RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CABP2Q9NPB3 220 aa7.64□□□□□ -1.19
CDC42BPA-207ENST00000441725 LARP6Q9BRS8 491 aaKnown RBP7.64□□□□□ -1.19
CDC42BPA-207ENST00000441725 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
CDC42BPA-207ENST00000441725 BARGINQ6ZT62 677 aa7.63□□□□□ -1.19
CDC42BPA-207ENST00000441725 SLC39A7Q92504 469 aa7.63□□□□□ -1.19
CDC42BPA-207ENST00000441725 TRIM35Q9UPQ4 493 aa7.63□□□□□ -1.19
CDC42BPA-207ENST00000441725 SOX12O15370 315 aa7.62□□□□□ -1.19
CDC42BPA-207ENST00000441725 GPBP1L1Q9HC44 474 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-207ENST00000441725 C7P10643 843 aa7.61□□□□□ -1.19
CDC42BPA-207ENST00000441725 METRNQ9UJH8 293 aa7.61□□□□□ -1.19
CDC42BPA-207ENST00000441725 MFSD10Q14728 455 aa7.6□□□□□ -1.19
CDC42BPA-207ENST00000441725 PDE4AP27815 886 aa7.59□□□□□ -1.19
CDC42BPA-207ENST00000441725 ARIH1Q9Y4X5 557 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-207ENST00000441725 IER5LQ5T953 404 aa7.59□□□□□ -1.2
CDC42BPA-207ENST00000441725 CRISPLD2Q9H0B8 497 aa7.59□□□□□ -1.2
CDC42BPA-207ENST00000441725 RBM26Q5T8P6 1007 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-207ENST00000441725 DDX27Q96GQ7 796 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-207ENST00000441725 MS4A4AQ96JQ5 239 aa7.57□□□□□ -1.2
CDC42BPA-207ENST00000441725 AK7Q96M32 723 aa7.57□□□□□ -1.2
CDC42BPA-207ENST00000441725 IL27Q8NEV9 243 aa7.57□□□□□ -1.2
CDC42BPA-207ENST00000441725 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
CDC42BPA-207ENST00000441725 MLLT3P42568 568 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-207ENST00000441725 CAMK2BQ13554 666 aa7.56□□□□□ -1.2
CDC42BPA-207ENST00000441725 LHX8Q68G74 356 aa7.56□□□□□ -1.2
CDC42BPA-207ENST00000441725 GPIHBP1Q8IV16 184 aa7.55□□□□□ -1.2
CDC42BPA-207ENST00000441725 GOLGA2Q08379 1002 aa7.54□□□□□ -1.2
CDC42BPA-207ENST00000441725 KDM4CQ9H3R0 1056 aa7.54□□□□□ -1.2
CDC42BPA-207ENST00000441725 POTEFA5A3E0 1075 aa7.54□□□□□ -1.2
CDC42BPA-207ENST00000441725 KRI1Q8N9T8 703 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-207ENST00000441725 ZMYND15Q9H091 742 aa7.53□□□□□ -1.2
CDC42BPA-207ENST00000441725 SEC24BO95487 1268 aa7.53□□□□□ -1.2
CDC42BPA-207ENST00000441725 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
CDC42BPA-207ENST00000441725 COLQQ9Y215 455 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-207ENST00000441725 IRX5P78411 483 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-207ENST00000441725 MKRN3Q13064 507 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-207ENST00000441725 POTEB2H3BUK9 544 aa7.52□□□□□ -1.21
CDC42BPA-207ENST00000441725 TRIM66O15016 1216 aa7.5□□□□□ -1.21
CDC42BPA-207ENST00000441725 PLCG2P16885 1265 aa7.5□□□□□ -1.21
CDC42BPA-207ENST00000441725 PDE4DQ08499 809 aa7.49□□□□□ -1.21
CDC42BPA-207ENST00000441725 RSPH6AQ9H0K4 717 aa7.49□□□□□ -1.21
CDC42BPA-207ENST00000441725 OCEL1Q9H607 264 aa7.49□□□□□ -1.21
CDC42BPA-207ENST00000441725 ILDR1Q86SU0 546 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-207ENST00000441725 PDCD7Q8N8D1 485 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-207ENST00000441725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.47□□□□□ -1.215e-7■■■■□ 22.3
CDC42BPA-207ENST00000441725 POTEJP0CG39 1038 aa7.46□□□□□ -1.21
CDC42BPA-207ENST00000441725 PPP1R15BQ5SWA1 713 aa7.46□□□□□ -1.22
CDC42BPA-207ENST00000441725 DPYSL4O14531 572 aa7.45□□□□□ -1.22
CDC42BPA-207ENST00000441725 FAM117AQ9C073 453 aa7.45□□□□□ -1.22
CDC42BPA-207ENST00000441725 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
CDC42BPA-207ENST00000441725 GPR37O15354 613 aa7.43□□□□□ -1.22
CDC42BPA-207ENST00000441725 TRIM26Q12899 539 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-207ENST00000441725 OTUD5Q96G74 571 aa7.43□□□□□ -1.22
CDC42BPA-207ENST00000441725 ARID3AQ99856 593 aa7.43□□□□□ -1.22
CDC42BPA-207ENST00000441725 C1orf115Q9H7X2 142 aa7.43□□□□□ -1.22
CDC42BPA-207ENST00000441725 GPHNQ9NQX3 736 aaPredicted RBP7.43□□□□□ -1.22
CDC42BPA-207ENST00000441725 PDIA6Q15084 440 aa7.42□□□□□ -1.22
CDC42BPA-207ENST00000441725 MAMSTRQ6ZN01 415 aa7.42□□□□□ -1.22
CDC42BPA-207ENST00000441725 ZNF316A6NFI3 1004 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-207ENST00000441725 SCUBE2Q9NQ36 999 aa7.4□□□□□ -1.22
CDC42BPA-207ENST00000441725 PLEKHG3A1L390 1219 aa7.4□□□□□ -1.23
CDC42BPA-207ENST00000441725 DPY19L2Q6NUT2 758 aa7.39□□□□□ -1.23
CDC42BPA-207ENST00000441725 SPDYE16A6NNV3 312 aaPredicted RBP7.39□□□□□ -1.23
CDC42BPA-207ENST00000441725 DSG2Q14126 1118 aa7.39□□□□□ -1.23
CDC42BPA-207ENST00000441725 ARID3CA6NKF2 412 aa7.38□□□□□ -1.23
CDC42BPA-207ENST00000441725 HRCP23327 699 aa7.38□□□□□ -1.23
CDC42BPA-207ENST00000441725 L3MBTL3Q96JM7 780 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPA-207ENST00000441725 CCDC102AQ96A19 550 aa7.37□□□□□ -1.23
CDC42BPA-207ENST00000441725 DDRGK1Q96HY6 314 aa7.36□□□□□ -1.23
CDC42BPA-207ENST00000441725 MINK1Q8N4C8 1332 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-207ENST00000441725 PARP9Q8IXQ6 854 aa7.36□□□□□ -1.23
CDC42BPA-207ENST00000441725 MAP2K5Q13163 448 aa7.35□□□□□ -1.23
CDC42BPA-207ENST00000441725 BOLA1Q9Y3E2 137 aa7.35□□□□□ -1.23
CDC42BPA-207ENST00000441725 APBB1O00213 710 aa7.35□□□□□ -1.23
CDC42BPA-207ENST00000441725 AMHR2Q16671 573 aa7.34□□□□□ -1.23
CDC42BPA-207ENST00000441725 GRXCR2A6NFK2 248 aa7.33□□□□□ -1.24
CDC42BPA-207ENST00000441725 G3V3G9 751 aa7.33□□□□□ -1.24
CDC42BPA-207ENST00000441725 IRF6O14896 467 aa7.33□□□□□ -1.24
CDC42BPA-207ENST00000441725 C3orf67Q6ZVT6 689 aa7.33□□□□□ -1.24
CDC42BPA-207ENST00000441725 NUTM2FA1L443 756 aa7.33□□□□□ -1.24
CDC42BPA-207ENST00000441725 FOXK1P85037 733 aa7.33□□□□□ -1.24
CDC42BPA-207ENST00000441725 TMEM121BQ9BXQ6 578 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-207ENST00000441725 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-207ENST00000441725 FLIIQ13045 1269 aa7.32□□□□□ -1.24
CDC42BPA-207ENST00000441725 ONECUT3O60422 494 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-207ENST00000441725 FECHP22830 423 aa7.31□□□□□ -1.24
CDC42BPA-207ENST00000441725 RANGAP1P46060 587 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-207ENST00000441725 MICALL2Q8IY33 904 aa7.31□□□□□ -1.24
CDC42BPA-207ENST00000441725 SLAIN1Q8ND83 568 aa7.3□□□□□ -1.24
CDC42BPA-207ENST00000441725 GNPATO15228 680 aa7.3□□□□□ -1.24
CDC42BPA-207ENST00000441725 TMC2Q8TDI7 906 aa7.3□□□□□ -1.24
CDC42BPA-207ENST00000441725 OSBPP22059 807 aa7.29□□□□□ -1.24
CDC42BPA-207ENST00000441725 PLPP6Q8IY26 295 aa7.29□□□□□ -1.24
CDC42BPA-207ENST00000441725 TTLL12Q14166 644 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-207ENST00000441725 GOPCQ9HD26 462 aa7.28□□□□□ -1.24
CDC42BPA-207ENST00000441725 CLUAP1Q96AJ1 413 aa7.27□□□□□ -1.24
CDC42BPA-207ENST00000441725 HIC1Q14526 733 aa7.27□□□□□ -1.25
CDC42BPA-207ENST00000441725 MAP3K9P80192 1104 aa7.26□□□□□ -1.25
CDC42BPA-207ENST00000441725 MS4A1P11836 297 aa7.26□□□□□ -1.25
CDC42BPA-207ENST00000441725 C2orf72A6NCS6 295 aa7.25□□□□□ -1.25
CDC42BPA-207ENST00000441725 FCHSD2O94868 740 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms