RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-215ENST00000640055 GPBP1Q86WP2 473 aa13.69□□□□□ -0.22
PRICKLE1-215ENST00000640055 FBXO11Q86XK2 927 aa13.69□□□□□ -0.22
PRICKLE1-215ENST00000640055 SYCP3Q8IZU3 236 aa13.69□□□□□ -0.22
PRICKLE1-215ENST00000640055 PPP1R16BQ96T49 567 aa13.69□□□□□ -0.22
PRICKLE1-215ENST00000640055 JMJD4Q9H9V9 463 aa13.69□□□□□ -0.22
PRICKLE1-215ENST00000640055 AKR1B15C9JRZ8 316 aaPredicted RBP13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 CXCR5P32302 372 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 RASSF7Q02833 373 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 NDUFB10O96000 172 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 SYCP1Q15431 976 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 TMEM132AQ24JP5 1023 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 EAPPQ56P03 285 aaPredicted RBP13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 SLC27A3Q5K4L6 730 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 RAB34Q9BZG1 259 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 USP20Q9Y2K6 914 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 SPP2Q13103 211 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 GRM4Q14833 912 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 KRT31Q15323 416 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 ZKSCAN4Q969J2 545 aaPredicted RBP13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 RABEP2Q9H5N1 569 aa13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 RAVER2Q9HCJ3 691 aaKnown RBP13.68□□□□□ -0.22
PRICKLE1-215ENST00000640055 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 BAZ2AQ9UIF9 1905 aaKnown RBP13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 TMEM150BA6NC51 233 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 NCAPHQ15003 741 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 HS1BP3Q53T59 392 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 KRT26Q7Z3Y9 468 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 CHP1Q99653 195 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 PPP1R13BQ96KQ4 1090 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 BHMT2Q9H2M3 363 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 MYH2Q9UKX2 1941 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 PRPF6O94906 941 aaKnown RBP13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 BMP3P12645 472 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 CYP2J2P51589 502 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 MRFAP1L1Q96HT8 127 aa13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 LUC7L2Q9Y383 392 aaKnown RBP13.67□□□□□ -0.22
PRICKLE1-215ENST00000640055 GCNT3O95395 438 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 ADRA2BP18089 450 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 TNNT3P45378 269 aaPredicted RBP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 FXR1P51114 621 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 RASA3Q14644 834 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 PCIF1Q9H4Z3 704 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 NKRFO15226 690 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 BUB1O43683 1085 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 ABL1P00519 1130 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 POLD1P28340 1107 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 NOP2P46087 812 aaKnown RBP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 FUT2Q10981 343 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 C16orf86Q6ZW13 317 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 ZNF771Q7L3S4 317 aaPredicted RBP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 KCNK18Q7Z418 384 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 CAVIN2O95810 425 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 SHMT1P34896 483 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 SF3A3Q12874 501 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 DDX12PQ92771 950 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 FAM84AQ96KN4 292 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 AGBL1Q96MI9 1066 aa13.66□□□□□ -0.22
PRICKLE1-215ENST00000640055 ARFGEF2Q9Y6D5 1785 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 KIF5CO60282 957 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 JAG1P78504 1218 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 ATP2C1P98194 919 aaPredicted RBP13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 CENPHQ9H3R5 247 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 PPP2R2CQ9Y2T4 447 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 SEC31AO94979 1220 aaKnown RBP13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 PNMA6AP0CW24 399 aaPredicted RBP13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 BANK1Q8NDB2 785 aa13.65□□□□□ -0.22
PRICKLE1-215ENST00000640055 TBCAO75347 108 aaKnown RBP13.65□□□□□ -0.23
PRICKLE1-215ENST00000640055 LARP4BQ92615 738 aaKnown RBP13.65□□□□□ -0.23
PRICKLE1-215ENST00000640055 WDR24Q96S15 920 aa13.65□□□□□ -0.23
PRICKLE1-215ENST00000640055 CCPG1Q9ULG6 757 aa13.65□□□□□ -0.23
PRICKLE1-215ENST00000640055 CCZ1BP86790 482 aa13.64□□□□□ -0.23
PRICKLE1-215ENST00000640055 CCZ1P86791 482 aaPredicted RBP13.64□□□□□ -0.23
PRICKLE1-215ENST00000640055 AMPD3Q01432 767 aa13.64□□□□□ -0.23
PRICKLE1-215ENST00000640055 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
PRICKLE1-215ENST00000640055 MKRN4PQ13434 485 aaPredicted RBP13.64□□□□□ -0.23
PRICKLE1-215ENST00000640055 PRPF4BQ13523 1007 aaKnown RBP13.64□□□□□ -0.23
PRICKLE1-215ENST00000640055 CCDC122Q5T0U0 273 aa13.64□□□□□ -0.23
PRICKLE1-215ENST00000640055 SPATA1Q5VX52 437 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms