RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 MTUS2Q5JR59 1369 aa19.9■□□□□ 0.78
NDEL1-203ENST00000402554 FRMPD1Q5SYB0 1578 aa19.9■□□□□ 0.78
NDEL1-203ENST00000402554 EHBP1L1Q8N3D4 1523 aa19.9■□□□□ 0.78
NDEL1-203ENST00000402554 ARHGAP5Q13017 1502 aa19.89■□□□□ 0.78
NDEL1-203ENST00000402554 AKNAQ7Z591 1439 aa19.89■□□□□ 0.77
NDEL1-203ENST00000402554 RICTORQ6R327 1708 aa19.86■□□□□ 0.77
NDEL1-203ENST00000402554 RAPGEF3O95398 923 aa19.86■□□□□ 0.77
NDEL1-203ENST00000402554 ADGRL1O94910 1474 aa19.84■□□□□ 0.77
NDEL1-203ENST00000402554 PHLDB1Q86UU1 1377 aa19.84■□□□□ 0.77
NDEL1-203ENST00000402554 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.77
NDEL1-203ENST00000402554 DENND4BO75064 1496 aaPredicted RBP19.81■□□□□ 0.76
NDEL1-203ENST00000402554 SUPT6HQ7KZ85 1726 aaKnown RBP19.81■□□□□ 0.76
NDEL1-203ENST00000402554 GPATCH8Q9UKJ3 1502 aaKnown RBP19.8■□□□□ 0.76
NDEL1-203ENST00000402554 EFCAB2Q5VUJ9 269 aa19.8■□□□□ 0.76
NDEL1-203ENST00000402554 SCAPERQ9BY12 1400 aa19.8■□□□□ 0.76
NDEL1-203ENST00000402554 NCOA2Q15596 1464 aa19.78■□□□□ 0.76
NDEL1-203ENST00000402554 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
NDEL1-203ENST00000402554 ZEB1P37275 1124 aaPredicted RBP19.77■□□□□ 0.76
NDEL1-203ENST00000402554 CCNB3Q8WWL7 1395 aa19.77■□□□□ 0.76
NDEL1-203ENST00000402554 ABCC1P33527 1531 aa19.77■□□□□ 0.76
NDEL1-203ENST00000402554 ITSN2Q9NZM3 1697 aa19.77■□□□□ 0.76
NDEL1-203ENST00000402554 POGZQ7Z3K3 1410 aa19.76■□□□□ 0.75
NDEL1-203ENST00000402554 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
NDEL1-203ENST00000402554 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
NDEL1-203ENST00000402554 ZNF777Q9ULD5 760 aaPredicted RBP19.75■□□□□ 0.75
NDEL1-203ENST00000402554 ZMYM4Q5VZL5 1548 aa19.74■□□□□ 0.75
NDEL1-203ENST00000402554 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
NDEL1-203ENST00000402554 SYCP2Q9BX26 1530 aa19.72■□□□□ 0.75
NDEL1-203ENST00000402554 YEATS2Q9ULM3 1422 aa19.7■□□□□ 0.74
NDEL1-203ENST00000402554 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
NDEL1-203ENST00000402554 TRAPPC8Q9Y2L5 1435 aa19.69■□□□□ 0.74
NDEL1-203ENST00000402554 ZFYVE16Q7Z3T8 1539 aa19.69■□□□□ 0.74
NDEL1-203ENST00000402554 ZNF518AQ6AHZ1 1483 aa19.69■□□□□ 0.74
NDEL1-203ENST00000402554 KDM5CP41229 1560 aa19.69■□□□□ 0.74
NDEL1-203ENST00000402554 AFAP1Q8N556 730 aa19.68■□□□□ 0.74
NDEL1-203ENST00000402554 CCER1Q8TC90 406 aaPredicted RBP19.67■□□□□ 0.74
NDEL1-203ENST00000402554 SIGLEC1Q9BZZ2 1709 aa19.67■□□□□ 0.74
NDEL1-203ENST00000402554 ZNF644Q9H582 1327 aaPredicted RBP19.67■□□□□ 0.74
NDEL1-203ENST00000402554 HECW2Q9P2P5 1572 aa19.66■□□□□ 0.74
NDEL1-203ENST00000402554 KDM4FA0A1W2PPD8 638 aa19.65■□□□□ 0.74
NDEL1-203ENST00000402554 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.746e-7■■■■□ 23.7
NDEL1-203ENST00000402554 ABCA6Q8N139 1617 aa19.63■□□□□ 0.73
NDEL1-203ENST00000402554 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
NDEL1-203ENST00000402554 MAGI2Q86UL8 1455 aa19.62■□□□□ 0.73
NDEL1-203ENST00000402554 PLEKHH2Q8IVE3 1493 aa19.61■□□□□ 0.73
NDEL1-203ENST00000402554 KIDINS220Q9ULH0 1771 aa19.61■□□□□ 0.73
NDEL1-203ENST00000402554 MYT1LQ9UL68 1186 aa19.6■□□□□ 0.73
NDEL1-203ENST00000402554 DIP2CQ9Y2E4 1556 aa19.6■□□□□ 0.73
NDEL1-203ENST00000402554 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
NDEL1-203ENST00000402554 KIAA1107Q9UPP5 1409 aa19.59■□□□□ 0.73
NDEL1-203ENST00000402554 MBD5Q9P267 1494 aa19.57■□□□□ 0.72
NDEL1-203ENST00000402554 MLH3Q9UHC1 1453 aa19.57■□□□□ 0.72
NDEL1-203ENST00000402554 BCORL1Q5H9F3 1711 aa19.57■□□□□ 0.72
NDEL1-203ENST00000402554 ARID4BQ4LE39 1312 aaPredicted RBP19.56■□□□□ 0.72
NDEL1-203ENST00000402554 INO80Q9ULG1 1556 aaPredicted RBP19.56■□□□□ 0.72
NDEL1-203ENST00000402554 ATP10AO60312 1499 aa19.55■□□□□ 0.72
NDEL1-203ENST00000402554 AEBP2Q6ZN18 517 aaPredicted RBP19.55■□□□□ 0.72
NDEL1-203ENST00000402554 ATP7AQ04656 1500 aa19.55■□□□□ 0.72
NDEL1-203ENST00000402554 C9orf84Q5VXU9 1444 aa19.54■□□□□ 0.72
NDEL1-203ENST00000402554 PTPN23Q9H3S7 1636 aa19.53■□□□□ 0.72
NDEL1-203ENST00000402554 SPAG9O60271 1321 aaKnown RBP19.53■□□□□ 0.72
NDEL1-203ENST00000402554 ADAMTSL3P82987 1691 aa19.52■□□□□ 0.72
NDEL1-203ENST00000402554 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
NDEL1-203ENST00000402554 FGD6Q6ZV73 1430 aa19.52■□□□□ 0.72
NDEL1-203ENST00000402554 MADDQ8WXG6 1647 aa19.52■□□□□ 0.71
NDEL1-203ENST00000402554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.714e-9■■■■■ 44.3
NDEL1-203ENST00000402554 CCDC141Q6ZP82 1450 aa19.51■□□□□ 0.71
NDEL1-203ENST00000402554 ITGAEP38570 1179 aa19.51■□□□□ 0.71
NDEL1-203ENST00000402554 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
NDEL1-203ENST00000402554 ARHGEF5Q12774 1597 aa19.5■□□□□ 0.71
NDEL1-203ENST00000402554 MLECQ14165 292 aa19.48■□□□□ 0.71
NDEL1-203ENST00000402554 REREQ9P2R6 1566 aa19.48■□□□□ 0.71
NDEL1-203ENST00000402554 RIMS1Q86UR5 1692 aaKnown RBP19.47■□□□□ 0.71
NDEL1-203ENST00000402554 ADGBQ8N7X0 1667 aa19.47■□□□□ 0.71
NDEL1-203ENST00000402554 FER1L4A9Z1Z3 1794 aa19.46■□□□□ 0.7
NDEL1-203ENST00000402554 CROCC2H7BZ55 1655 aa19.45■□□□□ 0.7
NDEL1-203ENST00000402554 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
NDEL1-203ENST00000402554 PLXNC1O60486 1568 aa19.43■□□□□ 0.7
NDEL1-203ENST00000402554 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
NDEL1-203ENST00000402554 A2MP01023 1474 aa19.41■□□□□ 0.7
NDEL1-203ENST00000402554 RTEL1-TNFRSF6BF6WH68 1400 aa19.41■□□□□ 0.7
NDEL1-203ENST00000402554 MAST1Q9Y2H9 1570 aa19.4■□□□□ 0.7
NDEL1-203ENST00000402554 AGLP35573 1532 aa19.4■□□□□ 0.7
NDEL1-203ENST00000402554 PTPRMP28827 1452 aa19.39■□□□□ 0.69
NDEL1-203ENST00000402554 ABCC5O15440 1437 aa19.38■□□□□ 0.69
NDEL1-203ENST00000402554 DAPK1P53355 1430 aa19.38■□□□□ 0.69
NDEL1-203ENST00000402554 RSPH4AQ5TD94 716 aa19.37■□□□□ 0.69
NDEL1-203ENST00000402554 SETD5Q9C0A6 1442 aa19.37■□□□□ 0.69
NDEL1-203ENST00000402554 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
NDEL1-203ENST00000402554 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
NDEL1-203ENST00000402554 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
NDEL1-203ENST00000402554 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
NDEL1-203ENST00000402554 RAB3GAP2Q9H2M9 1393 aa19.35■□□□□ 0.69
NDEL1-203ENST00000402554 SHANK2Q9UPX8 1470 aa19.33■□□□□ 0.69
NDEL1-203ENST00000402554 CLSPNQ9HAW4 1339 aa19.32■□□□□ 0.68
NDEL1-203ENST00000402554 DHX29Q7Z478 1369 aaKnown RBP19.31■□□□□ 0.68
NDEL1-203ENST00000402554 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
NDEL1-203ENST00000402554 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
NDEL1-203ENST00000402554 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
NDEL1-203ENST00000402554 C3P01024 1663 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms