RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 DDTLA6NHG4 134 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 TCP10L2B9ZVM9 353 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 NPR1P16066 1061 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 CERKLQ49MI3 558 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 SLC27A3Q5K4L6 730 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 CNGA4Q8IV77 575 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 ZNF397Q8NF99 534 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 DRC1Q96MC2 740 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 PCDHA1Q9Y5I3 950 aa12.91□□□□□ -0.34
ARHGEF1-220ENST00000600274 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.343e-7■□□□□ 10.1
ARHGEF1-220ENST00000600274 EEF2P13639 858 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 APTXQ7Z2E3 356 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 STAT3P40763 770 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 DNA2P51530 1060 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 UBXN2AP68543 259 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 SPAG1Q07617 926 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 SYCP1Q15431 976 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 ADSSL1Q8N142 457 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 FEZ1Q99689 392 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 TRIM9Q9C026 710 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 VEZTQ9HBM0 779 aa12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 DDX25Q9UHL0 483 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-220ENST00000600274 TTC26A0AVF1 554 aa12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 ENC1O14682 589 aa12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 MYO1BO43795 1136 aa12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 SHMT1P34896 483 aa12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 ELOA2Q8IYF1 753 aaPredicted RBP12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 ANKS1AQ92625 1134 aa12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 CNOT6LQ96LI5 555 aaKnown RBP12.9□□□□□ -0.35
ARHGEF1-220ENST00000600274 H0YIN7 160 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 MEIS1O00470 390 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 RAD17O75943 681 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 KIF20AO95235 890 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 SLFN13Q68D06 897 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 KIAA1328Q86T90 577 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 ADGRG1Q9Y653 693 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 SCN7AQ01118 1682 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 C21orf2O43822 256 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 PDE6BP35913 854 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 ERVK-24P63145 666 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 GALNT17Q6IS24 598 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 CUL5Q93034 780 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 ABHD10Q9NUJ1 306 aa12.89□□□□□ -0.35
ARHGEF1-220ENST00000600274 ECE2O60344 883 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 PPP1R11O60927 126 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 RHOXF2BP0C7M4 288 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 AMPD3Q01432 767 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 ICA1Q05084 483 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 KCNK18Q7Z418 384 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 RHOXF2Q9BQY4 288 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 AGPAT5Q9NUQ2 364 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 GAKO14976 1311 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 LAMB2P55268 1798 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 NPHP3-ACAD11A0A0J9YXS1 232 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 H7C1D1 291 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 M0R2N6 131 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 ARID5AQ03989 594 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 PRR16Q569H4 304 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 LARP4BQ92615 738 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 MYMKA6NI61 221 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 E9PMD0 336 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 RGL2O15211 777 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 PPIP5K2O43314 1243 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 ZNF76P36508 570 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 UTP14CQ5TAP6 766 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 MASTLQ96GX5 879 aa12.88□□□□□ -0.35
ARHGEF1-220ENST00000600274 CRACR2AQ9BSW2 395 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms