RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
SPCS1-206ENST00000619898 AK8Q96MA6 479 aa13.61□□□□□ -0.23
SPCS1-206ENST00000619898 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
SPCS1-206ENST00000619898 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
SPCS1-206ENST00000619898 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
SPCS1-206ENST00000619898 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 CCDC172P0C7W6 258 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 MAN2A1Q16706 1144 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 SRBD1Q8N5C6 995 aaKnown RBP13.6□□□□□ -0.23
SPCS1-206ENST00000619898 CCDC155Q8N6L0 562 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 MMS19Q96T76 1030 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
SPCS1-206ENST00000619898 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 PCDHA13Q9Y5I0 950 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
SPCS1-206ENST00000619898 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 SASH3O75995 380 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 LARP4BQ92615 738 aaKnown RBP13.6□□□□□ -0.23
SPCS1-206ENST00000619898 KRT12Q99456 494 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 NDST4Q9H3R1 872 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 EIF3CLB5ME19 914 aaKnown RBP13.6□□□□□ -0.23
SPCS1-206ENST00000619898 PPP1R3GB7ZBB8 358 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 HEXIM1O94992 359 aaKnown RBP13.6□□□□□ -0.23
SPCS1-206ENST00000619898 NEFHP12036 1026 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 FAM26FQ5R3K3 315 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 TRAPPC3LQ5T215 181 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 STXBP4Q6ZWJ1 553 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 TBCKQ8TEA7 893 aa13.6□□□□□ -0.23
SPCS1-206ENST00000619898 EIF3CQ99613 913 aaKnown RBP13.6□□□□□ -0.23
SPCS1-206ENST00000619898 RPL13P26373 211 aaKnown RBP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 RSRC2Q7L4I2 434 aaKnown RBP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 ITIH6Q6UXX5 1313 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 SPDYE3A6NKU9 549 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 ZRANB2O95218 330 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 ARHGAP25P42331 645 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 ERFEQ4G0M1 354 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 BEND6Q5SZJ8 279 aaPredicted RBP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 KRT26Q7Z3Y9 468 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 PEX26Q7Z412 305 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 CABS1Q96KC9 395 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 UFL1O94874 794 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 BMP6P22004 513 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 SF3A3Q12874 501 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 TTLL12Q14166 644 aaPredicted RBP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 RUFY4Q6ZNE9 571 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 SRLQ86TD4 932 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 SCLT1Q96NL6 688 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 MLXIPQ9HAP2 919 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 TFR2Q9UP52 801 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 JCADQ9P266 1359 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 BAZ2BQ9UIF8 2168 aaKnown RBP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 FAM13AO94988 1023 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 FTCDO95954 541 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 PRDX5P30044 214 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 HS2ST1Q7LGA3 356 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 COG1Q8WTW3 980 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 FAM217BQ9NTX9 383 aaPredicted RBP13.59□□□□□ -0.23
SPCS1-206ENST00000619898 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 RASAL2Q9UJF2 1139 aa13.59□□□□□ -0.23
SPCS1-206ENST00000619898 AKAP12Q02952 1782 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 ANO9A1A5B4 782 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 H3BQF6 201 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 EPB41P11171 864 aaKnown RBP13.58□□□□□ -0.24
SPCS1-206ENST00000619898 ERVK-24P63145 666 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 TBX2Q13207 712 aaPredicted RBP13.58□□□□□ -0.24
SPCS1-206ENST00000619898 SEPT7Q16181 437 aaKnown RBP13.58□□□□□ -0.24
SPCS1-206ENST00000619898 KRT71Q3SY84 523 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 ZNF185O15231 689 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 FLOT1O75955 427 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 MAGEA9P43362 315 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 DAAM2Q86T65 1068 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
SPCS1-206ENST00000619898 DCP1AQ9NPI6 582 aaPredicted RBP13.58□□□□□ -0.24
SPCS1-206ENST00000619898 CAPN11Q9UMQ6 739 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 PCDHA12Q9UN75 941 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 A0A087WUV0 522 aaPredicted RBP13.58□□□□□ -0.24
SPCS1-206ENST00000619898 CTNNA1P35221 906 aaKnown RBP13.58□□□□□ -0.24
SPCS1-206ENST00000619898 USP17L2Q6R6M4 530 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 GPBP1Q86WP2 473 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 CCDC25Q86WR0 208 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 PANK4Q9NVE7 773 aa13.58□□□□□ -0.24
SPCS1-206ENST00000619898 ZNF804BA4D1E1 1349 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 A0A1W2PQC6 194 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 TFRCP02786 760 aaKnown RBP13.57□□□□□ -0.24
SPCS1-206ENST00000619898 NF2P35240 595 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 MSL1Q68DK7 614 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 BRINP3Q76B58 766 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 CCDC91Q7Z6B0 441 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 LRRC47Q8N1G4 583 aaKnown RBP13.57□□□□□ -0.24
SPCS1-206ENST00000619898 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 ANKS4BQ8N8V4 417 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 AGPAT5Q9NUQ2 364 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms