RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SEMA3EO15041 775 aa11.19□□□□□ -0.62
LSM5-206ENST00000409987 IER5LQ5T953 404 aa11.19□□□□□ -0.62
LSM5-206ENST00000409987 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
LSM5-206ENST00000409987 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
LSM5-206ENST00000409987 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
LSM5-206ENST00000409987 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
LSM5-206ENST00000409987 PPP1R15BQ5SWA1 713 aa11.17□□□□□ -0.62
LSM5-206ENST00000409987 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
LSM5-206ENST00000409987 DSG2Q14126 1118 aa11.13□□□□□ -0.63
LSM5-206ENST00000409987 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
LSM5-206ENST00000409987 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
LSM5-206ENST00000409987 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
LSM5-206ENST00000409987 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
LSM5-206ENST00000409987 PLCG2P16885 1265 aa11.11□□□□□ -0.63
LSM5-206ENST00000409987 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
LSM5-206ENST00000409987 EMILIN3Q9NT22 766 aa11.09□□□□□ -0.63
LSM5-206ENST00000409987 FOXK1P85037 733 aa11.08□□□□□ -0.64
LSM5-206ENST00000409987 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
LSM5-206ENST00000409987 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
LSM5-206ENST00000409987 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
LSM5-206ENST00000409987 KIF3CO14782 793 aa11.07□□□□□ -0.64
LSM5-206ENST00000409987 G3V3G9 751 aa11.06□□□□□ -0.64
LSM5-206ENST00000409987 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
LSM5-206ENST00000409987 DPYSL4O14531 572 aa11.04□□□□□ -0.64
LSM5-206ENST00000409987 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
LSM5-206ENST00000409987 L3MBTL3Q96JM7 780 aaPredicted RBP11.04□□□□□ -0.64
LSM5-206ENST00000409987 POTEFA5A3E0 1075 aa11.03□□□□□ -0.64
LSM5-206ENST00000409987 SEC24BO95487 1268 aa11.03□□□□□ -0.64
LSM5-206ENST00000409987 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
LSM5-206ENST00000409987 MLLT3P42568 568 aaPredicted RBP11.02□□□□□ -0.65
LSM5-206ENST00000409987 TMEM92Q6UXU6 159 aa11.02□□□□□ -0.65
LSM5-206ENST00000409987 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
LSM5-206ENST00000409987 PDIA6Q15084 440 aa10.99□□□□□ -0.65
LSM5-206ENST00000409987 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
LSM5-206ENST00000409987 C7P10643 843 aa10.98□□□□□ -0.65
LSM5-206ENST00000409987 METRNQ9UJH8 293 aa10.96□□□□□ -0.65
LSM5-206ENST00000409987 RBM26Q5T8P6 1007 aaKnown RBP10.95□□□□□ -0.66
LSM5-206ENST00000409987 ZMYND10O75800 440 aa10.93□□□□□ -0.66
LSM5-206ENST00000409987 SLC24A3Q9HC58 644 aa10.92□□□□□ -0.66
LSM5-206ENST00000409987 UPF1Q92900 1129 aaKnown RBP eCLIP10.91□□□□□ -0.66
LSM5-206ENST00000409987 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
LSM5-206ENST00000409987 OXER1Q8TDS5 423 aa10.9□□□□□ -0.66
LSM5-206ENST00000409987 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
LSM5-206ENST00000409987 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
LSM5-206ENST00000409987 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
LSM5-206ENST00000409987 POTEMA6NI47 508 aa10.86□□□□□ -0.67
LSM5-206ENST00000409987 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
LSM5-206ENST00000409987 GRXCR2A6NFK2 248 aa10.84□□□□□ -0.67
LSM5-206ENST00000409987 GPR37O15354 613 aa10.81□□□□□ -0.68
LSM5-206ENST00000409987 PTGER2P43116 358 aa10.81□□□□□ -0.68
LSM5-206ENST00000409987 EVI5O60447 810 aa10.8□□□□□ -0.68
LSM5-206ENST00000409987 OSBPP22059 807 aa10.8□□□□□ -0.68
LSM5-206ENST00000409987 TMEM132AQ24JP5 1023 aa10.8□□□□□ -0.68
LSM5-206ENST00000409987 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
LSM5-206ENST00000409987 PTCD2Q8WV60 388 aaKnown RBP10.8□□□□□ -0.68
LSM5-206ENST00000409987 TBC1D12O60347 775 aa10.79□□□□□ -0.68
LSM5-206ENST00000409987 SLC34A2O95436 690 aa10.78□□□□□ -0.68
LSM5-206ENST00000409987 NEUROD2Q15784 382 aa10.78□□□□□ -0.68
LSM5-206ENST00000409987 DDX12PQ92771 950 aa10.78□□□□□ -0.68
LSM5-206ENST00000409987 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
LSM5-206ENST00000409987 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
LSM5-206ENST00000409987 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.77□□□□□ -0.69
LSM5-206ENST00000409987 AK7Q96M32 723 aa10.76□□□□□ -0.69
LSM5-206ENST00000409987 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
LSM5-206ENST00000409987 PRIM1P49642 420 aaKnown RBP10.75□□□□□ -0.69
LSM5-206ENST00000409987 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
LSM5-206ENST00000409987 NUTM2FA1L443 756 aa10.74□□□□□ -0.69
LSM5-206ENST00000409987 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
LSM5-206ENST00000409987 ZNF316A6NFI3 1004 aaPredicted RBP10.71□□□□□ -0.69
LSM5-206ENST00000409987 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
LSM5-206ENST00000409987 GTF3C3Q9Y5Q9 886 aa10.7□□□□□ -0.7
LSM5-206ENST00000409987 PCDHGA4Q9Y5G9 962 aa10.69□□□□□ -0.7
LSM5-206ENST00000409987 TRIM66O15016 1216 aa10.68□□□□□ -0.7
LSM5-206ENST00000409987 FCHSD2O94868 740 aa10.67□□□□□ -0.7
LSM5-206ENST00000409987 GPBP1L1Q9HC44 474 aaPredicted RBP10.67□□□□□ -0.7
LSM5-206ENST00000409987 GNPATO15228 680 aa10.66□□□□□ -0.7
LSM5-206ENST00000409987 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
LSM5-206ENST00000409987 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
LSM5-206ENST00000409987 FECHP22830 423 aa10.65□□□□□ -0.7
LSM5-206ENST00000409987 MAP2K5Q13163 448 aa10.65□□□□□ -0.7
LSM5-206ENST00000409987 HIC1Q14526 733 aa10.65□□□□□ -0.7
LSM5-206ENST00000409987 PHF14O94880 888 aa10.64□□□□□ -0.71
LSM5-206ENST00000409987 PDE4DQ08499 809 aa10.64□□□□□ -0.71
LSM5-206ENST00000409987 PTGDRQ13258 359 aa10.64□□□□□ -0.71
LSM5-206ENST00000409987 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
LSM5-206ENST00000409987 IRF6O14896 467 aa10.63□□□□□ -0.71
LSM5-206ENST00000409987 EN1Q05925 392 aaPredicted RBP10.63□□□□□ -0.71
LSM5-206ENST00000409987 EPAS1Q99814 870 aa10.63□□□□□ -0.71
LSM5-206ENST00000409987 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
LSM5-206ENST00000409987 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
LSM5-206ENST00000409987 RBM33Q96EV2 1170 aaKnown RBP10.6□□□□□ -0.71
LSM5-206ENST00000409987 KDM4CQ9H3R0 1056 aa10.6□□□□□ -0.71
LSM5-206ENST00000409987 NPDC1Q9NQX5 325 aaPredicted RBP10.6□□□□□ -0.71
LSM5-206ENST00000409987 MAP3K7O43318 606 aa10.59□□□□□ -0.71
LSM5-206ENST00000409987 HOXB3P14651 431 aaPredicted RBP10.59□□□□□ -0.71
LSM5-206ENST00000409987 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
LSM5-206ENST00000409987 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
LSM5-206ENST00000409987 JPH4Q96JJ6 628 aa10.58□□□□□ -0.72
LSM5-206ENST00000409987 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
LSM5-206ENST00000409987 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms