RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 NCKAP5LQ9HCH0 1330 aa6.66□□□□□ -1.34
RNU6-1249P-201ENST00000363237 DDX27Q96GQ7 796 aaKnown RBP6.65□□□□□ -1.34
RNU6-1249P-201ENST00000363237 PHF8Q9UPP1 1060 aa6.65□□□□□ -1.34
RNU6-1249P-201ENST00000363237 CAMK2BQ13554 666 aa6.64□□□□□ -1.35
RNU6-1249P-201ENST00000363237 TRIM66O15016 1216 aa6.63□□□□□ -1.35
RNU6-1249P-201ENST00000363237 PDE4DQ08499 809 aa6.63□□□□□ -1.35
RNU6-1249P-201ENST00000363237 CRISPLD2Q9H0B8 497 aa6.63□□□□□ -1.35
RNU6-1249P-201ENST00000363237 CABP2Q9NPB3 220 aa6.63□□□□□ -1.35
RNU6-1249P-201ENST00000363237 RBM26Q5T8P6 1007 aaKnown RBP6.62□□□□□ -1.35
RNU6-1249P-201ENST00000363237 CCDC61Q9Y6R9 512 aa6.62□□□□□ -1.35
RNU6-1249P-201ENST00000363237 POTEB2H3BUK9 544 aa6.61□□□□□ -1.35
RNU6-1249P-201ENST00000363237 CLCN6P51797 869 aa6.61□□□□□ -1.35
RNU6-1249P-201ENST00000363237 HRCP23327 699 aa6.6□□□□□ -1.35
RNU6-1249P-201ENST00000363237 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
RNU6-1249P-201ENST00000363237 FLIIQ13045 1269 aa6.59□□□□□ -1.35
RNU6-1249P-201ENST00000363237 NPM2Q86SE8 214 aaKnown RBP6.59□□□□□ -1.35
RNU6-1249P-201ENST00000363237 ARID3AQ99856 593 aa6.59□□□□□ -1.35
RNU6-1249P-201ENST00000363237 MLLT3P42568 568 aaPredicted RBP6.58□□□□□ -1.36
RNU6-1249P-201ENST00000363237 MKRN3Q13064 507 aaKnown RBP6.58□□□□□ -1.36
RNU6-1249P-201ENST00000363237 IFNL1Q8IU54 200 aa6.58□□□□□ -1.36
RNU6-1249P-201ENST00000363237 DCBLD2Q96PD2 775 aa6.58□□□□□ -1.36
RNU6-1249P-201ENST00000363237 FARP1Q9Y4F1 1045 aaPredicted RBP6.58□□□□□ -1.36
RNU6-1249P-201ENST00000363237 ZNF316A6NFI3 1004 aaPredicted RBP6.57□□□□□ -1.36
RNU6-1249P-201ENST00000363237 DDRGK1Q96HY6 314 aa6.57□□□□□ -1.36
RNU6-1249P-201ENST00000363237 PAK3O75914 559 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1249P-201ENST00000363237 CHADLQ6NUI6 762 aa6.56□□□□□ -1.36
RNU6-1249P-201ENST00000363237 SPDYE16A6NNV3 312 aaPredicted RBP6.55□□□□□ -1.36
RNU6-1249P-201ENST00000363237 C1orf115Q9H7X2 142 aa6.55□□□□□ -1.36
RNU6-1249P-201ENST00000363237 MINK1Q8N4C8 1332 aaPredicted RBP6.54□□□□□ -1.36
RNU6-1249P-201ENST00000363237 APBB1O00213 710 aa6.54□□□□□ -1.36
RNU6-1249P-201ENST00000363237 MS4A4AQ96JQ5 239 aa6.54□□□□□ -1.36
RNU6-1249P-201ENST00000363237 FAM117AQ9C073 453 aa6.54□□□□□ -1.36
RNU6-1249P-201ENST00000363237 MAP3K13O43283 966 aa6.53□□□□□ -1.36
RNU6-1249P-201ENST00000363237 PDIA4P13667 645 aaKnown RBP6.53□□□□□ -1.36
RNU6-1249P-201ENST00000363237 ZBTB7CA1YPR0 619 aa6.52□□□□□ -1.37
RNU6-1249P-201ENST00000363237 PPP1R15BQ5SWA1 713 aa6.52□□□□□ -1.37
RNU6-1249P-201ENST00000363237 KIF12Q96FN5 646 aa6.52□□□□□ -1.37
RNU6-1249P-201ENST00000363237 GOPCQ9HD26 462 aa6.52□□□□□ -1.37
RNU6-1249P-201ENST00000363237 PDIA6Q15084 440 aa6.51□□□□□ -1.37
RNU6-1249P-201ENST00000363237 GPHNQ9NQX3 736 aaPredicted RBP6.51□□□□□ -1.37
RNU6-1249P-201ENST00000363237 PLEKHG3A1L390 1219 aa6.5□□□□□ -1.37
RNU6-1249P-201ENST00000363237 A6NJR5 290 aa6.5□□□□□ -1.37
RNU6-1249P-201ENST00000363237 ARID3CA6NKF2 412 aa6.5□□□□□ -1.37
RNU6-1249P-201ENST00000363237 GOLGA2Q08379 1002 aa6.5□□□□□ -1.37
RNU6-1249P-201ENST00000363237 AMHR2Q16671 573 aa6.5□□□□□ -1.37
RNU6-1249P-201ENST00000363237 CCDC9Q9Y3X0 531 aaKnown RBP6.5□□□□□ -1.37
RNU6-1249P-201ENST00000363237 GPR37O15354 613 aa6.49□□□□□ -1.37
RNU6-1249P-201ENST00000363237 MAP2K5Q13163 448 aa6.49□□□□□ -1.37
RNU6-1249P-201ENST00000363237 CDAN1Q8IWY9 1227 aa6.49□□□□□ -1.37
RNU6-1249P-201ENST00000363237 DPYSL4O14531 572 aa6.48□□□□□ -1.37
RNU6-1249P-201ENST00000363237 IRF6O14896 467 aa6.48□□□□□ -1.37
RNU6-1249P-201ENST00000363237 FAM163AQ96GL9 167 aaPredicted RBP6.48□□□□□ -1.37
RNU6-1249P-201ENST00000363237 CCDC102AQ96A19 550 aa6.47□□□□□ -1.37
RNU6-1249P-201ENST00000363237 TRAK2O60296 914 aa6.46□□□□□ -1.38
RNU6-1249P-201ENST00000363237 ONECUT3O60422 494 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1249P-201ENST00000363237 MMRN1Q13201 1228 aa6.45□□□□□ -1.38
RNU6-1249P-201ENST00000363237 PARP9Q8IXQ6 854 aa6.45□□□□□ -1.38
RNU6-1249P-201ENST00000363237 EMILIN3Q9NT22 766 aa6.45□□□□□ -1.38
RNU6-1249P-201ENST00000363237 GNPATO15228 680 aa6.44□□□□□ -1.38
RNU6-1249P-201ENST00000363237 PCMTD1Q96MG8 357 aaPredicted RBP6.44□□□□□ -1.38
RNU6-1249P-201ENST00000363237 NUTM2FA1L443 756 aa6.43□□□□□ -1.38
RNU6-1249P-201ENST00000363237 HIC1Q14526 733 aa6.43□□□□□ -1.38
RNU6-1249P-201ENST00000363237 CCDC82Q8N4S0 544 aa6.43□□□□□ -1.38
RNU6-1249P-201ENST00000363237 FCHSD2O94868 740 aa6.41□□□□□ -1.38
RNU6-1249P-201ENST00000363237 CD44P16070 742 aaKnown RBP6.41□□□□□ -1.38
RNU6-1249P-201ENST00000363237 FOXK1P85037 733 aa6.41□□□□□ -1.38
RNU6-1249P-201ENST00000363237 DSG2Q14126 1118 aa6.41□□□□□ -1.38
RNU6-1249P-201ENST00000363237 CLUAP1Q96AJ1 413 aa6.41□□□□□ -1.38
RNU6-1249P-201ENST00000363237 TMEM106CQ9BVX2 250 aa6.41□□□□□ -1.38
RNU6-1249P-201ENST00000363237 GRXCR2A6NFK2 248 aa6.4□□□□□ -1.38
RNU6-1249P-201ENST00000363237 TTLL12Q14166 644 aaPredicted RBP6.4□□□□□ -1.38
RNU6-1249P-201ENST00000363237 ILDR1Q86SU0 546 aaPredicted RBP6.39□□□□□ -1.39
RNU6-1249P-201ENST00000363237 KCTD17Q8N5Z5 321 aa6.39□□□□□ -1.39
RNU6-1249P-201ENST00000363237 TMC2Q8TDI7 906 aa6.39□□□□□ -1.39
RNU6-1249P-201ENST00000363237 NECTIN2Q92692 538 aa6.39□□□□□ -1.39
RNU6-1249P-201ENST00000363237 TRAIPQ9BWF2 469 aa6.39□□□□□ -1.39
RNU6-1249P-201ENST00000363237 MAP3K9P80192 1104 aa6.38□□□□□ -1.39
RNU6-1249P-201ENST00000363237 SERPINA10Q9UK55 444 aa6.38□□□□□ -1.39
RNU6-1249P-201ENST00000363237 OSBPP22059 807 aa6.37□□□□□ -1.39
RNU6-1249P-201ENST00000363237 MCM6Q14566 821 aa6.37□□□□□ -1.39
RNU6-1249P-201ENST00000363237 SH3D19Q5HYK7 790 aa6.37□□□□□ -1.39
RNU6-1249P-201ENST00000363237 GIGYF2Q6Y7W6 1299 aaKnown RBP6.37□□□□□ -1.39
RNU6-1249P-201ENST00000363237 SPNS2Q8IVW8 549 aa6.37□□□□□ -1.39
RNU6-1249P-201ENST00000363237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.37□□□□□ -1.39
RNU6-1249P-201ENST00000363237 ZRANB1Q9UGI0 708 aa6.37□□□□□ -1.39
RNU6-1249P-201ENST00000363237 PTGER2P43116 358 aa6.36□□□□□ -1.39
RNU6-1249P-201ENST00000363237 MAMSTRQ6ZN01 415 aa6.36□□□□□ -1.39
RNU6-1249P-201ENST00000363237 PROSER2Q86WR7 435 aaPredicted RBP6.36□□□□□ -1.39
RNU6-1249P-201ENST00000363237 RAD21O60216 631 aa6.35□□□□□ -1.39
RNU6-1249P-201ENST00000363237 POTEJP0CG39 1038 aa6.35□□□□□ -1.39
RNU6-1249P-201ENST00000363237 MS4A1P11836 297 aa6.35□□□□□ -1.39
RNU6-1249P-201ENST00000363237 FECHP22830 423 aa6.35□□□□□ -1.39
RNU6-1249P-201ENST00000363237 PLPP6Q8IY26 295 aa6.35□□□□□ -1.39
RNU6-1249P-201ENST00000363237 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
RNU6-1249P-201ENST00000363237 ZNF777Q9ULD5 760 aaPredicted RBP6.35□□□□□ -1.39
RNU6-1249P-201ENST00000363237 SKIV2LQ15477 1246 aaKnown RBP6.34□□□□□ -1.39
RNU6-1249P-201ENST00000363237 FNBP4Q8N3X1 1017 aaPredicted RBP6.33□□□□□ -1.4
RNU6-1249P-201ENST00000363237 CLCN1P35523 988 aa6.32□□□□□ -1.4
RNU6-1249P-201ENST00000363237 TIE1P35590 1138 aa6.32□□□□□ -1.4
RNU6-1249P-201ENST00000363237 PTGDRQ13258 359 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms