1-203ENST00000457566 DAXXQ9UER7 740 aaPredicted RBP8.38□□□□□ -1.07
RFX3-AS1-203ENST00000457566 RIOK3O14730 519 aaKnown RBP8.37□□□□□ -1.07
RFX3-AS1-203ENST00000457566 MS4A4AQ96JQ5 239 aa8.37□□□□□ -1.07
RFX3-AS1-203ENST00000457566 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
RFX3-AS1-203ENST00000457566 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
RFX3-AS1-203ENST00000457566 TIMELESSQ9UNS1 1208 aa8.36□□□□□ -1.07
RFX3-AS1-203ENST00000457566 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.35□□□□□ -1.07
RFX3-AS1-203ENST00000457566 VGFO15240 615 aaPredicted RBP8.35□□□□□ -1.07
RFX3-AS1-203ENST00000457566 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
RFX3-AS1-203ENST00000457566 ZFP91Q96JP5 570 aaPredicted RBP8.35□□□□□ -1.07
RFX3-AS1-203ENST00000457566 PHF8Q9UPP1 1060 aa8.35□□□□□ -1.07
RFX3-AS1-203ENST00000457566 ZNF316A6NFI3 1004 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-203ENST00000457566 NBR1Q14596 966 aa8.33□□□□□ -1.08
RFX3-AS1-203ENST00000457566 TSHZ2Q9NRE2 1034 aa8.33□□□□□ -1.08
RFX3-AS1-203ENST00000457566 TULP1O00294 542 aaPredicted RBP8.32□□□□□ -1.08
RFX3-AS1-203ENST00000457566 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
RFX3-AS1-203ENST00000457566 NLRP6P59044 892 aa8.31□□□□□ -1.08
RFX3-AS1-203ENST00000457566 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
RFX3-AS1-203ENST00000457566 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
RFX3-AS1-203ENST00000457566 PBX2P40425 430 aa8.28□□□□□ -1.08
RFX3-AS1-203ENST00000457566 KHSRPQ92945 711 aaKnown RBP eCLIP8.28□□□□□ -1.08
RFX3-AS1-203ENST00000457566 RGL2O15211 777 aa8.26□□□□□ -1.09
RFX3-AS1-203ENST00000457566 FBXO22Q8NEZ5 403 aa8.25□□□□□ -1.09
RFX3-AS1-203ENST00000457566 KIF3CO14782 793 aa8.23□□□□□ -1.09
RFX3-AS1-203ENST00000457566 TMEM132AQ24JP5 1023 aa8.23□□□□□ -1.09
RFX3-AS1-203ENST00000457566 NUDT7P0C024 238 aa8.22□□□□□ -1.09
RFX3-AS1-203ENST00000457566 BCL11BQ9C0K0 894 aaPredicted RBP8.22□□□□□ -1.09
RFX3-AS1-203ENST00000457566 C2orf72A6NCS6 295 aa8.21□□□□□ -1.1
RFX3-AS1-203ENST00000457566 SLC34A2O95436 690 aa8.21□□□□□ -1.1
RFX3-AS1-203ENST00000457566 PLA2G2EQ9NZK7 142 aa8.2□□□□□ -1.1
RFX3-AS1-203ENST00000457566 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
RFX3-AS1-203ENST00000457566 LHX6Q9UPM6 363 aa8.2□□□□□ -1.1
RFX3-AS1-203ENST00000457566 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
RFX3-AS1-203ENST00000457566 STK24Q9Y6E0 443 aa8.19□□□□□ -1.1
RFX3-AS1-203ENST00000457566 CHGAP10645 457 aaKnown RBP8.18□□□□□ -1.1
RFX3-AS1-203ENST00000457566 POTEEQ6S8J3 1075 aa8.18□□□□□ -1.1
RFX3-AS1-203ENST00000457566 PCDHGA4Q9Y5G9 962 aa8.18□□□□□ -1.1
RFX3-AS1-203ENST00000457566 PSDA5PKW4 1024 aaPredicted RBP8.17□□□□□ -1.1
RFX3-AS1-203ENST00000457566 AXIN2Q9Y2T1 843 aa8.17□□□□□ -1.1
RFX3-AS1-203ENST00000457566 HOMEZQ8IX15 550 aa8.16□□□□□ -1.1
RFX3-AS1-203ENST00000457566 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
RFX3-AS1-203ENST00000457566 HS6ST3Q8IZP7 471 aa8.15□□□□□ -1.1
RFX3-AS1-203ENST00000457566 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
RFX3-AS1-203ENST00000457566 STK25O00506 426 aa8.14□□□□□ -1.11
RFX3-AS1-203ENST00000457566 ADGRD1Q6QNK2 874 aa8.14□□□□□ -1.11
RFX3-AS1-203ENST00000457566 TK2O00142 265 aa8.11□□□□□ -1.11
RFX3-AS1-203ENST00000457566 PTCD2Q8WV60 388 aaKnown RBP8.07□□□□□ -1.12
RFX3-AS1-203ENST00000457566 KDM4FA0A1W2PPD8 638 aa8.06□□□□□ -1.12
RFX3-AS1-203ENST00000457566 HRO43593 1189 aa8.06□□□□□ -1.12
RFX3-AS1-203ENST00000457566 C14orf37Q86TY3 774 aa8.05□□□□□ -1.12
RFX3-AS1-203ENST00000457566 STAC3Q96MF2 364 aa8.05□□□□□ -1.12
RFX3-AS1-203ENST00000457566 DMRTA1Q5VZB9 504 aa8.04□□□□□ -1.12
RFX3-AS1-203ENST00000457566 PSEN2P49810 448 aa8.03□□□□□ -1.12
RFX3-AS1-203ENST00000457566 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
RFX3-AS1-203ENST00000457566 KCTD12Q96CX2 325 aaKnown RBP8.02□□□□□ -1.13
RFX3-AS1-203ENST00000457566 TBC1D12O60347 775 aa8.01□□□□□ -1.13
RFX3-AS1-203ENST00000457566 PPP1R37O75864 691 aa8.01□□□□□ -1.13
RFX3-AS1-203ENST00000457566 FOXK1P85037 733 aa8.01□□□□□ -1.13
RFX3-AS1-203ENST00000457566 KCNH8Q96L42 1107 aa8.01□□□□□ -1.13
RFX3-AS1-203ENST00000457566 GTPBP6O43824 516 aaPredicted RBP7.99□□□□□ -1.13
RFX3-AS1-203ENST00000457566 NKX1-1Q15270 411 aaPredicted RBP7.99□□□□□ -1.13
RFX3-AS1-203ENST00000457566 PLPP6Q8IY26 295 aa7.99□□□□□ -1.13
RFX3-AS1-203ENST00000457566 RGS20O76081 388 aa7.98□□□□□ -1.13
RFX3-AS1-203ENST00000457566 P3H3Q8IVL6 736 aa7.97□□□□□ -1.13
RFX3-AS1-203ENST00000457566 GPHNQ9NQX3 736 aaPredicted RBP7.97□□□□□ -1.13
RFX3-AS1-203ENST00000457566 IFFO2Q5TF58 517 aa7.95□□□□□ -1.14
RFX3-AS1-203ENST00000457566 KCNK17Q96T54 332 aa7.95□□□□□ -1.14
RFX3-AS1-203ENST00000457566 RYDENQ9NUL5 291 aaKnown RBP7.95□□□□□ -1.14
RFX3-AS1-203ENST00000457566 VPS9D1Q9Y2B5 631 aa7.95□□□□□ -1.14
RFX3-AS1-203ENST00000457566 PTPN5P54829 565 aa7.93□□□□□ -1.14
RFX3-AS1-203ENST00000457566 DSG2Q14126 1118 aa7.93□□□□□ -1.14
RFX3-AS1-203ENST00000457566 SLC4A5Q9BY07 1137 aa7.92□□□□□ -1.14
RFX3-AS1-203ENST00000457566 IRX2Q9BZI1 471 aaPredicted RBP7.89□□□□□ -1.15
RFX3-AS1-203ENST00000457566 BCL2L12Q9HB09 334 aa7.89□□□□□ -1.15
RFX3-AS1-203ENST00000457566 GOLGA8CPA6NN73 597 aa7.88□□□□□ -1.15
RFX3-AS1-203ENST00000457566 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
RFX3-AS1-203ENST00000457566 THSD4Q6ZMP0 1018 aa7.88□□□□□ -1.15
RFX3-AS1-203ENST00000457566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.88□□□□□ -1.15
RFX3-AS1-203ENST00000457566 ZNF454Q8N9F8 522 aa7.88□□□□□ -1.15
RFX3-AS1-203ENST00000457566 OXER1Q8TDS5 423 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms