RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 NECTIN2Q92692 538 aa5.45□□□□□ -1.54
TMEM38B-201ENST00000374688 GSE1Q14687 1217 aa5.45□□□□□ -1.54
TMEM38B-201ENST00000374688 ZNF428Q96B54 188 aa5.45□□□□□ -1.54
TMEM38B-201ENST00000374688 CHMP4BQ9H444 224 aaKnown RBP5.45□□□□□ -1.54
TMEM38B-201ENST00000374688 RBM19Q9Y4C8 960 aaKnown RBP5.45□□□□□ -1.54
TMEM38B-201ENST00000374688 NPM1P06748 294 aaKnown RBP eCLIP5.44□□□□□ -1.54
TMEM38B-201ENST00000374688 TEX2Q8IWB9 1127 aa5.44□□□□□ -1.54
TMEM38B-201ENST00000374688 KCTD17Q8N5Z5 321 aa5.44□□□□□ -1.54
TMEM38B-201ENST00000374688 IPO4Q8TEX9 1081 aaKnown RBP5.44□□□□□ -1.54
TMEM38B-201ENST00000374688 PTMAP06454 111 aaKnown RBP5.43□□□□□ -1.54
TMEM38B-201ENST00000374688 BBXQ8WY36 941 aaPredicted RBP5.43□□□□□ -1.54
TMEM38B-201ENST00000374688 SECISBP2LQ93073 1101 aaKnown RBP5.43□□□□□ -1.54
TMEM38B-201ENST00000374688 IL27Q8NEV9 243 aa5.42□□□□□ -1.54
TMEM38B-201ENST00000374688 PATL2C9JE40 543 aaKnown RBP5.42□□□□□ -1.54
TMEM38B-201ENST00000374688 CCDC180Q9P1Z9 1646 aa5.41□□□□□ -1.54
TMEM38B-201ENST00000374688 DCAF1Q9Y4B6 1507 aa5.41□□□□□ -1.54
TMEM38B-201ENST00000374688 OS9Q13438 667 aaPredicted RBP5.41□□□□□ -1.54
TMEM38B-201ENST00000374688 HS6ST3Q8IZP7 471 aa5.41□□□□□ -1.54
TMEM38B-201ENST00000374688 CNGB1Q14028 1251 aaPredicted RBP5.41□□□□□ -1.54
TMEM38B-201ENST00000374688 FTSJ3Q8IY81 847 aaKnown RBP5.41□□□□□ -1.54
TMEM38B-201ENST00000374688 MYO15BQ96JP2 1530 aa5.41□□□□□ -1.54
TMEM38B-201ENST00000374688 PITPNM1O00562 1244 aa5.4□□□□□ -1.54
TMEM38B-201ENST00000374688 CANXP27824 592 aaKnown RBP5.4□□□□□ -1.54
TMEM38B-201ENST00000374688 FOXD4L5Q5VV16 416 aaPredicted RBP5.4□□□□□ -1.54
TMEM38B-201ENST00000374688 FOXD4L4Q8WXT5 416 aaPredicted RBP5.4□□□□□ -1.54
TMEM38B-201ENST00000374688 NEFMP07197 916 aa5.4□□□□□ -1.55
TMEM38B-201ENST00000374688 FAM177A1Q8N128 213 aaPredicted RBP5.39□□□□□ -1.55
TMEM38B-201ENST00000374688 PRDM16Q9HAZ2 1276 aa5.39□□□□□ -1.55
TMEM38B-201ENST00000374688 SETQ01105 290 aaPredicted RBP5.39□□□□□ -1.55
TMEM38B-201ENST00000374688 ANAPC15P60006 121 aa5.39□□□□□ -1.55
TMEM38B-201ENST00000374688 MTMR7Q9Y216 660 aa5.38□□□□□ -1.55
TMEM38B-201ENST00000374688 FAM193AP78312 1265 aa5.37□□□□□ -1.55
TMEM38B-201ENST00000374688 GPATCH11Q8N954 259 aa5.37□□□□□ -1.55
TMEM38B-201ENST00000374688 ARID3CA6NKF2 412 aa5.37□□□□□ -1.55
TMEM38B-201ENST00000374688 CC2D2BQ6DHV5 1058 aa5.37□□□□□ -1.55
TMEM38B-201ENST00000374688 MCCP23508 829 aa5.36□□□□□ -1.55
TMEM38B-201ENST00000374688 CCDC27Q2M243 656 aa5.36□□□□□ -1.55
TMEM38B-201ENST00000374688 AEBP1Q8IUX7 1158 aa5.35□□□□□ -1.55
TMEM38B-201ENST00000374688 KDM4AO75164 1064 aa5.35□□□□□ -1.55
TMEM38B-201ENST00000374688 FAM43BQ6ZT52 329 aaPredicted RBP5.35□□□□□ -1.55
TMEM38B-201ENST00000374688 ZNF579Q8NAF0 562 aaKnown RBP5.35□□□□□ -1.55
TMEM38B-201ENST00000374688 FANCIQ9NVI1 1328 aa5.35□□□□□ -1.55
TMEM38B-201ENST00000374688 C19orf67A6NJJ6 358 aa5.34□□□□□ -1.55
TMEM38B-201ENST00000374688 FAM50AQ14320 339 aaKnown RBP5.34□□□□□ -1.55
TMEM38B-201ENST00000374688 FAM9BQ8IZU0 186 aa5.33□□□□□ -1.56
TMEM38B-201ENST00000374688 DNAJC2Q99543 621 aaKnown RBP5.33□□□□□ -1.56
TMEM38B-201ENST00000374688 GRIPAP1Q4V328 841 aa5.32□□□□□ -1.56
TMEM38B-201ENST00000374688 ARIH1Q9Y4X5 557 aaPredicted RBP5.32□□□□□ -1.56
TMEM38B-201ENST00000374688 CCDC61Q9Y6R9 512 aa5.32□□□□□ -1.56
TMEM38B-201ENST00000374688 C1orf115Q9H7X2 142 aa5.31□□□□□ -1.56
TMEM38B-201ENST00000374688 HSP90AA2PQ14568 343 aaPredicted RBP5.31□□□□□ -1.56
TMEM38B-201ENST00000374688 KCNG1Q9UIX4 513 aa5.31□□□□□ -1.56
TMEM38B-201ENST00000374688 CLGNO14967 610 aa5.31□□□□□ -1.56
TMEM38B-201ENST00000374688 APPP05067 770 aa5.31□□□□□ -1.56
TMEM38B-201ENST00000374688 ZNF316A6NFI3 1004 aaPredicted RBP5.3□□□□□ -1.56
TMEM38B-201ENST00000374688 MIER1Q8N108 512 aa5.3□□□□□ -1.56
TMEM38B-201ENST00000374688 E9PSI1 815 aa5.3□□□□□ -1.56
TMEM38B-201ENST00000374688 APBB1O00213 710 aa5.3□□□□□ -1.56
TMEM38B-201ENST00000374688 NEUROD2Q15784 382 aa5.3□□□□□ -1.56
TMEM38B-201ENST00000374688 TMCO4Q5TGY1 634 aa5.3□□□□□ -1.56
TMEM38B-201ENST00000374688 BRPF1P55201 1214 aaPredicted RBP5.29□□□□□ -1.56
TMEM38B-201ENST00000374688 RNF25Q96BH1 459 aaPredicted RBP5.29□□□□□ -1.56
TMEM38B-201ENST00000374688 FARP1Q9Y4F1 1045 aaPredicted RBP5.29□□□□□ -1.56
TMEM38B-201ENST00000374688 VGFO15240 615 aaPredicted RBP5.28□□□□□ -1.56
TMEM38B-201ENST00000374688 RIOK3O14730 519 aaKnown RBP5.28□□□□□ -1.56
TMEM38B-201ENST00000374688 RGS22Q8NE09 1264 aa5.28□□□□□ -1.56
TMEM38B-201ENST00000374688 PRR29P0C7W0 189 aa5.28□□□□□ -1.56
TMEM38B-201ENST00000374688 PIP4P2Q8N4L2 257 aa5.28□□□□□ -1.56
TMEM38B-201ENST00000374688 GTF2E1P29083 439 aaPredicted RBP5.27□□□□□ -1.57
TMEM38B-201ENST00000374688 PLEKHD1A6NEE1 506 aa5.27□□□□□ -1.57
TMEM38B-201ENST00000374688 MAFGO15525 162 aa5.27□□□□□ -1.57
TMEM38B-201ENST00000374688 HSP90AB4PQ58FF6 505 aa5.27□□□□□ -1.57
TMEM38B-201ENST00000374688 ZNF622Q969S3 477 aaKnown RBP eCLIP5.27□□□□□ -1.57
TMEM38B-201ENST00000374688 RRP9O43818 475 aaKnown RBP5.26□□□□□ -1.57
TMEM38B-201ENST00000374688 NOP58Q9Y2X3 529 aaKnown RBP5.26□□□□□ -1.57
TMEM38B-201ENST00000374688 PHF14O94880 888 aa5.26□□□□□ -1.57
TMEM38B-201ENST00000374688 MFAP1P55081 439 aaKnown RBP5.26□□□□□ -1.57
TMEM38B-201ENST00000374688 PLCD3Q8N3E9 789 aa5.25□□□□□ -1.57
TMEM38B-201ENST00000374688 RASEFQ8IZ41 740 aa5.25□□□□□ -1.57
TMEM38B-201ENST00000374688 SPRYD3Q8NCJ5 442 aa5.25□□□□□ -1.57
TMEM38B-201ENST00000374688 NOL8Q76FK4 1167 aaKnown RBP5.25□□□□□ -1.57
TMEM38B-201ENST00000374688 HSP90AA1P07900 732 aaKnown RBP5.24□□□□□ -1.57
TMEM38B-201ENST00000374688 STAC3Q96MF2 364 aa5.24□□□□□ -1.57
TMEM38B-201ENST00000374688 RGL2O15211 777 aa5.24□□□□□ -1.57
TMEM38B-201ENST00000374688 LAS1LQ9Y4W2 734 aaKnown RBP5.24□□□□□ -1.57
TMEM38B-201ENST00000374688 ANP32BQ92688 251 aaKnown RBP5.24□□□□□ -1.57
TMEM38B-201ENST00000374688 C11orf95C9JLR9 678 aaPredicted RBP5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 FOXD4L6Q3SYB3 417 aaPredicted RBP5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 FOXD4L3Q6VB84 417 aaPredicted RBP5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 RYDENQ9NUL5 291 aaKnown RBP5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 SOX12O15370 315 aa5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 GZF1Q9H116 711 aaPredicted RBP5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 EXOC8Q8IYI6 725 aa5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 FAM212AQ96EL1 285 aa5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 HDAC5Q9UQL6 1122 aa5.23□□□□□ -1.57
TMEM38B-201ENST00000374688 ITGAEP38570 1179 aa5.22□□□□□ -1.57
TMEM38B-201ENST00000374688 AXDND1Q5T1B0 1012 aaPredicted RBP5.22□□□□□ -1.57
TMEM38B-201ENST00000374688 KIF12Q96FN5 646 aa5.22□□□□□ -1.57
TMEM38B-201ENST00000374688 IRX3P78415 501 aaPredicted RBP5.22□□□□□ -1.57
TMEM38B-201ENST00000374688 TMTC2Q8N394 836 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms