RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
MRPL54-202ENST00000589174 MROH7Q68CQ1 1323 aa13.04□□□□□ -0.32
MRPL54-202ENST00000589174 MYH6P13533 1939 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 RBM47A0AV96 593 aaKnown RBP13.03□□□□□ -0.32
MRPL54-202ENST00000589174 ASB14A6NK59 587 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 ARHGEF15O94989 841 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
MRPL54-202ENST00000589174 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 CTAGE1Q96RT6 745 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 IL25Q9H293 177 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 HIPK3Q9H422 1215 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 TRMT13Q9NUP7 481 aaKnown RBP13.03□□□□□ -0.32
MRPL54-202ENST00000589174 NEDD4P46934 1319 aa13.03□□□□□ -0.32
MRPL54-202ENST00000589174 ARIH2O95376 493 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 EDNRBP24530 442 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 RABGGTBP53611 331 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 CCDC96Q2M329 555 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 DUSP28Q4G0W2 176 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 RRP12Q5JTH9 1297 aaKnown RBP13.02□□□□□ -0.33
MRPL54-202ENST00000589174 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 NOL8Q76FK4 1167 aaKnown RBP13.02□□□□□ -0.33
MRPL54-202ENST00000589174 OTOP2Q7RTS6 562 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 SPC25Q9HBM1 224 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 TCP11L1Q9NUJ3 509 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 TTC28Q96AY4 2481 aa13.02□□□□□ -0.33
MRPL54-202ENST00000589174 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
MRPL54-202ENST00000589174 XIRP2A4UGR9 3374 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
MRPL54-202ENST00000589174 TOP1P11387 765 aaKnown RBP13.01□□□□□ -0.33
MRPL54-202ENST00000589174 CYP2C9P11712 490 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 PURAQ00577 322 aaKnown RBP13.01□□□□□ -0.33
MRPL54-202ENST00000589174 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
MRPL54-202ENST00000589174 GPNMBQ14956 572 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 LRRFIP1Q32MZ4 808 aaKnown RBP13.01□□□□□ -0.33
MRPL54-202ENST00000589174 TMEM199Q8N511 208 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 ZKSCAN3Q9BRR0 538 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 ALDH8A1Q9H2A2 487 aaPredicted RBP13.01□□□□□ -0.33
MRPL54-202ENST00000589174 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 COL20A1Q9P218 1284 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 Q9Y3F1 56 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
MRPL54-202ENST00000589174 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
MRPL54-202ENST00000589174 COL4A4P53420 1690 aaPredicted RBP13□□□□□ -0.33
MRPL54-202ENST00000589174 GOLGA8HP0CJ92 632 aa13□□□□□ -0.33
MRPL54-202ENST00000589174 RPS6P62753 249 aaKnown RBP13□□□□□ -0.33
MRPL54-202ENST00000589174 TTLL4Q14679 1199 aa13□□□□□ -0.33
MRPL54-202ENST00000589174 MCMDC2Q4G0Z9 681 aa13□□□□□ -0.33
MRPL54-202ENST00000589174 PSRC1Q6PGN9 363 aaPredicted RBP13□□□□□ -0.33
MRPL54-202ENST00000589174 SPRED2Q7Z698 418 aa13□□□□□ -0.33
MRPL54-202ENST00000589174 WDR11Q9BZH6 1224 aa13□□□□□ -0.33
MRPL54-202ENST00000589174 CCDC171Q6TFL3 1326 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 EPOPA6NHQ4 379 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 TLR3O15455 904 aaKnown RBP12.99□□□□□ -0.33
MRPL54-202ENST00000589174 CABYRO75952 493 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 IGHDP01880 384 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 CALML3P27482 149 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 TCTN1Q2MV58 587 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 UBA5Q9GZZ9 404 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 AP5M1Q9H0R1 490 aa12.99□□□□□ -0.33
MRPL54-202ENST00000589174 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
MRPL54-202ENST00000589174 PTPDC1A2A3K4 754 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 RFXAPO00287 272 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 FGBP02675 491 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 SLC35G1Q2M3R5 365 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 NBPF20Q3BBV1 942 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 CCDC62Q6P9F0 684 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
MRPL54-202ENST00000589174 TNKSO95271 1327 aa12.97□□□□□ -0.33
MRPL54-202ENST00000589174 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
MRPL54-202ENST00000589174 OPLAHO14841 1288 aa12.97□□□□□ -0.33
MRPL54-202ENST00000589174 SDSP20132 328 aa12.97□□□□□ -0.33
MRPL54-202ENST00000589174 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
MRPL54-202ENST00000589174 KRT40Q6A162 431 aa12.97□□□□□ -0.33
MRPL54-202ENST00000589174 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
MRPL54-202ENST00000589174 DOCK5Q9H7D0 1870 aa12.97□□□□□ -0.33
MRPL54-202ENST00000589174 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.33
MRPL54-202ENST00000589174 A6NJR5 290 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 MYL3P08590 195 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 HIC1Q14526 733 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 USH1GQ495M9 461 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 DEFB128Q7Z7B8 93 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 OR6J1Q8NGC5 347 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
MRPL54-202ENST00000589174 KAT2BQ92831 832 aa12.96□□□□□ -0.33
MRPL54-202ENST00000589174 TAAR1Q96RJ0 339 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms