RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
TPM4-205ENST00000586833 ANKLE1Q8NAG6 615 aa16.28■□□□□ 0.2
TPM4-205ENST00000586833 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
TPM4-205ENST00000586833 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
TPM4-205ENST00000586833 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
TPM4-205ENST00000586833 GLT8D2Q9H1C3 349 aa16.28■□□□□ 0.2
TPM4-205ENST00000586833 FAM184BQ9ULE4 1060 aa16.28■□□□□ 0.2
TPM4-205ENST00000586833 RARBP10826 455 aa16.27■□□□□ 0.2
TPM4-205ENST00000586833 CCND3P30281 292 aaPredicted RBP16.27■□□□□ 0.2
TPM4-205ENST00000586833 ALDH5A1P51649 535 aaPredicted RBP16.27■□□□□ 0.2
TPM4-205ENST00000586833 CNTN2Q02246 1040 aa16.27■□□□□ 0.2
TPM4-205ENST00000586833 PDE4DQ08499 809 aa16.27■□□□□ 0.2
TPM4-205ENST00000586833 ACVR2BQ13705 512 aa16.27■□□□□ 0.2
TPM4-205ENST00000586833 COL9A3Q14050 684 aaPredicted RBP16.27■□□□□ 0.2
TPM4-205ENST00000586833 PPP1R18Q6NYC8 613 aa16.27■□□□□ 0.2
TPM4-205ENST00000586833 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
TPM4-205ENST00000586833 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
TPM4-205ENST00000586833 SPC25Q9HBM1 224 aa16.27■□□□□ 0.2
TPM4-205ENST00000586833 NID2Q14112 1375 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 POTEFA5A3E0 1075 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 SEC24BO95487 1268 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 IGHA2P01877 340 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 EN2P19622 333 aaPredicted RBP16.26■□□□□ 0.19
TPM4-205ENST00000586833 PDIA3P30101 505 aaKnown RBP16.26■□□□□ 0.19
TPM4-205ENST00000586833 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 CMTR1Q8N1G2 835 aaKnown RBP16.26■□□□□ 0.19
TPM4-205ENST00000586833 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 SYTL5Q8TDW5 730 aaPredicted RBP16.26■□□□□ 0.19
TPM4-205ENST00000586833 IWS1Q96ST2 819 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 CRISPLD2Q9H0B8 497 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
TPM4-205ENST00000586833 EHMT1Q9H9B1 1298 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 VTA1Q9NP79 307 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 MGAMO43451 1857 aa16.26■□□□□ 0.19
TPM4-205ENST00000586833 TAL1P17542 331 aaPredicted RBP16.25■□□□□ 0.19
TPM4-205ENST00000586833 RGS19P49795 217 aa16.25■□□□□ 0.19
TPM4-205ENST00000586833 HSD17B4P51659 736 aa16.25■□□□□ 0.19
TPM4-205ENST00000586833 NEK4P51957 841 aa16.25■□□□□ 0.19
TPM4-205ENST00000586833 GHRHRQ02643 423 aa16.25■□□□□ 0.19
TPM4-205ENST00000586833 TOB2Q14106 344 aaPredicted RBP16.25■□□□□ 0.19
TPM4-205ENST00000586833 RMDN3Q96TC7 470 aa16.25■□□□□ 0.19
TPM4-205ENST00000586833 OGDHLQ9ULD0 1010 aa16.25■□□□□ 0.19
TPM4-205ENST00000586833 V9GY48 417 aaPredicted RBP16.25■□□□□ 0.19
TPM4-205ENST00000586833 CNTNAP5Q8WYK1 1306 aa16.24■□□□□ 0.19
TPM4-205ENST00000586833 PPP1R11O60927 126 aaPredicted RBP16.24■□□□□ 0.19
TPM4-205ENST00000586833 FARP2O94887 1054 aaPredicted RBP16.24■□□□□ 0.19
TPM4-205ENST00000586833 SNAI1O95863 264 aaPredicted RBP16.24■□□□□ 0.19
TPM4-205ENST00000586833 ADD1P35611 737 aaKnown RBP16.24■□□□□ 0.19
TPM4-205ENST00000586833 NAPAP54920 295 aa16.24■□□□□ 0.19
TPM4-205ENST00000586833 MLLT1Q03111 559 aaPredicted RBP16.24■□□□□ 0.19
TPM4-205ENST00000586833 SLC35G1Q2M3R5 365 aa16.24■□□□□ 0.19
TPM4-205ENST00000586833 PRAMEF19Q5SWL8 479 aa16.24■□□□□ 0.19
TPM4-205ENST00000586833 NOL8Q76FK4 1167 aaKnown RBP16.24■□□□□ 0.19
TPM4-205ENST00000586833 MORC4Q8TE76 937 aa16.24■□□□□ 0.19
TPM4-205ENST00000586833 RNF26Q9BY78 433 aaPredicted RBP16.24■□□□□ 0.19
TPM4-205ENST00000586833 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
TPM4-205ENST00000586833 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
TPM4-205ENST00000586833 PRPF3O43395 683 aaKnown RBP16.23■□□□□ 0.19
TPM4-205ENST00000586833 ZNF865P0CJ78 1059 aaPredicted RBP16.23■□□□□ 0.19
TPM4-205ENST00000586833 IFNAR1P17181 557 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 CDC27P30260 824 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
TPM4-205ENST00000586833 CCT2P78371 535 aaKnown RBP16.23■□□□□ 0.19
TPM4-205ENST00000586833 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
TPM4-205ENST00000586833 STXBP2Q15833 593 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 IQSEC1Q6DN90 963 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 NECAB2Q7Z6G3 386 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 RNF180Q86T96 592 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 TRPV1Q8NER1 839 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 CCDC148Q8NFR7 591 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 FGD4Q96M96 766 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 HTATIP2Q9BUP3 242 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 XPNPEP3Q9NQH7 507 aa16.23■□□□□ 0.19
TPM4-205ENST00000586833 SPDYE3A6NKU9 549 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 PIK3CDO00329 1044 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 ST18O60284 1047 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 SCG2P13521 617 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 AK2P54819 239 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 STK3Q13188 491 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 RABEP1Q15276 862 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 PFKFB3Q16875 520 aaPredicted RBP16.22■□□□□ 0.19
TPM4-205ENST00000586833 LHX8Q68G74 356 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 SLC26A6Q9BXS9 759 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 FAM217BQ9NTX9 383 aaPredicted RBP16.22■□□□□ 0.19
TPM4-205ENST00000586833 BARHL2Q9NY43 387 aa16.22■□□□□ 0.19
TPM4-205ENST00000586833 DNM1LO00429 736 aa16.21■□□□□ 0.19
TPM4-205ENST00000586833 NKRFO15226 690 aaKnown RBP eCLIP16.21■□□□□ 0.193e-8■■■□□ 18
TPM4-205ENST00000586833 ZEB2O60315 1214 aa16.21■□□□□ 0.19
TPM4-205ENST00000586833 DUSP11O75319 330 aaKnown RBP16.21■□□□□ 0.19
TPM4-205ENST00000586833 EIF3JO75822 258 aaKnown RBP16.21■□□□□ 0.19
TPM4-205ENST00000586833 STAM2O75886 525 aa16.21■□□□□ 0.19
TPM4-205ENST00000586833 DEXIO95424 95 aa16.21■□□□□ 0.19
TPM4-205ENST00000586833 XBP1P17861 261 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms