RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 RBM10P98175 930 aaKnown RBP15.6■□□□□ 0.09
NEDD4L-208ENST00000456173 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
NEDD4L-208ENST00000456173 R3HCC1Q9Y3T6 440 aaKnown RBP15.58■□□□□ 0.08
NEDD4L-208ENST00000456173 EEA1Q15075 1411 aa15.58■□□□□ 0.08
NEDD4L-208ENST00000456173 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.58■□□□□ 0.08
NEDD4L-208ENST00000456173 DDX49Q9Y6V7 483 aaKnown RBP15.57■□□□□ 0.08
NEDD4L-208ENST00000456173 PLIN1O60240 522 aa15.57■□□□□ 0.08
NEDD4L-208ENST00000456173 TAOK2Q9UL54 1235 aa15.57■□□□□ 0.08
NEDD4L-208ENST00000456173 ZMYND15Q9H091 742 aa15.56■□□□□ 0.08
NEDD4L-208ENST00000456173 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
NEDD4L-208ENST00000456173 PPP1R15AO75807 674 aaPredicted RBP15.56■□□□□ 0.08
NEDD4L-208ENST00000456173 SYAP1Q96A49 352 aaPredicted RBP15.55■□□□□ 0.08
NEDD4L-208ENST00000456173 RRP9O43818 475 aaKnown RBP15.55■□□□□ 0.08
NEDD4L-208ENST00000456173 MS4A1P11836 297 aa15.54■□□□□ 0.08
NEDD4L-208ENST00000456173 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
NEDD4L-208ENST00000456173 RWDD1Q9H446 243 aaPredicted RBP15.53■□□□□ 0.08
NEDD4L-208ENST00000456173 FOXD4L5Q5VV16 416 aaPredicted RBP15.52■□□□□ 0.08
NEDD4L-208ENST00000456173 FOXD4L4Q8WXT5 416 aaPredicted RBP15.52■□□□□ 0.08
NEDD4L-208ENST00000456173 TPM2P07951 284 aa15.52■□□□□ 0.07
NEDD4L-208ENST00000456173 MAP7D2Q96T17 732 aa15.52■□□□□ 0.07
NEDD4L-208ENST00000456173 RRP1P56182 461 aaKnown RBP15.51■□□□□ 0.07
NEDD4L-208ENST00000456173 ZBED9Q6R2W3 1325 aa15.5■□□□□ 0.07
NEDD4L-208ENST00000456173 CENPQQ7L2Z9 268 aaPredicted RBP15.49■□□□□ 0.07
NEDD4L-208ENST00000456173 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
NEDD4L-208ENST00000456173 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
NEDD4L-208ENST00000456173 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
NEDD4L-208ENST00000456173 CRBNQ96SW2 442 aa15.49■□□□□ 0.07
NEDD4L-208ENST00000456173 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
NEDD4L-208ENST00000456173 APBB1O00213 710 aa15.48■□□□□ 0.07
NEDD4L-208ENST00000456173 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
NEDD4L-208ENST00000456173 APPP05067 770 aa15.48■□□□□ 0.07
NEDD4L-208ENST00000456173 MRE11P49959 708 aa15.48■□□□□ 0.07
NEDD4L-208ENST00000456173 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
NEDD4L-208ENST00000456173 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
NEDD4L-208ENST00000456173 MAPK8IP3Q9UPT6 1336 aa15.46■□□□□ 0.07
NEDD4L-208ENST00000456173 KCNJ4P48050 445 aa15.46■□□□□ 0.07
NEDD4L-208ENST00000456173 KANK4Q5T7N3 995 aaPredicted RBP15.46■□□□□ 0.07
NEDD4L-208ENST00000456173 MCCP23508 829 aa15.46■□□□□ 0.06
NEDD4L-208ENST00000456173 PMFBP1Q8TBY8 1022 aa15.46■□□□□ 0.06
NEDD4L-208ENST00000456173 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.06
NEDD4L-208ENST00000456173 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
NEDD4L-208ENST00000456173 FGD1P98174 961 aa15.45■□□□□ 0.06
NEDD4L-208ENST00000456173 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
NEDD4L-208ENST00000456173 CHMP4BQ9H444 224 aaKnown RBP15.45■□□□□ 0.06
NEDD4L-208ENST00000456173 CDCA8Q53HL2 280 aa15.45■□□□□ 0.06
NEDD4L-208ENST00000456173 MTERF4Q7Z6M4 381 aaKnown RBP15.45■□□□□ 0.06
NEDD4L-208ENST00000456173 NAP1L2Q9ULW6 460 aaPredicted RBP15.44■□□□□ 0.06
NEDD4L-208ENST00000456173 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
NEDD4L-208ENST00000456173 NOL8Q76FK4 1167 aaKnown RBP15.43■□□□□ 0.06
NEDD4L-208ENST00000456173 DHX57Q6P158 1386 aaKnown RBP15.43■□□□□ 0.06
NEDD4L-208ENST00000456173 GOLGA6L1Q8N7Z2 621 aa15.43■□□□□ 0.06
NEDD4L-208ENST00000456173 ITPRIPQ8IWB1 547 aa15.43■□□□□ 0.06
NEDD4L-208ENST00000456173 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
NEDD4L-208ENST00000456173 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
NEDD4L-208ENST00000456173 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
NEDD4L-208ENST00000456173 FOXD1Q16676 465 aa15.42■□□□□ 0.06
NEDD4L-208ENST00000456173 PDE3BQ13370 1112 aa15.42■□□□□ 0.06
NEDD4L-208ENST00000456173 FOXD4L6Q3SYB3 417 aaPredicted RBP15.42■□□□□ 0.06
NEDD4L-208ENST00000456173 FOXD4L3Q6VB84 417 aaPredicted RBP15.42■□□□□ 0.06
NEDD4L-208ENST00000456173 U2SURPO15042 1029 aaKnown RBP15.41■□□□□ 0.06
NEDD4L-208ENST00000456173 BCL11BQ9C0K0 894 aaPredicted RBP15.41■□□□□ 0.06
NEDD4L-208ENST00000456173 RALBP1Q15311 655 aa15.4■□□□□ 0.06
NEDD4L-208ENST00000456173 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
NEDD4L-208ENST00000456173 GOLGA2Q08379 1002 aa15.4■□□□□ 0.06
NEDD4L-208ENST00000456173 KIAA1211Q6ZU35 1233 aa15.4■□□□□ 0.06
NEDD4L-208ENST00000456173 NASPP49321 788 aaPredicted RBP15.39■□□□□ 0.06
NEDD4L-208ENST00000456173 PHF14O94880 888 aa15.39■□□□□ 0.05
NEDD4L-208ENST00000456173 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
NEDD4L-208ENST00000456173 TRAK2O60296 914 aa15.39■□□□□ 0.05
NEDD4L-208ENST00000456173 DCAF11Q8TEB1 546 aa15.38■□□□□ 0.05
NEDD4L-208ENST00000456173 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
NEDD4L-208ENST00000456173 CFAP44Q96MT7 982 aa15.37■□□□□ 0.05
NEDD4L-208ENST00000456173 HTATSF1O43719 755 aaKnown RBP15.36■□□□□ 0.05
NEDD4L-208ENST00000456173 PDE4CQ08493 712 aa15.36■□□□□ 0.05
NEDD4L-208ENST00000456173 SETQ01105 290 aaPredicted RBP15.35■□□□□ 0.05
NEDD4L-208ENST00000456173 TMF1P82094 1093 aa15.35■□□□□ 0.05
NEDD4L-208ENST00000456173 ESPNB1AK53 854 aa15.35■□□□□ 0.05
NEDD4L-208ENST00000456173 SOGA1O94964 1423 aa15.35■□□□□ 0.05
NEDD4L-208ENST00000456173 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
NEDD4L-208ENST00000456173 OS9Q13438 667 aaPredicted RBP15.34■□□□□ 0.05
NEDD4L-208ENST00000456173 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
NEDD4L-208ENST00000456173 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
NEDD4L-208ENST00000456173 CCDC66A2RUB6 948 aa15.33■□□□□ 0.04
NEDD4L-208ENST00000456173 TEX35Q5T0J7 233 aa15.33■□□□□ 0.04
NEDD4L-208ENST00000456173 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
NEDD4L-208ENST00000456173 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
NEDD4L-208ENST00000456173 NOC3LQ8WTT2 800 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-208ENST00000456173 CENPJQ9HC77 1338 aaPredicted RBP15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 ST18O60284 1047 aa15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 RNF214Q8ND24 703 aa15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 BACH2Q9BYV9 841 aa15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 IPO8O15397 1037 aaKnown RBP15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 ZHX1Q9UKY1 873 aaPredicted RBP15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 UQCRHLA0A096LP55 91 aa15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 UQCRHP07919 91 aa15.31■□□□□ 0.04
NEDD4L-208ENST00000456173 GNL2Q13823 731 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-208ENST00000456173 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
NEDD4L-208ENST00000456173 COG6Q9Y2V7 657 aa15.3■□□□□ 0.04
NEDD4L-208ENST00000456173 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-208ENST00000456173 MCTP1Q6DN14 999 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms