RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 SLC43A3Q8NBI5 491 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 GUCD1Q96NT3 240 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 ZKSCAN3Q9BRR0 538 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 DSCC1Q9BVC3 393 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 IL25Q9H293 177 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 VTA1Q9NP79 307 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 DIAPH3Q9NSV4 1193 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 STXBP5LQ9Y2K9 1186 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 Q9Y3F1 56 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 SUPT16HQ9Y5B9 1047 aaKnown RBP8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 GRIN2DO15399 1336 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 MROH7Q68CQ1 1323 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 WDR19Q8NEZ3 1342 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 MYH6P13533 1939 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 LOC102724159A0A0B4J2E5 919 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 A0A0U1RQG5 324 aaPredicted RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 RBM47A0AV96 593 aaKnown RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 DYNC1LI2O43237 492 aaPredicted RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 KDM4AO75164 1064 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 TIMP1P01033 207 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 CD4P01730 458 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 GOLGA8HP0CJ92 632 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 GSPT1P15170 499 aaKnown RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 ALDH5A1P51649 535 aaPredicted RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 FPGSQ05932 587 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 PWP2Q15269 919 aaKnown RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 FSCN1Q16658 493 aaKnown RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 GPATCH4Q5T3I0 446 aaKnown RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 SLC30A10Q6XR72 485 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 EEPD1Q7L9B9 569 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 TLK2Q86UE8 772 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 FAM126BQ8IXS8 530 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 ENAHQ8N8S7 591 aaPredicted RBP8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 UBA5Q9GZZ9 404 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 CPVLQ9H3G5 476 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 ZSWIM5Q9P217 1185 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 PNMA2Q9UL42 364 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 NCOR1O75376 2440 aa8.59□□□□□ -1.03
CACNA1A-222ENST00000636022 XIRP2A4UGR9 3374 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 BAZ2BQ9UIF8 2168 aaKnown RBP8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 B4E1Z4 1266 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 CABYRO75952 493 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 EDNRBP24530 442 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 RPS6P62753 249 aaKnown RBP8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 SMAD3P84022 425 aaKnown RBP8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 IMMTQ16891 758 aaKnown RBP8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 DUSP28Q4G0W2 176 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 CCDC178Q5BJE1 867 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 MFSD5Q6N075 450 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 CXCL17Q6UXB2 119 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 RNF207Q6ZRF8 634 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 NOL8Q76FK4 1167 aaKnown RBP8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 C16orf59Q7L2K0 433 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 IQCA1Q86XH1 822 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 SLC17A8Q8NDX2 589 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 RGS22Q8NE09 1264 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 ZSCAN10Q96SZ4 725 aaPredicted RBP8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 AP5M1Q9H0R1 490 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 ADD3Q9UEY8 706 aaKnown RBP8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 CTNNA3Q9UI47 895 aa8.58□□□□□ -1.04
CACNA1A-222ENST00000636022 TNKSO95271 1327 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 SCN10AQ9Y5Y9 1956 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 PTPDC1A2A3K4 754 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 CALML3P27482 149 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 SEC23AQ15436 765 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 TTC22Q5TAA0 569 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 RASIP1Q5U651 963 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 ADGRF4Q8IZF3 695 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 DNERQ8NFT8 737 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 RNPC3Q96LT9 517 aaKnown RBP8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 FAM161BQ96MY7 647 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 SEZ6LQ9BYH1 1024 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 WDR11Q9BZH6 1224 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 MAF1Q9H063 256 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 TTYH1Q9H313 450 aaPredicted RBP8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 KAT14Q9H8E8 782 aa8.57□□□□□ -1.04
CACNA1A-222ENST00000636022 TLR3O15455 904 aaKnown RBP8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 ZEB2O60315 1214 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 CSF2RAP15509 400 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 CYP2C18P33260 490 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 PSMC6P62333 389 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 ITGA7Q13683 1181 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 CDC37Q16543 378 aaPredicted RBP8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 USH1GQ495M9 461 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 ASPRV1Q53RT3 343 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 TMEM240Q5SV17 173 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 ZNF697Q5TEC3 545 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 TBC1D5Q92609 795 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 CDX2Q99626 313 aaPredicted RBP8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 KRT23Q9C075 422 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 TRPV6Q9H1D0 765 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 CNNM2Q9H8M5 875 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 JMJD4Q9H9V9 463 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 KIAA1217Q5T5P2 1943 aa8.56□□□□□ -1.04
CACNA1A-222ENST00000636022 ABCB11O95342 1321 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms