RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
RNU6-339P-201ENST00000384310 GOLGA2Q08379 1002 aa6.94□□□□□ -1.3
RNU6-339P-201ENST00000384310 KIF12Q96FN5 646 aa6.94□□□□□ -1.3
RNU6-339P-201ENST00000384310 PPP1R15BQ5SWA1 713 aa6.93□□□□□ -1.3
RNU6-339P-201ENST00000384310 ZNF316A6NFI3 1004 aaPredicted RBP6.92□□□□□ -1.3
RNU6-339P-201ENST00000384310 PRKAR2AP13861 404 aaKnown RBP6.92□□□□□ -1.3
RNU6-339P-201ENST00000384310 MKRN3Q13064 507 aaKnown RBP6.92□□□□□ -1.3
RNU6-339P-201ENST00000384310 DPYSL4O14531 572 aa6.91□□□□□ -1.3
RNU6-339P-201ENST00000384310 FAM117AQ9C073 453 aa6.91□□□□□ -1.3
RNU6-339P-201ENST00000384310 SPDYE16A6NNV3 312 aaPredicted RBP6.9□□□□□ -1.3
RNU6-339P-201ENST00000384310 DDRGK1Q96HY6 314 aa6.9□□□□□ -1.3
RNU6-339P-201ENST00000384310 C1orf115Q9H7X2 142 aa6.9□□□□□ -1.3
RNU6-339P-201ENST00000384310 FLIIQ13045 1269 aa6.89□□□□□ -1.31
RNU6-339P-201ENST00000384310 PDIA6Q15084 440 aa6.89□□□□□ -1.31
RNU6-339P-201ENST00000384310 ARID3CA6NKF2 412 aa6.88□□□□□ -1.31
RNU6-339P-201ENST00000384310 GPR37O15354 613 aa6.88□□□□□ -1.31
RNU6-339P-201ENST00000384310 APBB1O00213 710 aa6.87□□□□□ -1.31
RNU6-339P-201ENST00000384310 CCDC102AQ96A19 550 aa6.87□□□□□ -1.31
RNU6-339P-201ENST00000384310 TMEM106CQ9BVX2 250 aa6.87□□□□□ -1.31
RNU6-339P-201ENST00000384310 GPHNQ9NQX3 736 aaPredicted RBP6.87□□□□□ -1.31
RNU6-339P-201ENST00000384310 MINK1Q8N4C8 1332 aaPredicted RBP6.86□□□□□ -1.31
RNU6-339P-201ENST00000384310 PLEKHG3A1L390 1219 aa6.86□□□□□ -1.31
RNU6-339P-201ENST00000384310 MAP2K5Q13163 448 aa6.86□□□□□ -1.31
RNU6-339P-201ENST00000384310 NPM2Q86SE8 214 aaKnown RBP6.86□□□□□ -1.31
RNU6-339P-201ENST00000384310 HRCP23327 699 aa6.85□□□□□ -1.31
RNU6-339P-201ENST00000384310 EMILIN3Q9NT22 766 aa6.85□□□□□ -1.31
RNU6-339P-201ENST00000384310 NUTM2FA1L443 756 aa6.84□□□□□ -1.31
RNU6-339P-201ENST00000384310 AMHR2Q16671 573 aa6.84□□□□□ -1.31
RNU6-339P-201ENST00000384310 PARP9Q8IXQ6 854 aa6.84□□□□□ -1.31
RNU6-339P-201ENST00000384310 PDIA4P13667 645 aaKnown RBP6.82□□□□□ -1.32
RNU6-339P-201ENST00000384310 DSG2Q14126 1118 aa6.82□□□□□ -1.32
RNU6-339P-201ENST00000384310 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
RNU6-339P-201ENST00000384310 PHF12Q96QT6 1004 aa6.82□□□□□ -1.32
RNU6-339P-201ENST00000384310 ZRANB1Q9UGI0 708 aa6.82□□□□□ -1.32
RNU6-339P-201ENST00000384310 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
RNU6-339P-201ENST00000384310 GRXCR2A6NFK2 248 aa6.81□□□□□ -1.32
RNU6-339P-201ENST00000384310 IRF6O14896 467 aa6.81□□□□□ -1.32
RNU6-339P-201ENST00000384310 TMC2Q8TDI7 906 aa6.81□□□□□ -1.32
RNU6-339P-201ENST00000384310 GNPATO15228 680 aa6.79□□□□□ -1.32
RNU6-339P-201ENST00000384310 FXR2P51116 673 aaKnown RBP eCLIP6.79□□□□□ -1.32
RNU6-339P-201ENST00000384310 CCDC82Q8N4S0 544 aa6.79□□□□□ -1.32
RNU6-339P-201ENST00000384310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.79□□□□□ -1.32
RNU6-339P-201ENST00000384310 A6NJR5 290 aa6.78□□□□□ -1.32
RNU6-339P-201ENST00000384310 ONECUT3O60422 494 aaPredicted RBP6.78□□□□□ -1.32
RNU6-339P-201ENST00000384310 PCMTD1Q96MG8 357 aaPredicted RBP6.78□□□□□ -1.32
RNU6-339P-201ENST00000384310 GOPCQ9HD26 462 aa6.78□□□□□ -1.32
RNU6-339P-201ENST00000384310 FCHSD2O94868 740 aa6.77□□□□□ -1.33
RNU6-339P-201ENST00000384310 CD44P16070 742 aaKnown RBP6.77□□□□□ -1.33
RNU6-339P-201ENST00000384310 FOXK1P85037 733 aa6.77□□□□□ -1.33
RNU6-339P-201ENST00000384310 HIC1Q14526 733 aa6.77□□□□□ -1.33
RNU6-339P-201ENST00000384310 CLUAP1Q96AJ1 413 aa6.77□□□□□ -1.33
RNU6-339P-201ENST00000384310 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
RNU6-339P-201ENST00000384310 TRAK2O60296 914 aa6.76□□□□□ -1.33
RNU6-339P-201ENST00000384310 TRPC6Q9Y210 931 aa6.76□□□□□ -1.33
RNU6-339P-201ENST00000384310 MAP3K9P80192 1104 aa6.75□□□□□ -1.33
RNU6-339P-201ENST00000384310 GIGYF2Q6Y7W6 1299 aaKnown RBP6.75□□□□□ -1.33
RNU6-339P-201ENST00000384310 PLPP6Q8IY26 295 aa6.75□□□□□ -1.33
RNU6-339P-201ENST00000384310 MICALL2Q8IY33 904 aa6.75□□□□□ -1.33
RNU6-339P-201ENST00000384310 MS4A3Q96HJ5 214 aa6.75□□□□□ -1.33
RNU6-339P-201ENST00000384310 FECHP22830 423 aa6.74□□□□□ -1.33
RNU6-339P-201ENST00000384310 MCM6Q14566 821 aa6.74□□□□□ -1.33
RNU6-339P-201ENST00000384310 ILDR1Q86SU0 546 aaPredicted RBP6.74□□□□□ -1.33
RNU6-339P-201ENST00000384310 OSBPP22059 807 aa6.73□□□□□ -1.33
RNU6-339P-201ENST00000384310 MS4A1P11836 297 aa6.72□□□□□ -1.33
RNU6-339P-201ENST00000384310 SH3D19Q5HYK7 790 aa6.72□□□□□ -1.33
RNU6-339P-201ENST00000384310 TTLL13PA6NNM8 815 aa6.71□□□□□ -1.34
RNU6-339P-201ENST00000384310 TIE1P35590 1138 aa6.71□□□□□ -1.34
RNU6-339P-201ENST00000384310 PROSER2Q86WR7 435 aaPredicted RBP6.71□□□□□ -1.34
RNU6-339P-201ENST00000384310 DDX12PQ92771 950 aa6.71□□□□□ -1.34
RNU6-339P-201ENST00000384310 UPF1Q92900 1129 aaKnown RBP eCLIP6.71□□□□□ -1.34
RNU6-339P-201ENST00000384310 C2orf72A6NCS6 295 aa6.7□□□□□ -1.34
RNU6-339P-201ENST00000384310 DPY19L2Q6NUT2 758 aa6.7□□□□□ -1.34
RNU6-339P-201ENST00000384310 PIP4P2Q8N4L2 257 aa6.7□□□□□ -1.34
RNU6-339P-201ENST00000384310 CCDC97Q96F63 343 aaPredicted RBP6.7□□□□□ -1.34
RNU6-339P-201ENST00000384310 NECTIN2Q92692 538 aa6.69□□□□□ -1.34
RNU6-339P-201ENST00000384310 ATP1B4Q9UN42 357 aaPredicted RBP6.69□□□□□ -1.34
RNU6-339P-201ENST00000384310 G3V3G9 751 aa6.68□□□□□ -1.34
RNU6-339P-201ENST00000384310 RAD21O60216 631 aa6.68□□□□□ -1.34
RNU6-339P-201ENST00000384310 PTGDRQ13258 359 aa6.68□□□□□ -1.34
RNU6-339P-201ENST00000384310 CLCN1P35523 988 aa6.67□□□□□ -1.34
RNU6-339P-201ENST00000384310 PTGER2P43116 358 aa6.67□□□□□ -1.34
RNU6-339P-201ENST00000384310 BMP2KQ9NSY1 1161 aaPredicted RBP6.67□□□□□ -1.34
RNU6-339P-201ENST00000384310 SERPINA10Q9UK55 444 aa6.67□□□□□ -1.34
RNU6-339P-201ENST00000384310 ZNF777Q9ULD5 760 aaPredicted RBP6.67□□□□□ -1.34
RNU6-339P-201ENST00000384310 TRIM35Q9UPQ4 493 aa6.67□□□□□ -1.34
RNU6-339P-201ENST00000384310 KIF3CO14782 793 aa6.66□□□□□ -1.34
RNU6-339P-201ENST00000384310 CHRDL2Q6WN34 429 aa6.66□□□□□ -1.34
RNU6-339P-201ENST00000384310 REPIN1Q9BWE0 567 aaKnown RBP6.66□□□□□ -1.34
RNU6-339P-201ENST00000384310 PRIM1P49642 420 aaKnown RBP6.65□□□□□ -1.34
RNU6-339P-201ENST00000384310 MDM2Q00987 491 aaPredicted RBP6.65□□□□□ -1.34
RNU6-339P-201ENST00000384310 KCTD17Q8N5Z5 321 aa6.65□□□□□ -1.34
RNU6-339P-201ENST00000384310 POM121Q96HA1 1249 aa6.65□□□□□ -1.34
RNU6-339P-201ENST00000384310 GPCPD1Q9NPB8 672 aa6.65□□□□□ -1.34
RNU6-339P-201ENST00000384310 BOLA1Q9Y3E2 137 aa6.65□□□□□ -1.34
RNU6-339P-201ENST00000384310 TBC1D12O60347 775 aa6.64□□□□□ -1.35
RNU6-339P-201ENST00000384310 SKIV2LQ15477 1246 aaKnown RBP6.64□□□□□ -1.35
RNU6-339P-201ENST00000384310 PDCD7Q8N8D1 485 aaKnown RBP6.64□□□□□ -1.35
RNU6-339P-201ENST00000384310 OXER1Q8TDS5 423 aa6.64□□□□□ -1.35
RNU6-339P-201ENST00000384310 TRAIPQ9BWF2 469 aa6.64□□□□□ -1.35
RNU6-339P-201ENST00000384310 EVI5O60447 810 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms