RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 DACH1Q9UI36 760 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 MRFAP1Q9Y605 127 aa11.96□□□□□ -0.49
PCDHGC3-202ENST00000611950 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 MYH8P13535 1937 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 CCDC175P0C221 793 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 NLRP5P59047 1200 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 GRIK3Q13003 919 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 SF3B3Q15393 1217 aaKnown RBP11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 TTC38Q5R3I4 469 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 KCNV1Q6PIU1 500 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 NUP88Q99567 741 aaPredicted RBP11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 PICK1Q9NRD5 415 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 CEP131Q9UPN4 1083 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.5
PCDHGC3-202ENST00000611950 MYH6P13533 1939 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 C10orf71Q711Q0 1435 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 TBC1D8O95759 1140 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 IMPDH2P12268 514 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 MAP3K9P80192 1104 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 HTRA3P83110 453 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 UBE4AQ14139 1066 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 DHX8Q14562 1220 aaKnown RBP11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 C9orf131Q5VYM1 1079 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 CC2D1AQ6P1N0 951 aaPredicted RBP11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 SRBD1Q8N5C6 995 aaKnown RBP11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 COL5A3P25940 1745 aaPredicted RBP11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 A0A1B0GTH6 734 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 GYPCP04921 128 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 XBP1P17861 261 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 APTXQ7Z2E3 356 aaKnown RBP11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 IQCA1Q86XH1 822 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 RNF26Q9BY78 433 aaPredicted RBP11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 ADGRG1Q9Y653 693 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 SCN7AQ01118 1682 aa11.95□□□□□ -0.5
PCDHGC3-202ENST00000611950 BRCA1P38398 1863 aaKnown RBP11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 XDHP47989 1333 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 ENC1O14682 589 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 PHACTR2O75167 634 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 RPS6KA4O75676 772 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 PRDX5P30044 214 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 PDCD2Q16342 344 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 FAM200BP0CF97 657 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 TROAPQ12815 778 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 KRT31Q15323 416 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 NT5DC1Q5TFE4 455 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 SPATA1Q5VX52 437 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 ELOA2Q8IYF1 753 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 DNAJC5GQ8N7S2 189 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 MTRQ99707 1265 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 PHF20Q9BVI0 1012 aa11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 ADD3Q9UEY8 706 aaKnown RBP11.94□□□□□ -0.5
PCDHGC3-202ENST00000611950 PPP1R3GB7ZBB8 358 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 IL17AQ16552 155 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 CAVIN4Q5BKX8 364 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 HHATQ5VTY9 493 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 EFCAB13Q8IY85 973 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 GDAP1L1Q96MZ0 367 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 BRIP1Q9BX63 1249 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 ARFGAP3Q9NP61 516 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 AP1G2O75843 785 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 SMC1AQ14683 1233 aaKnown RBP11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 SKIDA1Q1XH10 827 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 NCAPH2Q6IBW4 605 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 CHP1Q99653 195 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 PIM2Q9P1W9 311 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 GUCA1BQ9UMX6 200 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
PCDHGC3-202ENST00000611950 TSPY2A6NKD2 308 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 TMCO5BA8MYB1 307 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 KIF5CO60282 957 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 MFAP3LO75121 409 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 FGRP09769 529 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 ERVK-24P63145 666 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 NPY5RQ15761 445 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 CTCFLQ8NI51 663 aaPredicted RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 GOLGA1Q92805 767 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 PNKPQ96T60 521 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 IQCGQ9H095 443 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 WDR90Q96KV7 1748 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 ARFGEF1Q9Y6D6 1849 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 PRPF3O43395 683 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 MECOMQ03112 1051 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms