RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 CLCN6P51797 869 aa11.11□□□□□ -0.63
RFC4-204ENST00000417876 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
RFC4-204ENST00000417876 ARIH1Q9Y4X5 557 aaPredicted RBP11.11□□□□□ -0.63
RFC4-204ENST00000417876 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
RFC4-204ENST00000417876 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.64
RFC4-204ENST00000417876 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
RFC4-204ENST00000417876 DSG2Q14126 1118 aa11.06□□□□□ -0.64
RFC4-204ENST00000417876 OCEL1Q9H607 264 aa11.06□□□□□ -0.64
RFC4-204ENST00000417876 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
RFC4-204ENST00000417876 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
RFC4-204ENST00000417876 ZC3H15Q8WU90 426 aaKnown RBP11.04□□□□□ -0.64
RFC4-204ENST00000417876 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
RFC4-204ENST00000417876 IER5LQ5T953 404 aa11.03□□□□□ -0.64
RFC4-204ENST00000417876 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
RFC4-204ENST00000417876 TULP1O00294 542 aaPredicted RBP11□□□□□ -0.65
RFC4-204ENST00000417876 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
RFC4-204ENST00000417876 FOXK1P85037 733 aa11□□□□□ -0.65
RFC4-204ENST00000417876 KIF3CO14782 793 aa10.99□□□□□ -0.65
RFC4-204ENST00000417876 C2orf72A6NCS6 295 aa10.98□□□□□ -0.65
RFC4-204ENST00000417876 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
RFC4-204ENST00000417876 DPYSL4O14531 572 aa10.98□□□□□ -0.65
RFC4-204ENST00000417876 TMC2Q8TDI7 906 aa10.98□□□□□ -0.65
RFC4-204ENST00000417876 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
RFC4-204ENST00000417876 TMEM92Q6UXU6 159 aa10.97□□□□□ -0.65
RFC4-204ENST00000417876 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
RFC4-204ENST00000417876 PLPP6Q8IY26 295 aa10.96□□□□□ -0.65
RFC4-204ENST00000417876 PLCG2P16885 1265 aa10.95□□□□□ -0.66
RFC4-204ENST00000417876 PLSCR2Q9NRY7 297 aa10.95□□□□□ -0.66
RFC4-204ENST00000417876 RBM26Q5T8P6 1007 aaKnown RBP10.94□□□□□ -0.66
RFC4-204ENST00000417876 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
RFC4-204ENST00000417876 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
RFC4-204ENST00000417876 ZMYND10O75800 440 aa10.92□□□□□ -0.66
RFC4-204ENST00000417876 SLC24A3Q9HC58 644 aa10.92□□□□□ -0.66
RFC4-204ENST00000417876 PDIA6Q15084 440 aa10.91□□□□□ -0.66
RFC4-204ENST00000417876 L3MBTL3Q96JM7 780 aaPredicted RBP10.9□□□□□ -0.66
RFC4-204ENST00000417876 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
RFC4-204ENST00000417876 G3V3G9 751 aa10.88□□□□□ -0.67
RFC4-204ENST00000417876 SEC24BO95487 1268 aa10.88□□□□□ -0.67
RFC4-204ENST00000417876 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
RFC4-204ENST00000417876 BARGINQ6ZT62 677 aa10.85□□□□□ -0.67
RFC4-204ENST00000417876 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
RFC4-204ENST00000417876 C7P10643 843 aa10.83□□□□□ -0.68
RFC4-204ENST00000417876 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
RFC4-204ENST00000417876 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
RFC4-204ENST00000417876 TMEM132AQ24JP5 1023 aa10.82□□□□□ -0.68
RFC4-204ENST00000417876 GPIHBP1Q8IV16 184 aa10.82□□□□□ -0.68
RFC4-204ENST00000417876 OXER1Q8TDS5 423 aa10.82□□□□□ -0.68
RFC4-204ENST00000417876 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
RFC4-204ENST00000417876 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
RFC4-204ENST00000417876 GPR37O15354 613 aa10.78□□□□□ -0.68
RFC4-204ENST00000417876 POTEJP0CG39 1038 aa10.77□□□□□ -0.69
RFC4-204ENST00000417876 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
RFC4-204ENST00000417876 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
RFC4-204ENST00000417876 OSBPP22059 807 aa10.75□□□□□ -0.69
RFC4-204ENST00000417876 POTEMA6NI47 508 aa10.74□□□□□ -0.69
RFC4-204ENST00000417876 PTGER2P43116 358 aa10.74□□□□□ -0.69
RFC4-204ENST00000417876 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
RFC4-204ENST00000417876 DDX12PQ92771 950 aa10.73□□□□□ -0.69
RFC4-204ENST00000417876 PTCD2Q8WV60 388 aaKnown RBP10.72□□□□□ -0.69
RFC4-204ENST00000417876 AK7Q96M32 723 aa10.72□□□□□ -0.69
RFC4-204ENST00000417876 EVI5O60447 810 aa10.71□□□□□ -0.69
RFC4-204ENST00000417876 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
RFC4-204ENST00000417876 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
RFC4-204ENST00000417876 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
RFC4-204ENST00000417876 TBC1D12O60347 775 aa10.69□□□□□ -0.7
RFC4-204ENST00000417876 NUTM2FA1L443 756 aa10.68□□□□□ -0.7
RFC4-204ENST00000417876 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
RFC4-204ENST00000417876 TRIM66O15016 1216 aa10.67□□□□□ -0.7
RFC4-204ENST00000417876 SLC34A2O95436 690 aa10.67□□□□□ -0.7
RFC4-204ENST00000417876 GPBP1L1Q9HC44 474 aaPredicted RBP10.67□□□□□ -0.7
RFC4-204ENST00000417876 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
RFC4-204ENST00000417876 FECHP22830 423 aa10.66□□□□□ -0.7
RFC4-204ENST00000417876 LCE2DQ5TA82 110 aaPredicted RBP10.63□□□□□ -0.71
RFC4-204ENST00000417876 PDE4DQ08499 809 aa10.62□□□□□ -0.71
RFC4-204ENST00000417876 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
RFC4-204ENST00000417876 MINK1Q8N4C8 1332 aaPredicted RBP10.6□□□□□ -0.71
RFC4-204ENST00000417876 KDM4FA0A1W2PPD8 638 aa10.6□□□□□ -0.71
RFC4-204ENST00000417876 GNPATO15228 680 aa10.6□□□□□ -0.71
RFC4-204ENST00000417876 IRF6O14896 467 aa10.59□□□□□ -0.71
RFC4-204ENST00000417876 PTGDRQ13258 359 aa10.59□□□□□ -0.71
RFC4-204ENST00000417876 KDM4CQ9H3R0 1056 aa10.59□□□□□ -0.71
RFC4-204ENST00000417876 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
RFC4-204ENST00000417876 FCHSD2O94868 740 aa10.58□□□□□ -0.72
RFC4-204ENST00000417876 MAP2K5Q13163 448 aa10.58□□□□□ -0.72
RFC4-204ENST00000417876 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
RFC4-204ENST00000417876 HIC1Q14526 733 aa10.57□□□□□ -0.72
RFC4-204ENST00000417876 CDHR5Q9HBB8 845 aa10.57□□□□□ -0.72
RFC4-204ENST00000417876 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
RFC4-204ENST00000417876 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
RFC4-204ENST00000417876 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
RFC4-204ENST00000417876 PHF14O94880 888 aa10.55□□□□□ -0.72
RFC4-204ENST00000417876 EN1Q05925 392 aaPredicted RBP10.54□□□□□ -0.72
RFC4-204ENST00000417876 FAM163AQ96GL9 167 aaPredicted RBP10.53□□□□□ -0.72
RFC4-204ENST00000417876 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
RFC4-204ENST00000417876 TSR1Q2NL82 804 aaKnown RBP10.52□□□□□ -0.73
RFC4-204ENST00000417876 KHSRPQ92945 711 aaKnown RBP eCLIP10.52□□□□□ -0.73
RFC4-204ENST00000417876 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
RFC4-204ENST00000417876 EPAS1Q99814 870 aa10.52□□□□□ -0.73
RFC4-204ENST00000417876 HOXB3P14651 431 aaPredicted RBP10.51□□□□□ -0.73
RFC4-204ENST00000417876 AMHR2Q16671 573 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms