RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 SNHG28P0DPA3 235 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 ST5P78524 1137 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 CDK17Q00537 523 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 AMPD2Q01433 879 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 GABPAQ06546 454 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 PDE4DQ08499 809 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 LETM2Q2VYF4 491 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
TCF4-254ENST00000626584 TBCKQ8TEA7 893 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 GPR101Q96P66 508 aaPredicted RBP11.22□□□□□ -0.61
TCF4-254ENST00000626584 MTMR9Q96QG7 549 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 ERGIC2Q96RQ1 377 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 ABCB11O95342 1321 aa11.22□□□□□ -0.61
TCF4-254ENST00000626584 PVALEFA0A1B0GWK0 134 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 PSMD14O00487 310 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 SASH3O75995 380 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 PDHBP11177 359 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 PIP4K2BP78356 416 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
TCF4-254ENST00000626584 WDR59Q6PJI9 974 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 USP17L2Q6R6M4 530 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 ZNF771Q7L3S4 317 aaPredicted RBP11.21□□□□□ -0.61
TCF4-254ENST00000626584 CCDC170Q8IYT3 715 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.61
TCF4-254ENST00000626584 CSGALNACT2Q8N6G5 542 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 PIGSQ96S52 555 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 CHP1Q99653 195 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 SLF1Q9BQI6 1058 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 TUBGCP2Q9BSJ2 902 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 FUT8Q9BYC5 575 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 EPC1Q9H2F5 836 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 USP21Q9UK80 565 aa11.21□□□□□ -0.61
TCF4-254ENST00000626584 RASSF10A6NK89 507 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 USP17L5A8MUK1 530 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 MAP2K7O14733 419 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 SERPINB2P05120 415 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 GYS1P13807 737 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 ASIC1P78348 528 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 KRT83P78385 493 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 ZBED6P86452 979 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 GRB10Q13322 594 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 PDIA5Q14554 519 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 MFSD14BQ5SR56 506 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 ANKRD40Q6AI12 368 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 CENPPQ6IPU0 288 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.62
TCF4-254ENST00000626584 CNOT6LQ96LI5 555 aaKnown RBP11.21□□□□□ -0.62
TCF4-254ENST00000626584 PLIN2Q99541 437 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 DAGLAQ9Y4D2 1042 aa11.21□□□□□ -0.62
TCF4-254ENST00000626584 SPATA31A6Q5VVP1 1343 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 EIF3CLB5ME19 914 aaKnown RBP11.2□□□□□ -0.62
TCF4-254ENST00000626584 ABL1P00519 1130 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 CYLC1P35663 651 aaPredicted RBP11.2□□□□□ -0.62
TCF4-254ENST00000626584 ADCY7P51828 1080 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 HERVK_113P62684 666 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 STK4Q13043 487 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 LONRF2Q1L5Z9 754 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 MIIPQ5JXC2 388 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 SV2BQ7L1I2 683 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 PNMA5Q96PV4 448 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 EIF3CQ99613 913 aaKnown RBP11.2□□□□□ -0.62
TCF4-254ENST00000626584 LRRC27Q9C0I9 530 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 CPVLQ9H3G5 476 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 ST7Q9NRC1 585 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 BLOC1S4Q9NUP1 217 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 POLLQ9UGP5 575 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 ZHX1Q9UKY1 873 aaPredicted RBP11.2□□□□□ -0.62
TCF4-254ENST00000626584 MYO6Q9UM54 1294 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
TCF4-254ENST00000626584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
TCF4-254ENST00000626584 CTAGE15A4D2H0 777 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 B4DLN1 442 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 SLC26A4O43511 780 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 EDIL3O43854 480 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 ONECUT3O60422 494 aaPredicted RBP11.19□□□□□ -0.62
TCF4-254ENST00000626584 ERLIN1O75477 346 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 CTAGE8P0CG41 777 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 HNRNPH3P31942 346 aaKnown RBP11.19□□□□□ -0.62
TCF4-254ENST00000626584 TECP42680 631 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 TBC1D8BQ0IIM8 1120 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 CALCRLQ16602 461 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 TMEM266Q2M3C6 531 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 TMEM119Q4V9L6 283 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 PAPD7Q5XG87 772 aaKnown RBP11.19□□□□□ -0.62
TCF4-254ENST00000626584 TRAPPC11Q7Z392 1133 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 CTAGE6Q86UF2 777 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 POTEDQ86YR6 584 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 CTAGE4Q8IX94 777 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 SP8Q8IXZ3 490 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 GUF1Q8N442 669 aaKnown RBP11.19□□□□□ -0.62
TCF4-254ENST00000626584 EHBP1Q8NDI1 1231 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
TCF4-254ENST00000626584 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
TCF4-254ENST00000626584 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms