RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 TRIM22Q8IYM9 498 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 TDHQ8IZJ6 230 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 ATG4CQ96DT6 458 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 MAF1Q9H063 256 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.25
CHMP2A-207ENST00000600804 ZBED4O75132 1171 aa13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 CNMDO75829 334 aa13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 DEXIO95424 95 aa13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 ERVK-9P63128 1117 aa13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 ERVK-24P63145 666 aa13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 CDC37Q16543 378 aaPredicted RBP13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 MORN1Q5T089 497 aa13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 KIFC2Q96AC6 838 aa13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
CHMP2A-207ENST00000600804 ZNF536O15090 1300 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 ICAM1P05362 532 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 XRCC5P13010 732 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 COPB2P35606 906 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 AKAP17AQ02040 695 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 PKN1Q16512 942 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 QRICH1Q2TAL8 776 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 TKFCQ3LXA3 575 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 GPR142Q7Z601 462 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 CMTR1Q8N1G2 835 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 WASF1Q92558 559 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 PIGSQ96S52 555 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 NUDT12Q9BQG2 462 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 TEX13BQ9BXU2 312 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 CPVLQ9H3G5 476 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 FLRT1Q9NZU1 646 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 SEC63Q9UGP8 760 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 ISY1Q9ULR0 285 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 KIF3AQ9Y496 699 aa13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 V9GY48 417 aaPredicted RBP13.44□□□□□ -0.26
CHMP2A-207ENST00000600804 SCG2P13521 617 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 TMEM132BQ14DG7 1078 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 PPP1R18Q6NYC8 613 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 GPRC5AQ8NFJ5 357 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 PHKBQ93100 1093 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 PAGR1Q9BTK6 254 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 AMNQ9BXJ7 453 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 SLC26A6Q9BXS9 759 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 UBE2OQ9C0C9 1292 aaKnown RBP13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 ORC3Q9UBD5 711 aaPredicted RBP13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 STXBP5LQ9Y2K9 1186 aa13.43□□□□□ -0.26
CHMP2A-207ENST00000600804 JAK2O60674 1132 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 SLC25A27O95847 323 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 PDIA4P13667 645 aaKnown RBP13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 STAT3P40763 770 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 RIOX2Q8IUF8 465 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 SAMD3Q8N6K7 520 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 SHCBP1Q8NEM2 672 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 SOCS4Q8WXH5 440 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 SPATC1LQ9H0A9 340 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 BARHL2Q9NY43 387 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 BTBD7Q9P203 1132 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 SMC3Q9UQE7 1217 aa13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-207ENST00000600804 ABCB11O95342 1321 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 ESYT2A0FGR8 921 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 IGHA2P01877 340 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 MAPK4P31152 587 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 CCNA1P78396 465 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 GHRHRQ02643 423 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 PLEKHH3Q7Z736 793 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 CHST13Q8NET6 341 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 CCDC12Q8WUD4 166 aaPredicted RBP13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 GUCD1Q96NT3 240 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 GLT8D2Q9H1C3 349 aa13.41□□□□□ -0.26
CHMP2A-207ENST00000600804 XBP1P17861 261 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 PDCP20941 246 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 RGS2P41220 211 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 WWC2Q6AWC2 1192 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 GALNT17Q6IS24 598 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 HOMER1Q86YM7 354 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 APBA2Q99767 749 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 MROH8Q9H579 483 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 MAP3K20Q9NYL2 800 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 FBXO40Q9UH90 709 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 CCPG1Q9ULG6 757 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 TTC28Q96AY4 2481 aa13.4□□□□□ -0.26
CHMP2A-207ENST00000600804 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms