RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ATXN2Q99700 1313 aaKnown RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 PARP1P09874 1014 aaKnown RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 TUBP50607 506 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 GOLPH3Q9H4A6 298 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 TRIM33Q9UPN9 1127 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 ANKRD33BA6NCL7 494 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 ZBTB43O43298 467 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 SMIM24O75264 130 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 SNRPA1P09661 255 aaKnown RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 PAFAH1B1P43034 410 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 IFNAR2P48551 515 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 SLC8A3P57103 927 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 MAGOHP61326 146 aaKnown RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 KRT83P78385 493 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 LRRC24Q50LG9 513 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 NBPF10Q6P3W6 841 aaKnown RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 CCDC50Q8IVM0 306 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 MAB21L3Q8N8X9 362 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 MAGOHBQ96A72 148 aaKnown RBP16.79■□□□□ 0.28
CIRBP-228ENST00000590347 HOOK2Q96ED9 719 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 AGAP1Q9UPQ3 857 aa16.79■□□□□ 0.28
CIRBP-228ENST00000590347 SPDYE5A6NIY4 337 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 PAK1Q13153 545 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 TBC1D25Q3MII6 688 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 DNAAF5Q86Y56 855 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 UHMK1Q8TAS1 419 aaKnown RBP16.78■□□□□ 0.28
CIRBP-228ENST00000590347 IFIH1Q9BYX4 1025 aaKnown RBP16.78■□□□□ 0.28
CIRBP-228ENST00000590347 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.78■□□□□ 0.28
CIRBP-228ENST00000590347 FLT3P36888 993 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 XRCC4Q13426 336 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
CIRBP-228ENST00000590347 GKAP1Q5VSY0 366 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-228ENST00000590347 MB21D1Q8N884 522 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
CIRBP-228ENST00000590347 ANGEL1Q9UNK9 670 aaKnown RBP16.78■□□□□ 0.28
CIRBP-228ENST00000590347 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-228ENST00000590347 TRAPPC3O43617 180 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 MYZAPP0CAP1 466 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 FECHP22830 423 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 CTCFP49711 727 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-228ENST00000590347 SCARF1Q14162 830 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 GCKRQ14397 625 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 CCT6BQ92526 530 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 RPS6KL1Q9Y6S9 549 aa16.77■□□□□ 0.28
CIRBP-228ENST00000590347 TACC1O75410 805 aa16.77■□□□□ 0.27
CIRBP-228ENST00000590347 CTNNA1P35221 906 aaKnown RBP16.77■□□□□ 0.27
CIRBP-228ENST00000590347 CYLC1P35663 651 aaPredicted RBP16.77■□□□□ 0.27
CIRBP-228ENST00000590347 PRCPP42785 496 aa16.77■□□□□ 0.27
CIRBP-228ENST00000590347 C2CD5Q86YS7 1000 aa16.77■□□□□ 0.27
CIRBP-228ENST00000590347 IRF2BP1Q8IU81 584 aa16.77■□□□□ 0.27
CIRBP-228ENST00000590347 TRIML1Q8N9V2 468 aa16.77■□□□□ 0.27
CIRBP-228ENST00000590347 OSBPL1AQ9BXW6 950 aa16.77■□□□□ 0.27
CIRBP-228ENST00000590347 ZNHIT6Q9NWK9 470 aaKnown RBP16.77■□□□□ 0.27
CIRBP-228ENST00000590347 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.27
CIRBP-228ENST00000590347 A0A087WZG4 1122 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 ADORA1P30542 326 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 SPA17Q15506 151 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 ITFG2Q969R8 447 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 TRIM31Q9BZY9 425 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 FAM207AQ9NSI2 230 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 TLDC2A0PJX2 215 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 F8W031 263 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 RASSF7Q02833 373 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 SSRP1Q08945 709 aaKnown RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 PAK2Q13177 524 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 SLC30A9Q6PML9 568 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 IFT20Q8IY31 132 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 ELAC2Q9BQ52 826 aaKnown RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 SELENOSQ9BQE4 189 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 PUS3Q9BZE2 481 aaKnown RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 TMEM165Q9HC07 324 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 FAM217BQ9NTX9 383 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 ABCF3Q9NUQ8 709 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 LIMA1Q9UHB6 759 aaKnown RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 DPPA5A6NC42 116 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 TRIM37O94972 964 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 SHBGP04278 402 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 TMEM67Q5HYA8 995 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 MEX3CQ5U5Q3 659 aaKnown RBP16.76■□□□□ 0.27
CIRBP-228ENST00000590347 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
CIRBP-228ENST00000590347 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
CIRBP-228ENST00000590347 RFX5P48382 616 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-228ENST00000590347 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
CIRBP-228ENST00000590347 CAVIN3Q969G5 261 aa16.75■□□□□ 0.27
CIRBP-228ENST00000590347 ACSBG1Q96GR2 724 aa16.75■□□□□ 0.27
CIRBP-228ENST00000590347 XDHP47989 1333 aa16.75■□□□□ 0.27
CIRBP-228ENST00000590347 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
CIRBP-228ENST00000590347 HSD17B3P37058 310 aa16.75■□□□□ 0.27
CIRBP-228ENST00000590347 CCDC47Q96A33 483 aaKnown RBP16.75■□□□□ 0.27
CIRBP-228ENST00000590347 TRIM47Q96LD4 638 aa16.75■□□□□ 0.27
CIRBP-228ENST00000590347 EBF2Q9HAK2 575 aa16.75■□□□□ 0.27
CIRBP-228ENST00000590347 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 RAD51CO43502 376 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 AKR1B10O60218 316 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 ALDH5A1P51649 535 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-228ENST00000590347 LAMB3Q13751 1172 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms