RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 C14orf37Q86TY3 774 aa4.16□□□□□ -1.74
PHF3-202ENST00000393387 NEFHP12036 1026 aa4.16□□□□□ -1.74
PHF3-202ENST00000393387 PLCD3Q8N3E9 789 aa4.16□□□□□ -1.74
PHF3-202ENST00000393387 BCCIPQ9P287 314 aaKnown RBP eCLIP4.16□□□□□ -1.74
PHF3-202ENST00000393387 RDXP35241 583 aaKnown RBP4.15□□□□□ -1.74
PHF3-202ENST00000393387 NOM1Q5C9Z4 860 aaKnown RBP4.15□□□□□ -1.74
PHF3-202ENST00000393387 FRAT1Q92837 279 aaPredicted RBP4.15□□□□□ -1.74
PHF3-202ENST00000393387 ERICH4A6NGS2 130 aa4.15□□□□□ -1.75
PHF3-202ENST00000393387 PPP4R2Q9NY27 417 aa4.14□□□□□ -1.75
PHF3-202ENST00000393387 R3HCC1Q9Y3T6 440 aaKnown RBP4.14□□□□□ -1.75
PHF3-202ENST00000393387 H0YHG0 523 aa4.14□□□□□ -1.75
PHF3-202ENST00000393387 HOXD11P31277 338 aaPredicted RBP4.14□□□□□ -1.75
PHF3-202ENST00000393387 KCNJ4P48050 445 aa4.14□□□□□ -1.75
PHF3-202ENST00000393387 TRERF1Q96PN7 1200 aa4.14□□□□□ -1.75
PHF3-202ENST00000393387 FOXD4L6Q3SYB3 417 aaPredicted RBP4.14□□□□□ -1.75
PHF3-202ENST00000393387 FOXD4L3Q6VB84 417 aaPredicted RBP4.14□□□□□ -1.75
PHF3-202ENST00000393387 FTSJ3Q8IY81 847 aaKnown RBP4.14□□□□□ -1.75
PHF3-202ENST00000393387 NEUROD2Q15784 382 aa4.14□□□□□ -1.75
PHF3-202ENST00000393387 TEX35Q5T0J7 233 aa4.14□□□□□ -1.75
PHF3-202ENST00000393387 TICAM2Q86XR7 235 aa4.14□□□□□ -1.75
PHF3-202ENST00000393387 ISY1Q9ULR0 285 aaKnown RBP4.13□□□□□ -1.75
PHF3-202ENST00000393387 APBB1O00213 710 aa4.13□□□□□ -1.75
PHF3-202ENST00000393387 RSPH4AQ5TD94 716 aa4.13□□□□□ -1.75
PHF3-202ENST00000393387 CHGAP10645 457 aaKnown RBP4.13□□□□□ -1.75
PHF3-202ENST00000393387 CLGNO14967 610 aa4.12□□□□□ -1.75
PHF3-202ENST00000393387 IPO4Q8TEX9 1081 aaKnown RBP4.12□□□□□ -1.75
PHF3-202ENST00000393387 HTATSF1O43719 755 aaKnown RBP4.12□□□□□ -1.75
PHF3-202ENST00000393387 BRPF3Q9ULD4 1205 aa4.12□□□□□ -1.75
PHF3-202ENST00000393387 GBP4Q96PP9 640 aa4.12□□□□□ -1.75
PHF3-202ENST00000393387 FBXW7Q969H0 707 aa4.12□□□□□ -1.75
PHF3-202ENST00000393387 PES1O00541 588 aaKnown RBP4.11□□□□□ -1.75
PHF3-202ENST00000393387 BBXQ8WY36 941 aaPredicted RBP4.11□□□□□ -1.75
PHF3-202ENST00000393387 ZHX1Q9UKY1 873 aaPredicted RBP4.11□□□□□ -1.75
PHF3-202ENST00000393387 GSE1Q14687 1217 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 OS9Q13438 667 aaPredicted RBP4.11□□□□□ -1.75
PHF3-202ENST00000393387 MFAP1P55081 439 aaKnown RBP4.11□□□□□ -1.75
PHF3-202ENST00000393387 TTLL5Q6EMB2 1281 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 DYDC1Q8WWB3 177 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 TPM3P06753 285 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 CCDC191Q8NCU4 936 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 ZFP91Q96JP5 570 aaPredicted RBP4.11□□□□□ -1.75
PHF3-202ENST00000393387 TONSLQ96HA7 1378 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 NPHP1O15259 732 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 GPS2Q13227 327 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 GORABQ5T7V8 394 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 CENPHQ9H3R5 247 aa4.11□□□□□ -1.75
PHF3-202ENST00000393387 CCAR1Q8IX12 1150 aaKnown RBP4.1□□□□□ -1.75
PHF3-202ENST00000393387 TSPYL1Q9H0U9 437 aa4.1□□□□□ -1.75
PHF3-202ENST00000393387 KDM2AQ9Y2K7 1162 aa4.1□□□□□ -1.75
PHF3-202ENST00000393387 TPM4P67936 248 aa4.1□□□□□ -1.75
PHF3-202ENST00000393387 GIMAP7Q8NHV1 300 aa4.1□□□□□ -1.75
PHF3-202ENST00000393387 IPO9Q96P70 1041 aaKnown RBP4.1□□□□□ -1.75
PHF3-202ENST00000393387 CC2D1BQ5T0F9 858 aaKnown RBP4.1□□□□□ -1.75
PHF3-202ENST00000393387 SRRTQ9BXP5 876 aaKnown RBP4.1□□□□□ -1.75
PHF3-202ENST00000393387 ZNF777Q9ULD5 760 aaPredicted RBP4.1□□□□□ -1.75
PHF3-202ENST00000393387 PDIA4P13667 645 aaKnown RBP4.09□□□□□ -1.75
PHF3-202ENST00000393387 CCDC66A2RUB6 948 aa4.09□□□□□ -1.75
PHF3-202ENST00000393387 CALD1Q05682 793 aaKnown RBP4.09□□□□□ -1.76
PHF3-202ENST00000393387 TAF3Q5VWG9 929 aa4.09□□□□□ -1.76
PHF3-202ENST00000393387 FAM43AQ8N2R8 423 aa4.09□□□□□ -1.76
PHF3-202ENST00000393387 CWC15Q9P013 229 aaKnown RBP4.08□□□□□ -1.76
PHF3-202ENST00000393387 U2SURPO15042 1029 aaKnown RBP4.08□□□□□ -1.76
PHF3-202ENST00000393387 P3H3Q8IVL6 736 aa4.08□□□□□ -1.76
PHF3-202ENST00000393387 ZMYND15Q9H091 742 aa4.08□□□□□ -1.76
PHF3-202ENST00000393387 HOMER1Q86YM7 354 aa4.08□□□□□ -1.76
PHF3-202ENST00000393387 SYAP1Q96A49 352 aaPredicted RBP4.08□□□□□ -1.76
PHF3-202ENST00000393387 RUFY1Q96T51 708 aa4.08□□□□□ -1.76
PHF3-202ENST00000393387 CGNQ9P2M7 1197 aaKnown RBP4.08□□□□□ -1.76
PHF3-202ENST00000393387 CHMP3Q9Y3E7 222 aa4.08□□□□□ -1.76
PHF3-202ENST00000393387 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.07□□□□□ -1.76
PHF3-202ENST00000393387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.07□□□□□ -1.76
PHF3-202ENST00000393387 AK7Q96M32 723 aa4.07□□□□□ -1.76
PHF3-202ENST00000393387 CEP89Q96ST8 783 aa4.07□□□□□ -1.76
PHF3-202ENST00000393387 CFAP44Q96MT7 982 aa4.07□□□□□ -1.76
PHF3-202ENST00000393387 IRX3P78415 501 aaPredicted RBP4.07□□□□□ -1.76
PHF3-202ENST00000393387 CBX1P83916 185 aa4.07□□□□□ -1.76
PHF3-202ENST00000393387 LEKR1Q6ZMV7 388 aa4.07□□□□□ -1.76
PHF3-202ENST00000393387 MPNDQ8N594 471 aa4.07□□□□□ -1.76
PHF3-202ENST00000393387 RASSF8Q8NHQ8 419 aa4.07□□□□□ -1.76
PHF3-202ENST00000393387 UBE2Q2Q8WVN8 375 aa4.06□□□□□ -1.76
PHF3-202ENST00000393387 CHMP4BQ9H444 224 aaKnown RBP4.06□□□□□ -1.76
PHF3-202ENST00000393387 IFT57Q9NWB7 429 aa4.06□□□□□ -1.76
PHF3-202ENST00000393387 MCCP23508 829 aa4.06□□□□□ -1.76
PHF3-202ENST00000393387 VGLL3A8MV65 326 aa4.06□□□□□ -1.76
PHF3-202ENST00000393387 HMMRO75330 724 aa4.06□□□□□ -1.76
PHF3-202ENST00000393387 FAM193AP78312 1265 aa4.06□□□□□ -1.76
PHF3-202ENST00000393387 CLASRPQ8N2M8 674 aaKnown RBP4.06□□□□□ -1.76
PHF3-202ENST00000393387 DEF6Q9H4E7 631 aa4.06□□□□□ -1.76
PHF3-202ENST00000393387 CCDC70Q6NSX1 233 aa4.05□□□□□ -1.76
PHF3-202ENST00000393387 MNS1Q8NEH6 495 aa4.05□□□□□ -1.76
PHF3-202ENST00000393387 LMOD3Q0VAK6 560 aa4.05□□□□□ -1.76
PHF3-202ENST00000393387 TPD52L1Q16890 204 aaPredicted RBP4.05□□□□□ -1.76
PHF3-202ENST00000393387 PCMTD1Q96MG8 357 aaPredicted RBP4.05□□□□□ -1.76
PHF3-202ENST00000393387 DDX49Q9Y6V7 483 aaKnown RBP4.05□□□□□ -1.76
PHF3-202ENST00000393387 AXDND1Q5T1B0 1012 aaPredicted RBP4.05□□□□□ -1.76
PHF3-202ENST00000393387 UQCRHLA0A096LP55 91 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 UQCRHP07919 91 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 NAP1L1P55209 391 aaKnown RBP4.04□□□□□ -1.76
PHF3-202ENST00000393387 HSP90B2PQ58FF3 399 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 VGFO15240 615 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms